William Hersh, MDProfessor and Chair Email:
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2. Kronfol NO, Hersh WR, Barakat MM, Effects of 25(OH)-Vitamin D in hypocalcemic patients on chronic hemodialysis, Transactions of the American Society for Artificial Internal Organs, 1987, 33: 289-292.
3. Greenes RA, Tarabar DB, Krauss M, Anderson G, Wolnik WJ, Cope L, Slosser E, Hersh WR, Knowledge management as a decision support method: a diagnostic workup strategy application, Computers and Biomedical Research, 1989, 22: 113-135.
4. Greenes RA, Tarabar DB, Krauss M, Cope L, Slosser E, Hersh WR, Pattison-Gordon E, Abendroth T, Rathe R, Snydr-Michal J, Explorer-2: an object-oriented framework for knowledge management, MEDINFO 89, 1989, 29-33.
5. Hersh WR, Greenes RA, SAPHIRE: an information retrieval system featuring concept matching, automatic indexing, probabilistic retrieval, and hierarchical relationships, Computers and Biomedical Research, 1990, 23: 410-425.
6. Hersh WR, Greenes RA, Information retrieval in medicine: state of the art, M.D. Computing, 1990, 7: 302-311.
7. Hersh WR, Pattison-Gordon E, Greenes RA, Evans DA, Adaptation of Meta-1 for use in SAPHIRE, a general-purpose information retrieval system, Proceedings of the 14th Annual Symposium on Computer Applications in Medical Care, 1990, 156-160.
8. Hersh WR, Evaluation of Meta-1 for a concept-based approach to the automated indexing and retrieval of bibliographic and full-text databases, Medical Decision Making, 1991,11: S120-124.
9. Evans DA, Hersh WR, Monarch IA, Lefferts RG, Handerson SK, Automatic indexing of abstracts via natural language processing using a simple thesaurus, Medical Decision Making, 1991, 11: S108-S115.
10. Hersh WR, Hickam DH, Haynes RB, McKibbon KA, Evaluation of SAPHIRE: an automated approach to indexing and retrieving medical literature, Proceedings of the 15th Annual Symposium on Computer Applications in Medical Care, 1991, 808-812.
11. Hersh WR, Hickam DH, A comparative analysis of retrieval effectiveness for three methods of indexing medical literature, American Journal of the Medical Sciences, 1992, 303: 293-300.
12. Hersh WR, Evans DA, Monarch IA, Lefferts RG, Handerson SK, Gorman PN, Indexing effectiveness of linguistic and non-linguistic approaches to automated indexing, MEDINFO 92, 1992, 1402-1408.
13. Evans DA, Chute CG, Handerson SK, Yang Y, Monarch IA, Hersh WR, Mapping vocabularies using “latent semantics,” MEDINFO 92, 1992, 1462-1468.
14. Hersh WR, Hickam DH, Leone TJ, Words, concepts, or both: optimal indexing units for automated information retrieval, Proceedings of the 16th Annual Symposium on Computer Applications in Medical Care, 1992, 644-648.
15. Hersh WR, Hickam DH, A comparison of two methods for indexing and retrieval from a full-text medical database, Medical Decision Making, 1993, 13: 220-226.
16. Hersh WR, Hickam DH, Haynes RB, McKibbon KA, A performance and failure analysis of SAPHIRE with a MEDLINE test collection, Journal of the American Medical Informatics Association, 1994, 1: 51-60.
17. Hersh WR, Relevance and retrieval evaluation: perspectives from medicine, Journal of the American Society for Information Science, 1994, 45: 201-206.
18. Evans DA, Cimino JJ, Hersh WR, Huff SM, Bell DS, Toward a medical concept representation language, Journal of the American Medical Informatics Association, 1994, 1: 207-217.
19. Hersh WR, Buckley C, Leone TJ, Hickam DH, OHSUMED: an interactive retrieval evaluation and new large test collection for research, Proceedings of the 17th Annual ACM SIGIR Conference on Research and Development in Information Retrieval , 1994, 192-201.
20. Hersh WR, Hickam DH, Use of a multi-application computer workstation in a clinical setting, Bulletin of the Medical Library Association, 1994, 82: 382-389.
21. Hersh WR, Elliot DE, Hickam DH, Wolf SL, Molnar A, Leichtenstein C, Towards new measures of information retrieval evaluation, Proceedings of the 18th Annual Symposium on Computer Applications in Medical Care , 1994, 895-899. (Also published in Proceedings of the 18th Annual ACM SIGIR Conference on Research and Development in Information Retrieval, 1995, 164-170.)
22. Friedman C, Huff SM, Hersh WR, Gordon EP, and Cimino JJ, The Canon Group's effort: working toward a merged model, Journal of the American Medical Informatics Association, 1995, 2: 4-18.
23. Hersh WR, Hickam DH, An evaluation of interactive Boolean and natural language searching with an on-line medical textbook, Journal of the American Society for Information Science, 1995, 46: 478-489.
24. Hersh WR, Hickam DH, Information retrieval in medicine: the SAPHIRE experience, Journal of the American Society for Information Science, 1995, 46: 743-747.
25. Hersh WR, The electronic medical record: promises and problems, Journal of the American Society for Information Science, 1995, 46: 772-776.
26. Hersh WR, Leone TJ, The SAPHIRE server, Proceedings of the 19th Annual Symposium on Computer Applications in Medical Care, 1995, 858-862.
27. Hersh WR, Pentecost J, Hickam DH, A task-oriented approach to retrieval evaluation, Journal of the American Society for Information Science, 1996, 47: 50-56.
28. Hersh WR, Brown KE, Donohoe LC, Campbell EM, Horacek AE, CliniWeb: managing clinical information on the World Wide Web, Journal of the American Medical Informatics Association, 1996, 3: 273-280.
29. Hersh WR, Campbell EM, Evans DA, Brownlow ND, Empirical, automated vocabulary discovery using large text corpora and advanced natural language processing tools, Proceedings of the 1996 AMIA Annual Symposium, 1996, 159-163.
30. Ertle AR, Campbell EM, Hersh WR, Automated application of clinical practice guidelines for asthma management, Proceedings of the 1996 AMIA Annual Symposium, 1996, 552-556.
31. Evans DA, Brownlow ND, Hersh WR, Campbell EM, Automating concept identification in the electronic medical record: an experiment in extracting dosage information, Proceedings of the 1996 AMIA Annual Symposium, 1996, 388-392.
32. Spackman KA, Hersh WR, Recognizing noun phrases in medical discharge summaries: an evaluation of two natural language parsers, Proceedings of the 1996 AMIA Annual Symposium, 1996, 155-158.
33. Hersh WR, Campbell EM, Malveau SE, Assessing the feasibility of large-scale natural language processing in a corpus of ordinary medical records: a lexical analysis, Proceedings of the 1997 AMIA Annual Symposium, 1997, 580-584.
34. Detmer WM, Barnett GO, Hersh WR, MedWeaver: integrating decision support, literature searching, and Web exploration using the UMLS Metathesaurus, Proceedings of the 1997 AMIA Annual Symposium, 1997, 490-494.
35. Hersh W, Leen T, Rehfuss S, Malveau S, Automatic prediction of trauma registry procedure codes from emergency room dictations, MEDINFO 98, 1998, 665-669.
36. Hersh WR, Hickam DH, How well do physicians use electronic information retrieval systems? A framework for investigation and systematic review, Journal of the American Medical Association, 1998, 280: 1347-1352.
37. Hersh WR, Information retrieval at the millenium, Proceedings of the 1998 AMIA Annual Symposium, 1998, 38-45.
38. Ash JS, Gorman PN, Hersh WR, Physician order entry in U.S. hospitals, Proceedings of the 1998 AMIA Annual Symposium, 1998, 235-239.
39. Munoz FR, Hersh WR, MCM Generator: a Java-based tool for generating medical metadata, Proceedings of the 1998 AMIA Annual Symposium, 1998, 648-652.
40. Zacks MP, Hersh WR, Developing search strategies for detecting high quality reviews in a hypertext test collection, Proceedings of the 1998 AMIA Annual Symposium, 1998, 663-667.
41. Hersh WR, Donohoe LC, SAPHIRE International: a tool for cross-language information retrieval, Proceedings of the 1998 AMIA Annual Symposium, 1998, 673-677.
42. Lowe HJ, Antipov I, Hersh WR, Smith CA, Toward knowledge-based retrieval of medical images. The role of semantic indexing, image content representation, and knowledge-based retrieval, Proceedings of the 1998 AMIA Annual Symposium, 1998, 882-886.
43. Malet G, Munoz F, Appleyard R, Hersh WR, A model for enhancing Internet medical document retrieval with “medical core metadata,” Journal of the American Medical Informatics Association, 1999, 6: 183-208.
44. Hersh WR, “A world of knowledge at your fingertips”: promise, reality, and future directions, Academic Medicine, 1999, 74: 30-33.
45. Ash JS, Hersh WR, Krages KP, Morgan JE, Schumacher R, The Oregon IAIMS: then and now, Bulletin of the Medical Library Association, 1999, 37: 347-349.
46. Hersh W, Price S, Kraemer D, Chan B, Sacherek L, Olson D, System and user attributes associated with successful searching, Advances in Digital Libraries ’99, 1999, 60-70.
47. Lowe HJ, Antipov I, Hersh WR, Smith CA, Representing images in the multimedia electronic medical record combining semantic indexing and image content-based representation to support knowledge-based retrieval of medical images, Methods of Information in Medicine, 1999, 38: 303-307.
48. Hersh W, Ball A, Day B, Masterson M, Zhang L, Sacherek L, Maintaining a catalog of manually-indexed, clinically-oriented World Wide Web content, Proceedings of the 1999 AMIA Annual Symposium, 1999, 790-794.
49. Price S, Hersh W, Filtering Web pages for quality indicators: an empirical approach to finding high quality consumer health information on the World Wide Web, Proceedings of the 1999 AMIA Annual Symposium, 1999, 911-915.
50. Caton K, Hersh W, Williams J, Implementation and evaluation of a virtual learning center for distributed education, Proceedings of the 1999 AMIA Annual Symposium, 1999, 491-495.
51. Ash JS, Gorman PN, Hersh WR, Poulsen SB, Perceptions of house officers who use physician order entry, Proceedings of the 1999 AMIA Annual Symposium, 1999, 471-475.
52. Stead WW, Miller RA, Musen M, Hersh W, Integration and beyond: linking information from disparate sources and into workflow, Journal of the American Medical Informatics Association, 2000, 7: 135-145.
53. Hersh W, Turpin A, Price S, Kraemer D, Chan B, Sacherek L, Olson D, Do batch and user evaluations give the same results?, Proceedings of the 23rd Annual ACM SIGIR Conference on Research and Development in Information Retrieval, 2000, 17-24.
54. Hersh WR, Crabtree MK, Hickam DH, Sacherek L, Rose L, Friedman CP, Factors associated with successful answering of clinical questions using an information retrieval system, Bulletin of the Medical Library Association, 2000, 88: 323-331.
55. Hersh WR, Price S, Donohoe L, Assessing thesaurus-based query expansion using the UMLS Metathesaurus, Proceedings of the 2000 Annual AMIA Fall Symposium, 2000, 344-348.
56. Selsky D, Eisenberg F, Spena R, Hersh W, Price S, Buitendijk I, Knowledge integration: insight through the e-Portal, Journal of Healthcare Information Management, 2001, 15: 13-24.
57. Hersh W, Turpin A, Price S, Kraemer D, Sacherek L, Olson D, Chan B, Challenging conventional assumptions of information retrieval with real users: Boolean searching and batch retrieval evaluations, Information Processing & Management, 2001, 37: 383-402.
58. Turpin A, Hersh W, Why batch and user evaluations do not give the same results, Proceedings of the 24th Annual ACM SIGIR Conference on Research and Development in Information Retrieval, 2001, 225-231.
59. Hersh WR, Junium K, Mailhot M, Tidmarsh P, Implementation and evaluation of a medical informatics distance learning program, Journal of the American Medical Informatics Association , 2001, 8: 570-584.
60. Hersh WR, Helfand M, Wallace JA, Kraemer DF, Patterson PK, Shapiro SE, Greenlick MR, Clinical outcomes resulting from telemedicine interventions: a systematic review, BMC Medical Informatics & Decision Making, 2001, 1:5.
61. Hersh WR, Mailhot MF, Lowe HJ, Smith CA, Selective automated indexing of findings and diagnoses in radiology reports, Journal of Biomedical Informatics, 2001, 34: 262-273.
62. Hersh WR, Medical informatics education: an alternative pathway for training the informationist, Journal of the Medical Library Association, 2002, 90: 76-79.
63. Hersh WR, Crabtree MK, Hickam DH, Sacherek L, Friedman CP, Tidmarsh P, Moesbaek C, Kraemer D, Factors associated with success for searching MEDLINE and applying evidence to answer clinical questions, Journal of the American Medical Informatics Association, 2002, 9: 283-293.
64. Overhage JM, Middleton B, Miller R, Zielstorff, RD, Hersh WR, Does national regulatory mandate of provider order entry, to take effect by the end of 2005, portend greater benefit than risk for health care delivery? The 2001 ACMI debate, Journal of the American Medical Informatics Association, 2002, 9: 199-208.
65. Hersh WR, Helfand M, Wallace JA, Kraemer DF, Patterson PK, Shapiro SE, Greenlick MR, A systematic review of the efficacy of telemedicine for making diagnostic and management decisions, Journal of Telemedicine and Telecare, 2002, 8: 197-209.
66. Hersh WR, Gorman PN, Ruback T, Implementation and evaluation of a medical informatics curriculum for physician assistant students, Perspective on Physician Assistant Education, 2002, 13: 7-10.
67. Hersh WR, Medical Informatics: improving health care through information, Journal of the American Medical Association, 2002, 288: 1955-1958.
68. Hersh W,
Miller R, Olson, D, Sacherek L, Cross P, Professional’s Information Link (PiL): a
web-based asynchronous consultation service, Proceedings
of the 2002 Annual AMIA Symposium, 2002, 325-329.
69. Tidmarsh P, Cummings J, Hersh WR, Friedman CP, Distributed medical informatics
education using Internet2, Proceedings of the 2002
Annual AMIA Symposium, 2002, 787-791.
70. Price SL, Hersh WR, Olson DD, Embi PJ, SmartQuery: context-sensitive links to
medical knowledge sources from the electronic patient record,
Proceedings of the 2002 Annual AMIA Symposium, 2002,
627-631.
71. Dubay CJ, Brundege JM, Hersh W, Spackman K, Delivering bioinformatics
training: bridging the gaps between computer science and
biomedicine, Proceedings of the 2002 Annual AMIA
Symposium, 2002, 220-224.
72. Huang Y,
Lowe HJ, Hersh WR, A pilot study of contextual UMLS indexing to
improve the precision of concept-based representation in
XML-structured clinical radiology reports, Journal of the
American Medical Informatics Association, 2003, 10: 580-587.
73. Turpin A, Hersh W, Do clarity
scores for queries correlate with user performance?, Proceedings
of the Fifteenth Australasian Database Conference, Dunedin,
New Zealand, 2004, 85-91.
74. Ash JS, Gorman PN, Seshadri V, Hersh WR, Computerized
physician order entry in U.S. hospitals: results of a 2002 survey,
Journal of the American Medical Informatics Association,
2004, 11: 95-99.
75. Cohen AM, Stavri PZ, Hersh WR, A
categorization and analysis of the criticisms of Evidence-Based
Medicine, International Journal of Medical Informatics,
2004, 73: 35-43.
77. Tran D, Dubay C, Gorman P, Hersh W, Applying task analysis to
describe and facilitate bioinformatics tasks, MEDINFO 2004, 818-822.
78. Tian X, Hersh W, Logan J, Bennett R, A database for Chinese
outpatients with rheumatic diseases, MEDINFO 2004, 256-259.
79. Cohen AM, Hersh WR, A survey
of current work in biomedical text mining, Briefings in Bioinformatics,
2005, 6: 57-71.
80. Cohen AM, Hersh WR, Dubay C, Spackman KA, Using
co-occurrence network structure to extract synonymous gene and
protein names from MEDLINE abstracts. BMC Bioinformatics, 2005, 6:
103.
81. Müller H, Clough P, Hersh W, Geissbuhler A, IMAGECLEF 2004–2005: results,
experiences and new ideas for image retrieval evaluation, CBMI 2005 - Fourth International
Workshop on Content-Based Multimedia Indexing, 2005.
82. Hersh W, Evaluation
of biomedical text mining systems: lessons learned from
information retrieval, Briefings
in Bioinformatics, 2005, 6: 344-356.
83. Müller H, Clough P, Hersh W, Deselaers T, Lehmann T,
Geissbuhler A, Evaluation axes
for medical image retrieval systems the ImageCLEF experience,
ACM Multimedia 2005,
2005.
84. Bernstam EV, Herskovic JR, Aphinyanaphongs
Y, Aliferis CF, Sriram MG, Hersh WR, Using citation data to improve
retrieval from MEDLINE, Journal
of the American Medical Informatics Association, 2006,
13: 96-105.
85. Hersh W, Who are the
informaticians? What we know and should know, Journal of the American Medical
Informatics Association, 2006, 13: 166-170.
86. Cohen AM, Hersh WR, Peterson K, Yen PY, Reducing workload in systematic
review preparation using automated citation classification,
Journal of the American Medical
Informatics Association, 2006, 13: 206-219.
87. Müller H, Clough P, Hersh W, Deselaers T, Lehmann T,
Geissbuhler A, Using
heterogeneous annotation and visual information for the
benchmarking of image retrieval systems, SPIE Conference Photonics West,
2006.
2. Evans DA, Lefferts RG, Grefenstette G, Handerson SK, Hersh WR, Archbold AA, CLARIT TREC Design, Experiments, and Results, Proceedings of the First Text Retrieval Conference (TREC-1), 1993, 251-286.
3. Hersh WR, Lunin LA, Perspectives on medical informatics: information technology in health care, Journal of the American Society for Information Science, 1995, 46: 726-728.
4. Hersh WR, Day B, A comparison of Boolean and natural language searching for the TREC-6 interactive task, Proceedings of the Sixth Text Retrieval Conference (TREC-6), Gaithersburg, MD, 1998, 585-595.
5. Hersh W, Price S, Kraemer D, Chan B, Sacherek L, Olson D, A large-scale comparison of Boolean and natural language searching for the TREC-7 interactive track, Proceedings of the Seventh Text Retrieval Conference (TREC-7), Gaithersburg, MD, 1999, 491-500.
6. Hersh WR, OHSU’s 2-for-1 proposition: the fusion of medical informatics and outcomes research, M.D. Computing, 1999, 16(5): 35-37.
7. Hersh W, Over P, TREC-8 interactive track overview, Proceedings of the Eighth Text Retrieval Conference (TREC-8), Gaithersburg, MD, 2000, 57-64.
8. Hersh WR, The quality of information on the World Wide Web, Journal of the American College of Dentists, 1999, 66: 43-45.
9. Hersh W, Turpin A, Sacherek L, Olson D, Price S, Further analysis of whether batch and user evaluations give the same results with a question-answering task, Proceedings of the Ninth Text Retrieval Conference (TREC-9), Gaithersburg, MD, 2001, 407-416.
10. Hersh W,
Over P,
SIGIR workshop on interactive retrieval at TREC and beyond,
SIGIR Forum, Spring 2000.
11. Hersh W, Over P, TREC 2001 interactive track structure,
Proceedings of the Text Retrieval Conference (TREC) 2001,
Gaithersburg, MD, 38-41.
12. Hersh W, Sacherek L, Olson D, Observations of searchers:
OHSU TREC 2001 interactive track, Proceedings of the Text
Retrieval Conference (TREC) 2001, Gaithersburg, MD, 434-441.
13. Hersh W,
Medical Informatics: a career for librarians, Info
Career Trends, 2002.
14. Hersh W,
Over P, TREC 2002 interactive track report, Proceedings of the
Text Retrieval Conference (TREC) 2002, Gaithersburg, MD,
40-45.
15. Hersh W, Sacherek L, Olson D, More statistical power
needed: The OHSU TREC 2002 interactive track experiments,
Proceedings of the Text Retrieval Conference (TREC) 2002,
Gaithersburg, MD, 505-511.
16. Hersh WR,
Bhupatiraju RT, TREC genomics
track overview, The Twelfth Text Retrieval Conference -
TREC 2003, 14-23.
17. Hersh WR, Bhupatiraju RT, Price SL, Phrases, boosting, and
external knowledge resources for genomic information retrieval,
The Twelfth Text Retrieval Conference - TREC 2003,
503-509.
18. Hersh W, Anytime, anywhere medical records: the National Health Information Infrastructure (NHII), Oregon’s Future, 2004, 5(1): 36-38.
19. Hersh W, It takes a village to achieve the benefits of electronic health records, Oregon’s Future, 2004, 5(2): 40-41.
20. Hersh W, Bhupatiraju RT, Ross L, Johnson P, Cohen AM, Kraemer DF, TREC 2004 genomics track overview, The Thirteenth Text Retrieval Conference - TREC 2004, 13-24.
21. Cohen AM, Bhupatiraju RT, Hersh W, Feature generation, feature selection, classifiers, and conceptual drift for biomedical document triage, The Thirteenth Text Retrieval Conference - TREC 2004.
22. Hersh W, Distance learning in biomedical informatics. ACM eLearn Magazine, 2004.
23. Hersh W, The
full spectrum of biomedical informatics education at OHSU, Proceedings of the European
Federation of Medical Informatics Special Topic Conference
2005, 49-51.
24. Hersh WR, Jensen J, Müller H, Ruch P, Gorman P, A qualitative task analysis of
biomedical image use and retrieval, Proceedings of the Workshop on
Image and Video Retrieval Evaluation, 2005, 11-16.
25. Jensen JR, Hersh WR, Manual
query modification and data fusion for medical image retrieval,
in Peters C, Gey FC, Gonzalo J, Müller H, Jones GJF, Kluck M,
Magnini B, de Rijke M, Accessing
Multilingual Information Repositories: 6th Workshop of the
Cross-Language Evaluation Forum, CLEF 2005, Springer
Lecture Notes in Computer Science, Vol. 4022, 673-679.
26. Clough P, Müller H, Deselaers T, Grubinger M, Lehmann,
Jensen J, Hersh W, The CLEF 2005
Cross-Language Image Retrieval Track, in Peters C, Gey FC,
Gonzalo J, Müller H, Jones GJF, Kluck M, Magnini B, de Rijke M,
Accessing Multilingual
Information Repositories: 6th Workshop of the Cross-Language
Evaluation Forum, CLEF 2005, Springer Lecture Notes in
Computer Science, Vol.
4022, 535-557.
27. Hersh W, Cohen AM, Yang J, Bhupatiraju RT, Roberts P, M.
Hearst M, TREC 2005 genomics
track overview, The
Fourteenth Text Retrieval Conference - TREC 2005.
28. Cohen AM, Yang J, Hersh WR, A
comparison of techniques for classification and ad hoc
retrieval of biomedical documents, The Fourteenth Text Retrieval
Conference - TREC 2005.
29. Hersh W, What is the right
medical informatics training for me? - a case study from
Oregon Health & Science University, in e-Health & Medical IT
Solutions, 2006.
30. Hersh W, Kim
E, The impact of relevance
judgments and data fusion on results of image retrieval test
collections, Proceedings
of the Second MUSCLE/ImageCLEF Workshop on Image and Video
Retrieval Evaluation, 2006, 29-38.
31. Hersh W, Kalpathy-Cramer J, Jensen J, Medical image retrieval and
automated annotation: OHSU at ImageCLEF 2006, in Peters C,
Clough P, Gey F, Karlgren J, Magnini B, Oard DW, de Rijke M,
Stempfhuber M, Evaluation of
Multilingual and Multi-modal Information Retrieval - 7th
Workshop of the Cross-Language Evaluation Forum, CLEF 2006,
Springer Lecture Notes in Computer Science, Vol. 4730,
660-669.
32. Müller H, Deselaers T, Lehmann, Clough P, Kim E, Hersh W, Overview of the ImageCLEFmed 2006 medical retrieval and annotation tasks, in Peters C, Clough P, Gey F, Karlgren J, Magnini B, Oard DW, de Rijke M, Stempfhuber M, Evaluation of Multilingual and Multi-modal Information Retrieval - 7th Workshop of the Cross-Language Evaluation Forum, CLEF 2006, Springer Lecture Notes in Computer Science, Vol. 4730, 595-608.
33. Hersh W,
Cohen AM, Roberts P, Rekapalli HP, TREC 2006 Genomics Track overview,
The Fifteenth Text Retrieval Conference - TREC 2006.
34. Cohen AM, Yang J, Fisher S, Roark B, Hersh WR, Combining lexicon expansion, information retrieval, and cluster-based ranking for biomedical question answering, The Fifteenth Text Retrieval Conference - TREC 2006, 52-78.
35. Hersh W,
Müller H, Image
retrieval
in medicine: the ImageCLEF medical image retrieval evaluation,
ASIST Bulletin, February/March 2007.
36. Hersh W. Copy and paste. AHRQ WebM&M, July/August 2007.
37. Hersh WR, Müller H, Kalpathy-Cramer J, Kim E, Consolidating the ImageCLEF medical task test collection: 2005-2007, Proceedings of the Third MUSCLE/ImageCLEF Workshop on Image and Video Retrieval Evaluation, 2006, 31-39.
38. Müller H,
Deselaers T, Kim E, Kalpathy-Cramer J, Deserno TM, Hersh W, Overview of the ImageCLEF 2007 medical
retrieval and annotation tasks, in Peters C, Jijkoun
V. Mandl T, Müller H, Oard DW, Peňas A, Petras V, Santos
D, Advances in Multilingual
and Multimodal Information Retrieval, 8th Workshop of
the Cross-Language Evaluation Forum, CLEF 2007,
Budapest, Hungary, Springer Lecture Notes for Computer Science,
Vol. 5152, 2008, 472-491.
39. Kalpathy-Cramer J, Hersh W, Medical
image retrieval and automatic annotation: OHSU at ImageCLEF
2007, in Peters C, Jijkoun V. Mandl T, Müller H, Oard DW,
Peňas A, Petras V, Santos D, Advances
in Multilingual and Multimodal Information Retrieval,
8th Workshop of the Cross-Language Evaluation Forum,
CLEF 2007, Budapest, Hungary, Springer Lecture Notes
for Computer Science, Vol. 5152, 2008, 623-630.
40. Hersh W,
Cohen AM, Ruslen L, Roberts P, TREC
2007 Genomics Track overview, The Sixteenth Text Retrieval Conference - TREC 2007,
37-50.
41. Cohen AM, Yang J, Fisher S, Roark B, Hersh WR, The OHSU biomedical question answering
system framework, The
Sixteenth Text Retrieval Conference - TREC 2007.
42. Hersh W, A View from the States: Biomedical Informatics
Education at Oregon Health & Science University, UK Health Informatics Today,
No. 56, Spring, 2008, 3-5, http://www.bmis.org/ebmit/2008_56_spring.pdf.
43. Hersh WR, Wright A, Characterizing
the Health Information Technology Workforce: Analysis from the
HIMSS Analytics™ Database, 2008, http://www.billhersh.info/hit-workforce-hersh.pdf.
44. Hersh WR, Margolis A, Quirós F, Otero P, Determining Health Informatics Workforce Needs in Developing Economies, Making the eHealth Connection: Global Partnerships, Local Solutions, 2008, Bellagio, Italy.
45. Müller H,
Kalpathy-Cramer J, Kahn C, Hatt W, Bedrick S, and Hersh W, Overview of the ImageCLEFmed 2008
medical image retrieval task, in Peters C, Giampiccol D,
Ferro N, Petras V, Gonzalo J, Penas A, Deselaers T, Mandl T,
Jones G, Kurimo, M, Evaluating
Systems
for Multilingual and Multimodal Information Access, 9th
Workshop of the Cross-Language Evaluation Forum, CLEF 2008,
Lecture Notes in Computer Science, Vol. 5706, 512-522.
46. Kalpathy-Cramer J, Bedrick S, Hatt W, and Hersh W, Multimodal medical image
retrieval OHSU at ImageCLEF 2008, in Peters C, Giampiccol
D, Ferro N, Petras V, Gonzalo J, Penas A, Deselaers T, Mandl T,
Jones G, Kurimo, M, Evaluating
Systems for Multilingual and Multimodal Information Access,
9th Workshop of the Cross-Language Evaluation Forum, CLEF 2008,
Lecture Notes in Computer Science, Vol. 5706, 744-751.
47. Müller H, Kalpathy-Cramer J, Eggel I, Bedrick S, Radhouani
S, Bakke B, Kahn CE, Hersh W, Overview
of the CLEF 2009 Medical Image Retrieval Track, Working Notes for the CLEF 2009
Workshop.
48. Radhouani S, Kalpathy-Cramer J, Bedrick S, Bakke B, Hersh W,
Multimodal medical image
retrieval: improving precision at ImageCLEF 2009, Working Notes for the CLEF 2009
Workshop.
49. Müller H,
Kalpathy-Cramer J, Eggel I, Bedrick S, Reisetter J, Kahn CE, Overview
of the CLEF 2010 Medical Image Retrieval Track, Notebook
Papers for the CLEF 2010 Labs and Workshops, Padua, Italy.
50. Bedrick S, Ambert K, Cohen A, Hersh W, Identifying
patients for clinical studies from electronic health records:
TREC Medical Records Track at OHSU, The Twentieth Text
Retrieval Conference - TREC 2011.
51. Voorhees E, Hersh W, Overview of
the TREC 2012 Medical Records Track, The 21st Text
Retrieval Conference - TREC 2012.
52. Bedrick S, Edinger T, Cohen A, Hersh W, Identifying patients for clinical
studies from electronic health records: TREC 2012 Medical
Records Track at OHSU, The 21st Text Retrieval
Conference - TREC 2012.
53. Kodish-Wachs
J, Hersh W, Clinical
informatics in rehabilitation practice, PM&R
Knowledge Now, 2013.
54. Hersh WR, Valerius JD, A tale
of two professions: health information management and
biomedical/health informatics converge at OHSU, Journal
of AHIMA, 2013, 84(10): 38-41.
55. Simpson MS,
Voorhees E, Hersh W, Overview
of the TREC 2014 Clinical Decision Support Track, The
23rd Text Retrieval Conference - TREC 2014.
56. Roberts K, Simpson MS, Voorhees E, Hersh WR, Overview
of the TREC 2015 Clinical Decision Support Track, The
24th Text Retrieval Conference - TREC 2015.
57. Roberts K, Demner-Fushman D, Voorhees E, Hersh WR, Overview
of the TREC 2016 Clinical Decision Support Track, The
25th Text Retrieval Conference - TREC 2016.
58. Pederson B,
Vasilevsky N, Hersh W, McWeeney S, Haendel M, Wirz J. Big Data
to Knowledge open educational resources: development and
dissemination considerations, Proceedings of EdMedia: World
Conference on Educational Media and Technology 2016,
1729-1733.
59. Roberts K,
Demner-Fushman D, Voorhees EM, Hersh WR, Bedrick S, Lazar AJ,
Pant S, Overview of the TREC 2017
Precision Medicine Track, The 26th Text Retrieval
Conference - TREC 2017.
60. Roberts K,
Demner-Fushman D, Voorhees EM, Hersh WR, Bedrick S, Lazar
AJ, Overview of the TREC 2018
Precision Medicine Track, The 27th Text Retrieval
Conference - TREC 2018.
2. Lindell CK,
Hersh WR, Internet Medical & Health Searching &
Sources Guidebook, Osceola, WI: KC Press. - 1st
Edition, 1998
- 2nd Edition, 1999
- 3rd (Millenium) Edition, 2000
- 4th Edition, 2001
- 5th Edition, 2002
3. Chen H,
Fuller S, Friedman C, Hersh W (eds.), Medical Informatics:
Knowledge Management and Data Mining in Biomedicine, New
York: Springer-Verlag, 2005.
4. Hoyt, RE and
Hersh, WR, Eds. (2018). Health
Informatics: Practical Guide, Seventh Edition. Pensacola,
FL, Lulu.com.
2. Hersh W, Rindfleisch T, Electronic publishing of scholarly communication in the biomedical sciences, Journal of the American Medical Informatics Association, 2000, 7: 324-325.
3. Hersh W, Over P, Interactivity at the Text Retrieval Conference (TREC), Information Processing and Management, 2001, 37: 365-367.
4. Hersh WR, Patterson PK, Kraemer DF, Telehealth: the need for evaluation redux, Journal of the American Medical Informatics Association , 2001, 9: 89-90.
5. Hersh WR,
Gorman PN, Teach globally, learn
locally: the 2003 IMIA Working Group on Education Meeting, International
Journal of Medical Informatics, 2004, 73: 95-96.
6. Cohen AM,
Hersh WR, Criticisms of evidence-based
medicine, Evidence-Based
Cardiovascular Medicine, 2004, 8: 197-198.
7. Hersh W, Health care information technology:
progress and barriers, Journal
of the American Medical Association, 2004, 292:
2273-2274.
8. Hersh W, Ubiquitous but unfinished: on-line
information retrieval systems, Medical Decision Making, 2005, 25: 147-148.
2. Hersh, WR, Hickam DH, Impact of a computerized information system in a university general medicine clinic, Clinical Research, 1992, 40: 567A.
3. Zacks M, Hersh W, Indexing the Cochrane systematic reviews, Colloquium Handbook, Fourth International Cochrane Colloquium, Adelaide, Australia, 1996, A-19.
4. Brodner R, Hersh W, Helfand M, Brown B, ORCAS: network-based management of cancer clinical trials, Proceedings of the 1997 AMIA Annual Symposium, 1997, 915.
5. Lowe HJ, Hersh W, Smith CA, The multimedia medical record as a virtual library: a multidimensional model for indexing the content of medical images using the Unified Medical Language System, Final Program and Abstract Book, 1998 AMIA Annual Spring Congress, 1998, 83.
6. Hersh WR, Price S, Identifying randomized controlled trials in conference proceedings abstracts. Abstract Book, Sixth International Cochrane Colloquium, 1998, 52.
7. Hersh WR, Malveau SE, DynamiQuest: a system for asking clinical examination questions based on content viewed, Proceedings of the 1998 AMIA Annual Symposium, 1998, 1013.
8. Huey CG, Hersh WR, A needs assessment of a web-based smoking cessation program, Proceedings of the 1998 AMIA Annual Symposium, 1998, 1020.
9. Rose LL, Crabtree K, Hersh WR, Factors influencing successful use of information retrieval systems by nurse practitioner students, Proceedings of the 1998 AMIA Annual Symposium, 1998, 1067.
10. Hersh W, Zhang L, Teaching English medical terminology using the UMLS Metathesaurus and World Wide Web, Proceedings of the 1999 AMIA Annual Symposium, 1999, 1078.
11. Patterson PK, Salveson C, Hersh W, Duell PB, Carlson J, Videophones for wellness coaching in an overweight population, Proceedings of the 1999 AMIA Annual Symposium, 1999, 1136.
12. Hersh WR, Web-based distance learning in medical informatics, Conference Notebook: Blending People & Technology to Improve Practice - Conference on Public Health Informatics & Distance Learning, New Orleans, LA, 2000.
13. Lyman JA,
Hersh W, Spackman K, Representing
clinical information in an internal medicine teaching image
database, Proceedings of the 2000 Annual AMIA Symposium,
2000, 1074.
14. Hersh W,
Distance learning techniques for medical informatics, Proceedings
of the 2000 Annual AMIA Symposium, 2000, 1170. PMC2243969.
15. Hersh WR,
Helfand M, Shapiro SE, Wallace JA, Eilers GM, Coverage and quality
of diagnostic and outcomes studies of telemedicine services,
Abstract Book, Eighth International Cochrane Colloquium,
2000, 49.
16. Gong Y, Hersh W, A preliminary trial of tagging on-line documents using “Medical Core Metadata”, Proceedings of the 2001 AMIA Annual Symposium, 914.
17. Cummings J, Tidmarsh P, Hersh W, Friedman C, Distributed medical informatics education using Internet2, Proceedings of the 2001 AMIA Annual Symposium, 887.
18. Price S, Logan J, Hersh W, The role of computer science and computing skills in a medical informatics curriculum, Proceedings of the 2001 AMIA Annual Symposium, 1003.
19. Hiruki T, Olson D, Onogi Y, Hersh W, An automated MeSH mapping tool to facilitate searching of the English-language Web by Japanese users, Technology and Health Care, 2001, 9: 495-496.
20. Turpin A,
Hersh W, User interface effects in past batch versus user
experiments, Proceedings of the 25th Annual ACM SIGIR
Conference on Research and Development in Information Retrieval,
2002, 431-432.
21. Hersh WR, Text Retrieval Conference (TREC) Genomics Pre-Track,
Pacific Symposium on Biocomputing, 2003, 83.
22. Hersh W,
Tidmarsh P, Ilg A, Distance learning in medical informatics:
who, what, and why?, Proceedings of the 2003 International
Medical Informatics Association Working Group on Education
Conference, 2003, CD-ROM.
23. Yackel TR, Gorman P, Ilg A, Ash J, Audiss D, Hersh W, Teaching
applied informatics: the benefits of an internship model, Proceedings
of the 2003 International Medical Informatics Association
Working Group on Education Conference, 2003, CD-ROM.
24. Rose E,
Zeiger R, Corley S, Gorman P, Yackel T, Hersh W, Development methodology for a “next
generation” medical informatics curriculum for clinicians, Proceedings
of the 2003 AMIA Annual Symposium, 986.
25. Hersh WR,
Bhupatiraju RT, Greene PS, Smothers V, Cohen C, A standards-based approach for
facilitating discovery of learning objects at the point of care,
Proceedings of the AMIA 2005
Annual Symposium, CD-ROM.
26. Yang J,
Cohen AM, Hersh WR, Functional gene group summarization by
clustering MEDLINE abstract sentences, Proceedings of the AMIA 2006 Annual Symposium,
CD-ROM.
27. Hersh WR,
Bhupatiraju RT, Greene PS, Smothers V, Cohen C, Frodis M, Mapping
and accessing competencies and learning objects, Slice of Life 2007, http://slice.utah.edu/2007/schedule/documents/53WilliamHersh1.pdf.
28. Feldman S, Hersh W, Evaluating the AMIA-OHSU 10x10 program to
train health care professionals, Proceedings of the AMIA 2007 Annual Symposium,
2007, CD-ROM.
29. Hersh W, Kalpathy-Cramer J, Müller H, The ImageCLEFmed medical
image retrieval task test collection, Society for Imaging Informatics in Medicine (SIIM) 2008
Scientific Abstract Book, 2008, 13-15.
30.
Kalpathy-Cramer J, Hersh W, Bedrick S, Müller H, Query analysis to
improve medical image retrieval, Society for Imaging Informatics in Medicine (SIIM) 2008
Scientific Abstract Book, 2008, 127-128.
31. Hersh WR, Wright A, Characterizing the health information
technology workforce: Analysis from the HIMSS Analytics™ Database,
AMIA Spring Congress 2008,
CD-ROM.
32. Valerius J, Hersh W, How well
does a biomedical informatics curriculum map to health
information management knowledge clusters? Analysis of a program,
Proceedings of the AMIA 2008
Annual Symposium, 2008, 967.
33. Kahn CE, Kalpathy-Cramer J, Hersh WR, Image retrieval in
medicine: the ImageCLEF challenge, RSNA 94th Scientific Assembly and Annual Meeting,
2008.
34. McClay J,
Nielson J, Wadman M, Hersh W, The Emergency Informatics Transition
Course: a flexible, on-line course in health informatics for
emergency medicine clinicians and trainees, Innovations in Emergency Medicine
Education 2009 Annual Meeting, 2009.
35. Kalpathy-Cramer J, Bedrick S, Radhouani S, Hersh W, Eggel I,
Müller H, Web-based medical image retrieval systems: a
demonstration of the utility of text, images, and user input in
retrieving relevant images, MEDINFO
2010.
36. Mohan V,
Hersh WR, Development and evaluation of an electronic health
record configuration and customization laboratory course for
clinical informatics students, MEDINFO 2013.
37. Williamson
J, Safran C, Shortliffe EH, Starren J, Hersh W, The new clinical
informatics medical subspecialty in the United States, Studies
in Health Technology and Informatics, 2013, 192: 1232.
38. Hersh W, Williamson J, Otero P, Margolis A, The AMIA 10×10
("Ten by Ten") program: an international approach to building
informatics capacity, Studies in Health Technology and
Informatics, 2013, 192: 1233.
39. Margolis A, Joglar F, de Quirós FG, Baum A, Fernández A,
García S, Arredondo AL, Hersh WR, 10x10 comes full circle: Spanish
version back to United States in Puerto Rico, Studies in
Health Technology and Informatics, 2013, 192: 1134.
40. Mejicano G, Boudrot T, Brunett P, Bumsted T, Carney P, Deiorio
N, Hersh W, Ito T, Kahl L, Preparing future physicians: a bold
proposal for Oregon and beyond, Harvard Macy Institute 20th
Anniversary Symposium, 2014.
41. Haendel M, Dorr DA, Hersh W, Vasilevsky N, McWeeney S,
Improving knowledge discovery through development of a big data to
knowledge skills course, OHSU Research Week, Portland, OR,
2015.
42. Hersh W, McWeeney S, Haendel M, Vasilevsky N. Open educational
resources for big data science. improving knowledge discovery
through development of a big data to knowledge skills course. OHSU
Research Week, Portland, OR, 2015.
43. Hersh W, Haendel M, McWeeney S, Vasilevsky N, Pederson B, Wirz
J, Open
educational resources for big data science: goals and challenges,
NIH Big Data to Knowledge (BD2K) All-Hands Meeting,
Bethesda, MD, 2015.
44. Dorr D, Haendel M, Vasilevsky N, Pederson B, Wirz J, Hersh W,
McWeeny S. Improving knowledge discovery through development of
big data to knowledge skills course, NIH Big Data to Knowledge
(BD2K) All-Hands Meeting, Bethesda, MD, 2015.
45. Vasilevsky N, Wirz J, Pederson B, Laderas T, McWeeney S, Hersh
W, Dorr D, Haendel M. Data
science education resources for everyone, Medical
Library Association Pacific Northwest Chapter Meeting,
Portland, OR, 2016.
46. Timmons T, Hersh W, Wu S, Creating topics for cohort
identification in patient-level information retrieval, 4th
Pacific Northwest Regional NLP Workshop: NW-NLP 2016, 2016.
47. Vasilevsky N, McWeeney S, Hersh S, Dorr DA, Laderas T, Wirz J,
Pederson B, Haendel M. Improving
knowledge discovery through development of big data to knowledge
skills courses and open educational resources, OHSU BICC
25th Year Anniversary, Portland, OR, 2016.
48. Laderas T, Vasilevsky N, Haendel M, McWeeney S, Dorr D, Get
real: a synthetic dataset illustrating clinical and genetic
covariates, NIH Big Data to Knowledge (BD2K) All-Hands Meeting,
Bethesda, MD, 2016.
49. Vasilevsky N, Pederson B, Wirz J, McWeeney S, Haendel M, Hersh
W. Data
science educational resources for anyone, anywhere, NIH
Big Data to Knowledge (BD2K) All-Hands Meeting, Bethesda,
MD, 2016.
50. Laderas T, Haendel M, Vasilevsky N, Pederson B, Wirz J, Hersh
W, Dorr DA, McWeeney S. Getting
your hands dirty with data, NIH Big Data to Knowledge
(BD2K) All-Hands Meeting, Bethesda, MD, 2016.
2. Hersh WR, Another man's poison, M.D. Computing, 1993, 10: 73-74.
3. Hersh WR, Gorman PN, Sacherek LS, The applicability and quality of information for answering clinical questions on the World Wide Web, Journal of the American Medical Association, 1998, 280: 1307-1308.
4. Hersh W, Reply to: Electronic information retrieval by physicians and medical librarians, Journal of the American Medical Association, 1999, 281: 1272-1273.
5. Hersh W, The
telemedicine curriculum, Journal of Telemedicine and Telecare,
2003, 9: 353-354.
6. Mohan V,
Hersh WR, EHRs and health care quality: correlation with
out-of-date, differently purposed data does not equate with
causality, Archives of Internal Medicine, 2011, 171:
952-953.
2. Hersh WR, Review of: Berg M, Rationalizing Medical Work: Decision-Support Techniques and Medical Practices, Cambridge, MA: MIT Press, 1997, Information Processing and Management, 1998, 34: 133-134.
3. Hersh WR, Review of: Witten IH, Moffat A, Bell TC, Managing Gigabytes - Compressing and Indexing Documents and Images, San Francisco: Morgan Kaufmann, 1999, Information Retrieval, 2001, 4: 79-83.
4. Hersh W, The way of the future?, Review of:
Biomed Central,
Nature, 2001, 413: 680.
5. Hersh W, Review of: Goodman K, Ethics,
Medicine, and Information Technology, Cambridge, England:
Cambridge University Press, Journal of Biomedical Informatics,
2017, 66: 159-160.
From 2017:
From 2016:
From 2015:
From 2014:
From 2013:
From 2012:
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