Department of Oral Biology, State University of New York, 3435 Main St, Buffalo NY 14214, USA1
Author for correspondence: Howard K. Kuramitsu. Tel: +1 716 829 2068. Fax: +1 716 829 3942. e-mail: kuramits{at}buffalo.edu
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ABSTRACT |
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Keywords: glucosyltransferase (GTF)
Abbreviations: CDM, chemically defined medium; CLSM, confocal laser scanning microscopy; Ct, threshold cycle; gfp and GFP, green fluorescent protein; gtf and GTF, glucosyltransferase; PgftB, gftB promoter
a Present address: Department of Preventive Dentistry, Kyushu University Faculty of Dental Science, Fukuoka 812-8582, Japan.
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INTRODUCTION |
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The green fluorescent protein (GFP) from the jellyfish Aequorea victoria has been used as a visual marker of gene expression in prokaryotic and eukaryotic organisms. GFP has the advantage of being more sensitive than other reporter genes and requires no extraneous substrates or co-factors for its detection (Chalfie et al., 1994 ). Furthermore, mutants of GFP with increased fluorescence intensities have been constructed; for example, one GFP mutant, gfpmut2, contains a triple substitution S65A, V68L and S72A and exhibits 100-fold more fluorescence in Escherichia coli than the wild-type protein (Cormack et al., 1996
). GFP has also been used as a species-specific marker to label adherent bacteria in biofilms (Skillman et al., 1998
). Furthermore, GFP can be used to analyse the spatial distribution of bacteria in biofilms. Oral biofilms, in the form of dental plaque, are particularly complex because they consist of hundreds of bacterial species (Davey & OToole, 2000
); hence, the utilization of GFP to examine these communities should provide further insights into the spatial distribution of organisms within dental plaque.
Previously, molecular genetic and biochemical studies of the gtf genes have been carried out using planktonic S. mutans. In vitro studies have indicated that gtfB and gtfC are essential for the sucrose-dependent attachment of S. mutans cells to hard surfaces (Aoki et al., 1986 ) but gtfD is dispensable (Hanada & Kuramitsu, 1989
). Nevertheless, all three genes appear to be required for induction of maximal dental caries in a rat model (Yamashita et al., 1993
). In addition, by using a chloramphenicol reporter gene, it has been demonstrated that expression of the gtfBgtfC operon of S. mutans appears to be induced when the organism colonizes solid surfaces in vitro (Hudson & Curtiss, 1990
). However, since gtfC can be transcribed from its own promoter (Smorawinska & Kuramitsu, 1995
), it is not clear if these effects were a result of increased transcription from gtfB, gtfC or both promoters. To test the hypothesis that the expression of S. mutans gtfB is upregulated in biofilms, we have developed a StreptococcusE. coli shuttle vector system to quantitate and visualize the expression of this gene in biofilms using plasmid-encoded GFP. The results described here confirm that gtfB expression is upregulated in biofilm cells and also indicate that the transcription of gtfC can be initiated from the gtfB and the gtfC promoters.
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METHODS |
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Construction of PgtfB::gfp fusion plasmids.
The primers used in this study are listed in Table 2. Plasmid pKEN, containing gfpmut2, was described by Cormack et al. (1996)
. The promoterless gfp XbaIPstI cartridge was excised from pKEN and inserted into the XbaIPstI sites of pUC19 to generate pAYG210. For amplification of the S. mutans GS-5 PgtfB region, oligonucleotides were synthesized based upon the nucleotide sequence of the promoter region of gtfB including a portion of the 5' region of gtfB (GenBank accession no. M17361). To facilitate cloning of the PCR product into pAYG210, which contained the promoterless gfpmut2 sequence, restriction sites were incorporated into the primers. The primer pair comprised gtfBF520(Bam) (complementary to nucleotides 520537) and gtfBR712(Xba) (complementary to nucleotides 695712). A PCR product was amplified from S. mutans GS-5 chromosomal DNA. The product was digested with BamHI and XbaI and inserted in-frame into similarly digested pAYG210. A gtfB::gfp fusion fragment, digested with BamHI and PstI, from pAYBG310 was amplified by PCR using the primer pair gtfBF520(Sph)/gfpR(Sph) (Prasher et al., 1992
). The resulting PCR product was digested with SphI and inserted into SphI-digested pDL276 (Dunny et al., 1991
); the resulting plasmid was designated pAYBG754S. To introduce erythromycin resistance into pAYBG754S, the erythromycin cassette was amplified by PCR from pResEmMCS10 using primers AM1(Sma) and AM3(Sma), respectively (Brehm et al., 1987
; Shiroza & Kuramitsu, 1993
). The resulting PCR product was digested with SmaI and inserted into the SmaI site of pAYBG754S, to generate the erythromycin-resistant plasmid pAYBG854S. To generate a gtfB::gfp fusion by a Campbell-like insertion into the chromosome of S. mutans, a suicide plasmid harbouring the gtfB::gfp fusion was constructed. A gtfB::gfp fusion fragment, digested with BamHI and HindIII, from pAYBG310 was inserted into the BamHI- and HindIII-digested integration plasmid pZ63 (Sato et al., 1991
); the resulting plasmid was designated pAYBG554.
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Flow cytometry analysis.
gtfB expression by cells of S. mutans 854S and GS-5 in their planktonic and biofilm forms was monitored by flow cytometry using an EPICS XL apparatus with XL SYSTEM II software (Beckman Coulter). Green fluorescence (excitation 488 nm;
emission 515545 nm) was analysed. Dead cells were excluded from the analysis using forward- and side-scatter light gating. Planktonic and sessile cells for fluorescence-activated cell sorter (FACS) analysis were obtained following overnight anaerobic culturing of the strains in CDM supplemented with 0·5% sucrose in 6-well polystyrene plates (Corning). Under these conditions, the bottom surfaces of the wells were uniformly covered by the parental GS-5 cells. Briefly, after separating the planktonic and sessile cells, the sessile cells were washed several times with CDM. The sessile cells were then resuspended in fresh CDM and sonicated to disrupt the streptococcal chains, to avoid the effects of size differences. The planktonic cells were also sonicated, in a similar manner to the sessile cells. Both planktonic and sessile cells were added to 5 ml of fresh CDM supplemented with 0·5% sucrose to an OD570 value of 0·3. Sodium phosphate buffer (1·0 M) was then added to the suspensions to a final concentration of 50 mM (pH 7·0) about 10 min before the FACS analysis was done.
Confocal laser scanning microscopy (CLSM).
Microscopic observations and image acquisition were performed with a CLSM system using LSM 5 PASCAL with LSM 5 PASCAL software (Carl Zeiss); excitation 488 nm and
emission 505530 nm were analysed. Biofilms for CLSM analysis were prepared the same way as for the FACS analysis. Briefly, overnight cultures of S. mutans 854S and GS-5 grown in CDM supplemented with 0·5% sucrose in 6-well polystyrene plates (Corning) were washed several times with CDM and then fresh CDM was added to the wells. Water-immersion lenses (Plan-NEOFLUAR 25/0·81 mm; Carl Zeiss) were employed for this study.
RT-PCR analysis.
Total RNA was isolated from S. mutans by using TRIZOL Reagent (Gibco-BRL), according to the manufacturers instructions, and treated with RNase-free DNase (DNase I; Gibco-BRL). Reverse transcriptase reactions were performed by using SUPERSCRIPT II RNase H- Reverse Transcriptase (Gibco-BRL), according the manufacturers instructions. For the RT-PCR experiment, primers were designed from the sequences of the gtfB and gtfC genes; the primer pairs used are listed in Table 2. PCR amplifications were carried out with Taq polymerase (Promega) and the following cycling protocol: one cycle at 94 °C for 5 min followed by 40 cycles at 94 °C for 30 s, 47 °C for 30 s and 72 °C for 1 min. To check for DNA contamination, reverse transcriptase was not present in the negative control reaction.
Oligonucleotide primers and probes for real-time RT-PCR.
Oligonucleotide primers and probes for gtfB and 16S rRNA (a housekeeping gene used as an internal control) were designed by using Primer Express 1.5 software (PE Biosystems). Fluorogenic probes were used to continuously monitor PCR product formation during PCR. The oligonucleotide probe for 16S rRNA was labelled with a reporter dye (6-carboxyfluorescein) covalently attached at its 5' end and a quencher dye (6-carboxytetramethylrhodamine) covalently attached at its 3' end. A TaqMan minor-groove-binder probe consisting of a 6-carboxyfluorescein-labelled oligonucleotide at the 5' end and a non-fluorescent quencherminor-groove-binder complex (Tm enhancer) at the 3' end was used as a probe for gtfB (Kutyavin et al., 2000 ). Primers and probes were synthesized and purified by Applied Biosystems. The primers and probes used for real-time PCR are listed in Table 2
; the amplicons generated with these primers were 299 and 70 bp in length for gtfB and 16S rRNA, respectively.
Real-time RT-PCR.
Total RNA was isolated from planktonic and biofilm cells using TRIZOL Reagent (Gibco-BRL) according to the manufacturers instructions. Single-stranded cDNA was then synthesized in a reaction mixture containing 1·25 U MultiScribe Reverse Transcriptase µl-1, 0·4 U RNase Inhibitor µl-1, 500 µM of each dNTP, 200 nM antisense primer, 1xReverse Transcription buffer, 5·5 mM MgCl2 (TaqMan Reverse Transcription Reagents; Applied Biosystems) and 1 µg total RNA at 48 °C for 30 min. To check for DNA contamination, purified total RNA without reverse transcriptase served as a negative control. The resulting cDNA and negative control were amplified by using the TaqMan Universal PCR Master Mix (Applied Biosystems), which contained dNTPs with dUTP, AmpliTaq Gold DNA polymerase, Amperase UNG, optimized buffer and a passive reference dye. For each PCR, a mixture containing 5 ng template cDNA, 1xMaster Mix, 200 nM of each sense and antisense primer and 250 nM TaqMan probe was placed in a 96-well MicroAmp Optical Reaction Plate with Optical Caps (Applied Biosystems). Amplification and detection of the specific products were performed on an ABI PRISM 7700 Sequence Detection System (PE Biosystems) with the following cycle protocol: one cycle at 50 °C for 2 min and one cycle at 95 °C for 10 min followed by 60 cycles at 95 °C for 15 s and 60 °C for 1 min. The critical threshold cycle (Ct) was defined as the cycle at which the fluorescence became detectable above the background fluorescence, and was inversely proportional to the logarithm of the initial number of template molecules. A standard curve was plotted for each primer-probe set with Ct values obtained from amplification of known quantities of cDNA. To check the linearity of the detection system, a cDNA dilution series (1/10, 1/100, 1/1000 and 1/10000) was amplified with primer pairs and probes so that a correlation coefficient could be calculated from the standard curve displaying Ct values. The standard curves were used to transform Ct values to the relative number of cDNA molecules. The quantity of cDNA for gtfB was normalized to that of cDNA synthesized from 16S rRNA. The relative amounts of RNA per cell were approximately the same for planktonic and biofilm cells (data not shown).
Statistical analysis.
The variables for fluorescent intensities of GFP between biofilm and planktonic cells were assessed by using Students t-test. A P value of less than 0·05 was considered statistically significant.
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RESULTS |
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DISCUSSION |
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PgtfB::gfp was isolated on high-copy-number plasmids (pUCori or ColE1), but not on a medium-copy-number plasmid (p15Aori) (Y. Nakano, personal communication). Interestingly, the copy number of the plasmid harbouring the PgtfB fragment was significantly decreased when compared with that of the original plasmid (data not shown). Therefore, pDL276, a high-copy-number StreptococcusE. coli shuttle vector, was selected for subcloning the PgtfB::gfp fusion. Following transformation of pAYBG854S (pDL276 harbouring PgtfB::gfp) into E. coli DH5, GFP expression driven by the S. mutans PgtfB was active in E. coli on agar plates, as revealed by the green fluorescent colonies of the transformants. However, the fluorescence from the S. mutans transformants that expressed GFP was not detected on agar plates. In addition to this, the transformation efficiency of S. mutans GS-5 with pAYBG854S extracted from E. coli was quite low. However, the transformation rate of S. mutans GS-5 with pAYBG854S isolated from S. mutans 854S was relatively high. This suggested that restrictionmodification systems in E. coli may be responsible for the differences seen in transformation efficiency between pAYBG845S isolated from E. coli and the same plasmid isolated from S. mutans 854S.
For visualization of S. mutans 854S cells, CLSM analysis was performed. S. mutans harbouring a single chromosomal copy of gfp did not display visible fluorescence, but transformants harbouring multiple copies of gfp were fluorescent. A study by Acebo et al. (2000) reported that fluorescence could be detected from Streptococcus pneumoniae cells that harboured a single chromosomal copy of gfp by fluorescence microscopy. However, the gfp copy number may be one of several important factors affecting the expression of a target promoter. For example, the differences in fluorescence intensity may be influenced by variations in oxygen intake by the bacteria or by other factors (Hansen et al., 2001
).
CLSM was also carried out on S. mutans biofilms attached to the wells of polystyrene plates. The advantage of using CLSM in biofilm studies is due to the enhanced ability this technique affords for observing and analysing fresh, undisturbed materials in real time (Lawrence & Neu, 1999 ). From the CLSM images of the S. mutans biofilms, it was observed that gtfB expression was enhanced on the surfaces of the biofilms; vertical gradients of fluorescence were also observed in the biofilms. In previously utilized flowcell systems, rapid oxygen distribution in Streptococcus gordonii biofilms has been confirmed (Hansen et al., 2001
). Our results suggest that the oxygen supply may be a limiting factor in the deeper layers of the artificial biofilm. Moreover, the fluorescence pattern of the S. mutans biofilm (as seen in Fig. 3a
) could be due either to microcolonies where gtfB expression is enhanced or to gaps between microcolonies where aeration is better. In the process of bacterial biofilm formation, bacterial species migrate over the colonized surface to form microcolonies and, subsequently, produce an exopolysaccharide matrix to form and support the biofilm (Watnick & Kolter, 2000
). Thus, our findings, which suggest enhanced gtfB expression in microcolonies, are consistent with this general model for biofilm formation.
Based on the initial experiments detailed here, we have examined gtfB expression in planktonic and biofilm cells using two distinct approaches. In earlier work, several groups examined gtfBC expression using various reporter systems with a single chromosomal copy of the reporter gene (Burne et al., 1997 ; Hudson & Curtiss, 1990
). It is important to consider several aspects of the promoterreporter system when analysing the expression of the S. mutans gtfB and gtfC genes. In the present study, we employed GFP expression and flow cytometry to detect the expression of gtfB in S. mutans biofilms. At first, to eliminate the effects of differences in gfp copy number, we compared the ratios of plasmid to chromosomal DNA in biofilm and planktonic cells and found these to be quite similar (data not shown). The fluorescent intensity of the biofilm cells was enhanced compared with that of the planktonic cells. A study by Hudson & Curtiss (1990)
reported that the chloramphenicol acetyltransferase activity of S. mutans cells directed by the gtfBC operon promoter was approximately two-fold higher in cells bound to saliva-coated beads than in unbound cells. To date, almost all of the transcription analyses done involving the gtfB and gtfC genes of S. mutans and reporter fusions have utilized single chromosomal copies of the reporter genes (Burne et al., 1997; Hudson & Curtiss, 1990
). However, a study by Goodman & Gao (2000)
indicated that transcription of the endogenous gtfB and gtfC genes was similar for both chromosomal and plasmid copies of these genes fused to reporters.
A general hypothesis concerning gtfBC transcriptional regulation is that a promoter upstream of gtfB initiates transcription of a polycistronic message which includes the gtfB and the gtfC genes (Ueda et al., 1988 ). However, several groups have reported that there is another promoter in the gtfBgtfC intergenic region that might allow the independent expression of gtfC (Goodman & Gao, 2000
; Smorawinska & Kuramitsu, 1995
). Due to difficulties in using Northern-blot analysis, it is reasonable to employ RT-PCR to characterize the transcripts of the gtfB and gtfC genes. The RT-PCR analysis of the gtfBC genes performed here revealed that gtfC can be transcribed together with gtfB in a single polycistronic mRNA. This finding represents the first experimental verification of this hypothesis. Hence, based upon this result and previous results (Smorawinska & Kuramitsu, 1995
), it is suggested that gtfC is most likely transcribed from the gtfB and the gtfC promoters. Therefore, it is likely that earlier studies done using gtfBC reporter systems detected not only gtfB expression but also gtfC expression, since the reporter gene was fused downstream of gtfC (Burne et al., 1997
; Goodman & Gao, 2000
; Hudson & Curtiss, 1990
). Therefore, the present results represent the first study of gtfB promoter regulation in S. mutans biofilms.
To eliminate the effects of gtfC expression from our results, we also performed real-time RT-PCR (TaqMan) analysis for only gtfB expression in planktonic and biofilm cells. The TaqMan RT-PCR assay is very sensitive and specific for obtaining quantitative information regarding transcription, and the use of this assay represents a significantly different approach for studying gtfB expression relative to previous studies. Our analysis demonstrated that the rate of transcription of gtfB in biofilm cells was approximately four times higher than that in planktonic cells. These results suggest gtfB to be an important factor in S. mutans biofilm formation.
The stable expression of GFP by S. mutans transformants provides a useful method for studying the interaction(s) of this pathogen in biofilms. The use of CLSM in combination with the S. mutans GFP-expressing strain will make it possible to visualize bacterial behaviour in homogeneous and mixed-species biofilms. This approach should accelerate the characterization of the S. mutans gtfB gene as a virulence factor and contribute to our understanding of how S. mutans behaves in biofilms such as dental plaque.
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ACKNOWLEDGEMENTS |
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REFERENCES |
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Received 30 April 2002;
revised 12 June 2002;
accepted 26 July 2002.