1 Laboratory of Muscle Biology, National Institute of Arthritis and
Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD
20892, USA
2 Beatson Institute for Cancer Research, Garscube Estate, Switchback Road,
Glasgow G61 1BD, UK
* Author for correspondence (e-mail: horowits{at}helix.nih.gov)
Accepted 11 February 2003
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Summary |
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Key words: N-RAP, -actinin, Filamin, Krp1, Myofibril
![]() |
Introduction |
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N-RAP has also been implicated in the earliest steps of myofibril assembly
(Carroll et al., 2001;
Carroll and Horowits, 2000
).
Although subsequent steps are controversial, many investigators agree that the
earliest myofibril precursors originate near the membrane, where
-actinin and actin assemble into I-Z-I complexes
(Dabiri et al., 1997
;
Ehler et al., 1999
;
Imanaka-Yoshida et al., 1998
;
Rhee et al., 1994
;
Rudy et al., 2001
). Time-lapse
studies of living cardiomyocytes expressing
-actinin fused to GFP
suggest that the closely spaced
-actinin beads in these structures
aggregate laterally to form nascent myofibrils
(Dabiri et al., 1997
).
Additional evidence suggests that muscle myosin may separately assemble into
bipolar thick filaments that are oriented and incorporated into the nascent
myofibrils by their interactions with titin filaments
(Holtzer et al., 1997
;
Rudy et al., 2001
;
Schultheiss et al., 1990
).
Interestingly, nebulette, another protein with nebulin-related repeats, also
appears to associate with myofibril precursors early during assembly; however,
nebulette is expressed only in cardiac muscle and remains associated with
mature Z-lines (Moncman and Wang,
1995
; Moncman and Wang,
1999
). In contrast, although N-RAP is found in all the myofibril
precursors in cultured cardiomyocytes, it is not found in mature sarcomeres
(Carroll and Horowits, 2000
;
Luo et al., 1997
) and is
expressed in both skeletal and cardiac muscle
(Luo et al., 1997
;
Zhang et al., 2001
).
N-RAP contains distinct regions that target to the cell periphery, the
actin filaments, and the Z-lines when expressed as GFP-fusion proteins
(Carroll et al., 2001). These
regions are, respectively, the N-terminal LIM domain that binds talin in vitro
(Luo et al., 1999
), the
C-terminal nebulin-related super repeats that bind actin and vinculin in vitro
(Luo et al., 1999
), and the
region in between these two domains that binds muscle LIM protein (MLP)
(Ehler et al., 2001
) as well as
actin, although actin binding is ten fold weaker than in the super repeat
region (Luo et al., 1999
).
Overexpression of any of these regions of N-RAP can inhibit myofibril assembly
in the cultured cardiomyocytes (Carroll et
al., 2001
). This functional data led us to propose that N-RAP is
an organizing center during the first steps of myofibril assembly, controlling
the integration of
-actinin and actin to form the first premyofibril
complex at the membrane (Carroll et al.,
2001
).
To discover more about N-RAP's functions and its involvement in myofibril
assembly, we used yeast two-hybrid technology
(Bartel and Fields, 1995) to
screen a mouse skeletal muscle cDNA library for proteins capable of binding
N-RAP in a eukaryotic cell. We found that N-RAP binds
-actinin, filamin
and Krp1 in vivo and in vitro, and that filamin and Krp1 appear to associate
with myofibrils during different steps of the assembly process, with
implications for the molecular mechanism of myofibril assembly.
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Materials and Methods |
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Screening for N-RAP binding partners
A cDNA library derived from mouse skeletal muscle and estimated to contain
7.2x106 independent clones inserted downstream of the B42
transcription activation domain in the prey vector pJG4-5 was obtained from
OriGene Technologies (Rockville, MD). This library was screened for N-RAP
binding partners using the Invitrogen Hybrid-Hunter yeast two-hybrid system,
according to the manufacturer's protocols (Invitrogen). In brief, L40 yeast
cells expressing the pHybLex/Zeo-N-RAP bait plasmid were transfected with the
mouse skeletal muscle cDNA library. Assays for LacZ and His3
reporter gene activities were performed according to the manufacturer's
protocols (Invitrogen). Double transformants and potential binding partners
were selected by 3-4 days of growth at 30°C on selective YC plates lacking
uracil, lysine, tryptophan, and histidine, and including 300 µg/ml Zeocin;
absence of uracil and lysine selects for the L40 yeast strain, whereas Zeocin
and absence of tryptophan select for transformants carrying the pHybLex/Zeo
bait plasmid and the pJG4-5 prey plasmid, respectively. Omitting histidine
selects for putative binding partners by requiring activation of the
His3 reporter gene for growth. The His+ double
transformants were replica-plated for ß-galactosidase activity
assays.
Activation of the lacZ reporter gene was determined using a ß-galactosidase filter lift assay as specified in the Hybrid-Hunter instruction manual (Invitrogen). Yeast colonies growing on selective media were transferred to nitrocellulose and lysed by freezing in liquid nitrogen for 1 minute. After thawing at room temperature for 1 minute, the nitrocellulose filters were placed, yeast colonies up, onto sterile Whatman #1 filter paper soaked in 1.5 ml of Z buffer (60 mM Na2HPO4, 40 mM NaH2PO4, 10 mM KCl, 1 mM MgSO4, pH 7.0) containing 1 mg/ml X-gal. The filters were incubated at 30°C for 30-60 minutes; a blue color in this assay indicates strong activation of the LacZ reporter gene in the corresponding colony. Colonies that were positive for both histidine prototrophy and ß-galactosidase activity were chosen as putative positive clones for further study.
The plasmids from initial positive clones were isolated from yeast cells using the YEASTMAKER Yeast Plasmid Isolation Kit (Clontech, Palo Alto, CA) and the cDNA inserts from all plasmids encoding candidate interacting proteins were amplified by PCR using the Advantage 2 PCR Kit (Clontech). The pJG4-5 forward (5'-GATGCCTCCTACCCTTATGATGTGCC-3') and reverse (5'-GGAGACTTGACCAAACCTCTGGCG-3') primers were used for amplifying the cDNA inserts. The following amplification cycles were utilized: 1 cycle at 95°C for 1 minute; 35 cycles at 95°C for 30 seconds then 68°C for 3 minutes; and 1 cycle at 68°C for 3 minutes. 10 µl samples of the PCR product were electrophoresed on a 0.8% agarose gel to confirm the insert for each individual clone and to verify the homogeneity of the plasmid preparation.
Aliquots of 10 µl of each amplified insert were double-digested with the frequent-cutter restriction enzymes AluI and HaeIII (Roche Diagnostics, Indianapolis, IN) in a 25 µl reaction. The digested samples were electrophoresed on Novex 4-20% polyacrylamide TBE gels (Invitrogen). Clones with identical insert sizes and restriction digest patterns were identified as probable identical clones of a single transcript, and representative clones were selected from each group for further characterization.
Plasmids from one or more representative clones from each group were transfected into One Shot TOP10 Chemically Competent E. coli cells (Invitrogen), amplified, and isolated using the S.N.A.P. Miniprep Kit (Invitrogen). The plasmids were reintroduced into yeast cells carrying either the pHybLex/Zeo-N-RAP bait plasmid or the negative control, the pHybLex/Zeo-Lamin bait plasmid (Invitrogen, Inc., Carlsbad, CA). The doubly transfected yeast cells were assayed for His3 and LacZ reporter gene activities as detailed above. Clones resulting in specific activation of both reporter genes in the presence of pHybLex/Zeo-N-RAP but not in the presence of pHybLex/Zeo-Lamin were end-sequenced at Lofstrand Labs Limited (Gaithersburg, MD).
Antibodies
Rabbit polyclonal antibodies against N-RAP
(Luo et al., 1997) and Krp1
(Spence et al., 2000
) have
been previously described. Polyclonal antibody against LexA was obtained from
Invitrogen (Carlsbad, CA). Monoclonal antibodies against sarcomeric
-actinin, monoclonal and polyclonal antibodies against chicken gizzard
filamin, and rhodamine-linked rabbit anti-mouse antibody were obtained from
Sigma (St. Louis, MO). Horseradish peroxidase-linked donkey anti-rabbit and
anti-mouse whole antibodies and FITC-linked donkey anti-rabbit antibody were
purchased from Amersham Biosciences (Piscataway, NJ). FITC-linked donkey
anti-goat (F(ab)2 fragment) was purchased from Jackson
Immunoresearch Laboratories (West Grove, PA).
Gel electrophoresis and immunoblotting
Single yeast colonies were grown in 5 ml of YPAD Z300 medium (YPD medium
[Clontech, Palo Alto, CA] with the addition of 300 µg/ml Zeocin and 0.1
mg/ml adenine) overnight at 30°C. Cells were pelleted, washed with water,
frozen on dry ice for one hour, and then mixed with 100 µl of 425-600 µm
acid washed glass beads (Sigma) and 130 µl of complete cracking buffer (8 M
urea, 5% SDS, 40 mM tris-HCL pH 6.8, 0.1 mM EDTA, 1% ß-mercaptoethanol,
4.4 mM PMSF, 6% protease inhibitor cocktail [Sigma]); the cells were incubated
at 75°C for 10 minutes and then broken by high speed vortexing for 1
minute. The cell lysate was centrifugated at 16,000 g for 5
minutes in a benchtop centrifuge. The supernatant was diluted 1:1 with 2% SDS,
20% glycerol, 140 mM ß-mercaptoethanol, and 0.05% bromophenol blue.
Samples were boiled for 4 minutes and 10 µg per lane was electrophoresed on
a Novex NuPage 3-8% polyacrylamide tris-acetate gel (Invitrogen). After gel
electrophoresis, the proteins were transblotted onto polyvinylidenedifluoride
(PVDF) paper. The PVDF blots were incubated in a blocking solution of 10%
non-fat dry milk and 0.2% tween-20 in phosphate buffered saline (PBS, pH 7.4)
for 1 hour at room temperature. The recombinant proteins were detected by
primary polyclonal antibodies against N-RAP and LexA followed by horseradish
peroxidase conjugated anti-rabbit Ig; the N-RAP and LexA primary antibodies
were diluted in blocking buffer 1:5000 and 1:1000, respectively, and secondary
antibody was diluted in blocking buffer 1:5000. The incubations with primary
antibodies were carried out at 4°C overnight and with the secondary
antibody for one hour at room temperature. Bound antibodies were detected by
enhanced chemiluminescence using the ECL western blotting system (Amersham
Biosciences).
Bacterial expression of recombinant proteins
Three regions of mouse N-RAP (N-RAP-IB, N-RAP-LIM, N-RAP-SR) as well as
chloramphenicol acetyltransferase (HIS-CAT) were expressed as N-terminal
histidine-tagged recombinant proteins in E. coli and purified as
previously described (Luo et al.,
1999; Zhang et al.,
2001
).
Rat Krp1 was expressed and purified as a fusion protein containing an
N-terminal GST-tag using the GST Gene Fusion System (Amersham Biosciences)
according to the manufacturer's protocol. The full-length open reading frame
of rat Krp1 was PCR amplified as previously described
(Spence et al., 2000) and
cloned into the EcoRI site of the pGex-2TK plasmid. In brief, the
pGex-2TK-Krp1 plasmid was transformed into BL21 host E. coli cells
(Invitrogen). Bacterial cells harboring the expression plasmids were cultured
in 2 L of 2x YT medium with 100 µg/ml ampicillin at 37°C. Three
hours later the expression of Krp1-GST was induced by the addition of
isopropyl thio-ßD-galactoside (IPTG) to a final concentration of
0.2 mM at 24°C followed by an additional 3 hours of incubation. Cells were
pelleted after induction by centrifugation at 4000 g for 15
minutes at 4°C and resuspended in 1/10 culture volume of cellytic B
(Sigma) with 10 mg/ml lysozyme, 1 mM PMSF and 0.02 µM leupeptin (Sigma).
The cells were then sonicated for 20 seconds in a Branson Sonifier 250
sonicator (Branson Ultrasonics, Danbury, CT) followed by end to end shaking at
4°C for 10 minutes to fully extract the cells. The homogenates were
centrifuged at 30,000 g for 15 minutes at 4°C. GST-tagged
Krp1 fusion proteins were purified directly from supernatants using the
affinity matrix Glutathione Sepharose 4B (Amersham Biosciences) according to
the manufacturer's protocol.
After purification of the recombinant protein, the GST tag was removed by overnight digestion at 22°C with thrombin (Amersham Biosciences) at 10 cleavage units/mg fusion protein in elution buffer (10 mM glutathione, 50 mM Tris-HCl, pH 8.0); cleavage was followed by extensive dialysis against 1 x PBS and column purification on Glutathione Sepharose 4B. The purified Krp1 proteins were found in the flow-through. Purified GST-tagged fusion proteins as well as purified Krp1 proteins after thrombin cleavage were analyzed by gel electrophoresis and immunoblotting as described above using anti-Krp1 polyclonal antibody.
Filamin binding to blotted proteins
Gel overlay binding assays were performed as previously described
(Zhang et al., 2001).
His-tagged N-RAP recombinant proteins were electrophoresed under denaturing
conditions and blotted to PVDF membranes. After washing and blocking, the
membranes were incubated overnight at 4°C with 10 µg/ml (0.04 µM
total monomer) chicken gizzard filamin (Research Diagnostics, Flanders, NJ) in
binding buffer (100 mM KCl, 50 mM Tris-HCl [pH 7.4], 1 mM EGTA, 2 mM
MgCl2, 2 mM ATP, 0.3 mM dithiothreitol [DTT], and 0.2% Tween-20).
Bound filamin was detected by primary monoclonal antibody against chicken
gizzard filamin (Sigma) followed by horseradish peroxidase conjugated
anti-mouse antibody (Amersham Biosciences); the primary and secondary
antibodies were diluted 1:1000 and 1:2000, respectively, in binding buffer.
The ECL western blot system was used for detection of bound antibody (Amersham
Biosciences).
Krp1, filamin and -actinin binding to N-RAP proteins
immobilized on Ni-NTA agarose beads
Ni-NTA magnetic agarose beads (Qiagen, Valencia, CA) were used to
immobilize histidine-tagged proteins in binding assays performed according to
the manufacturer's protocol. In brief, 30 µg of histidine-tagged
recombinant proteins (His-N-RAP-SR, His-N-RAP-LIM, His-N-RAP-IB, His-CAT) were
incubated with 100 µl of Ni-NTA magnetic agarose beads for 1.5 hours at
room temperature under denaturing conditions (8 M urea, 0.1 M
NaH2PO4, 0.01 M Tris-Cl, 0.005% Tween 20, pH 8.0). The
recombinant proteins immobilized on the Ni-NTA matrix were renatured by
sequential incubations in 4 M, 2 M, 1 M, and 0 M urea in phosphate buffer (0.1
M NaH2PO4, 0.01 M Tris-Cl, 0.005% Tween 20, pH 8.0) over
a period of 2 hours. They were then incubated with potentially interacting
biomolecules (Krp1, filamin or -actinin) at final monomer
concentrations of 2.5 µg/ml (0.037 µM), 33 µg/ml (0.13 µM) and 33
µg/ml (0.33 µM), respectively. Purified chicken gizzard filamin was
purchased from Research Diagnostics (Flanders, NJ) and purified rabbit
skeletal muscle
-actinin was purchased from Cytoskeleton (Denver, CO).
The binding reactions were incubated with shaking overnight at 4°C in
interaction buffer (100 mM KCl, 50 mM Tris-HCl, 1 mM MgCl2, 2 mM
ATP, 2.8 mM ß-mercaptoethanol, 0.005% Tween-20, 10 mM imidazole, pH 7.5).
The Ni-NTA agarose beads were washed 4x15 minutes in interaction buffer
to remove unbound proteins and then analyzed by gel electrophoresis and
immunoblot detection of Krp1, filamin, or
-actinin. Polyclonal antibody
against Krp1 was used followed by horseradish peroxidase conjugated
anti-rabbit antibody (Amersham Biosciences); the primary and secondary
antibodies were diluted 1:2500 and 1:5000, respectively. Monoclonal antibodies
against
-actinin and filamin were used followed by horseradish
peroxidase conjugated anti-mouse antibody (Amersham Biosciences); the primary
and secondary antibodies were diluted 1:1000 and 1:2000, respectively. The ECL
western blot system was used for detecting bound antibody (Amersham
Biosciences).
Culture of embryonic chick cardiomyocytes
Primary cardiomyocyte cultures were prepared from 7-10-day-old chick
embryos, fixed in 4% formaldehyde, and permeabilized with Nonidet-P-40 as
previously described (Carroll and Horowits,
2000). Cells were blocked with 5% normal serum (Sigma) in PBS for
30 minutes. For N-RAP/
-actinin and Krp1/
-actinin double
staining, normal goat serum was used; for filamin/
-actinin double
staining, normal donkey serum was used. After blocking, cells were exposed to
primary polyclonal antibodies against N-RAP, Krp1, or filamin at a dilution of
1:1000. These antibody exposures were followed by exposure to a monoclonal
antibody against sarcomeric
-actinin at a dilution of 1:2000. The N-RAP
and Krp1 antibodies were detected using a donkey anti-rabbit FITC-linked
secondary antibody at a dilution of 1:100; the filamin antibody was detected
using a donkey anti-goat FITC-linked secondary antibody (F(ab)2
fragment; Jackson Immunoresearch Laboratories) at a dilution of 1:100; and the
-actinin antibody was detected using a rhodamine-linked rabbit
anti-mouse secondary antibody at a dilution of 1:500. All antibody incubations
were for 1 hour at 37°C in PBS. Vectashield (Vector Laboratories,
Burlingame, CA) was added to each well to prevent photobleaching.
Cardiomyocytes were observed with a Zeiss Axiovert 135 microscope equipped for
incident-light fluorescence and phase contrast microscopy using a 63x
oil immersion objective with a numerical aperture of 1.25. The appropriate
filters for either flourescein or rhodamine fluorescence were used. Images
were collected using a Photometrics CoolSnap fx CCD camera (Roper Scientific,
Tucson, AZ) interfaced with a Power Macintosh computer.
In order to objectively evaluate co-localization, raw images were composited by storing the rhodamine and fluorescein signals as red and green channels of a single image and then processed using a Macintosh computer. Fluorescent images were inverted and the diffuse background staining of each channel was subtracted with a 2D-rolling ball algorithm with radius set to 50 pixels (5.5 µm) using the public domain NIH Image program [developed at the US National Institutes of Health and available on the NIH website (http://rsb.info.nih.gov/nih-image/)]. After background subtraction, images were inverted and data in each channel were rescaled to occupy the entire dynamic range using Adobe Photoshop software (Adobe Systems, San Jose, CA). Images are presented as separated or overlayed red and green channels. In addition, double staining was further demonstrated by multiplying the background subtracted and rescaled red and green channels to produce a new greyscale image; if a pixel is black (0) in either channel, the result is black in the multiplied image. Therefore, only areas that are fluorescent in both channels are visualized in the multiplied image.
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Results |
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|
The bait strain expressing LexA-N-RAP was transfected with a mouse skeletal
muscle cDNA library in which the inserts were expressed as fusion proteins
with the B42 transcription activation domain. Screening
7.2x106 cDNA clones led to the identification of 450 double
transformants exhibiting ß-galactosidase activity and histidine
prototrophy. Of these, 90 were randomly selected for further study. PCR and
restriction digest analysis of these 90 clones indicated that many were
identical, allowing us to create 35 unique groups containing 68 of the clones
for further study. The remaining 32 clones were found to contain multiple
inserts or no inserts. One or more representatives from each of the 35 groups
were tested for specific activation of the reporter genes. Each of the
plasmids isolated from these colonies activated both reporter genes when
re-introduced into the N-RAP bait strain. However, representatives from 23 of
these groups also activated one or both of the reporter genes when introduced
into the lamin bait strain, suggesting nonspecific activation. The remaining
12 groups contained 33 clones exhibiting specific positive binding activity
for N-RAP in the yeast two-hybrid system. End-sequencing and comparison to the
GenBank database identified 15 of these clones as encoding filamin-2 (also
called filamin-C or gamma-filamin)
(Thompson et al., 2000;
van der Ven et al., 2000b
;
Xie et al., 1998
), 11 clones
as encoding Krp1 (also called sarcosin)
(Spence et al., 2000
;
Taylor et al., 1998
), and four
of these clones as encoding
-actinin-3
(Beggs et al., 1992
;
Mills et al., 2001
).
End-sequenceing indicated that the 11 Krp1 clones and the four
-actinin-3 clones isolated all contained the full-length open reading
frames of their respective proteins. In contrast, the 15 filamin-2 clones
isolated were C-terminal clones of varying lengths
(Fig. 2). The shortest filamin
clone encodes Ig repeats 20-24 and includes a short hinge region between
repeats 23 and 24, demonstrating that N-RAP binds this C-terminal region of
filamin.
|
Interaction of N-RAP domains with new binding partners in vitro
We used recombinant histidine-tagged N-RAP fragments immobilized on PVDF
filters or on magnetic Ni-NTA beads to assay binding activity to the putative
binding partners identified in the yeast two-hybrid screen. These assays
verified the results of the in vivo screen and identified the specific N-RAP
domains mediating the protein-protein interactions.
Fig. 3A illustrates the
regions of N-RAP expressed as histidine-tagged fusion proteins for use in
binding assays. When muscle -actinin was incubated with the recombinant
N-RAP fragments captured on magnetic Ni-NTA beads, we observed significant
binding to the N-RAP LIM domain and to N-RAP-IB; in contrast, no binding was
observed to either the N-RAP super repeats or the histidine-tagged CAT
proteins (Fig. 3B,C). The
results confirm the specificity of
-actinin binding previously observed
in a gel overlay assay (Zhang et al.,
2001
).
|
Fig. 4 illustrates binding of purified filamin to recombinant N-RAP fragments in both the gel overlay assay (Fig. 4A,B) and the Ni-NTA beads assay (Fig. 4C,D). Both methods demonstrate that filamin binds to the N-RAP super repeats, but does not interact with the N-RAP LIM domain or with N-RAP-IB. The small signals detected for filamin binding to these latter two constructs are similar to those for binding to the His-CAT control proteins, suggesting some nonspecific interaction with the histidine tags present in the recombinant proteins.
|
Fig. 5 illustrates the purity of the GST-Krp1 fusion protein before and after removal of the GST tag with thrombin; total protein stained with coomassie blue (Fig. 5A) and the immunoblot detected with anti-Krp1 antibody (Fig. 5B) are shown. The results show that purified Krp1 migrates as a single band at the molecular weight predicted from the cDNA sequence. After removal of the GST tag, purified Krp1 was assayed for binding to recombinant N-RAP fragments immobilized on Ni-NTA beads (Fig. 5C,D); the results clearly show that Krp1 binds to N-RAP super repeats and N-RAP-IB, but does not bind the N-RAP LIM domain. We also attempted to assay Krp1 binding to N-RAP fragments using the gel overlay assay. However, control experiments demonstrated that the anti-Krp1 antibody detected the histidine-tagged N-RAP LIM domain, as well as the His-CAT control protein. Because the N-RAP fragments and any binding partners are co-localized on the membrane in the blot overlay assay, the apparent cross-reaction of the antibody with the recombinant tag precluded its use for assaying Krp1 binding to N-RAP fragments.
|
Localization of N-RAP binding partners during myofibril assembly
We studied the localization of N-RAP and its newly identified binding
partners during myofibril assembly in primary cultures of embryonic chick
cardiomyocytes. Because -actinin is an informative marker for all known
myofibril precursors as well as for the mature myofibrils, we double stained
cardiomyocytes for
-actinin and either N-RAP, filamin, or Krp1.
Fig. 6A,B show that N-RAP is
concentrated along the periphery of the cell where closely spaced
-actinin dots are found. The punctate
-actinin staining in these
regions (Fig. 6A) is
characteristic of early myofibril precursors
(Dabiri et al., 1997
;
Ehler et al., 1999
;
Imanaka-Yoshida et al., 1998
;
Rhee et al., 1994
;
Rudy et al., 2001
). In
contrast, the N-RAP staining in these regions is more patchy and diffuse
(Fig. 6B); nevertheless, N-RAP
staining overlays the punctate
-actinin staining at the periphery of
the cardiomyocyte (Fig. 6C,D).
The results suggest that N-RAP is a component of the premyofibril that extends
beyond the Z-bodies identified by punctate
-actinin staining. N-RAP
also appears to be concentrated in regions where narrow sarcomeres appear to
be fusing laterally to form broader myofibrils
(Fig. 6E-H).
|
Like N-RAP, filamin is found in large regions of premyofibrils along the
cell preiphery, exhibiting a diffuse, mesh-like appearance in contrast with
the punctate -actinin pattern (Fig.
7A-D, asterisks). More centrally located mature myofibrils exhibit
broad periodic striations of filamin staining that co-localize with the
-actinin staining in Z-lines (Fig.
7A-D, arrowheads). Some structures are characterized by near
continuous
-actinin and filamin staining
(Fig. 7 E-H, arrows). As
sarcomeres mature and
-actinin spacing increases, filamin staining is
still observed between the newly formed Z-lines
(Fig. 7E-H, arrowheads). In
fully mature regions, filamin staining is restricted to the Z-lines
(Fig. 7E-H, asterisks).
|
Immunoblot analysis demonstrated significant Krp1 protein expression in
adult mouse skeletal muscle and primary cultures of embryonic chick
cardiomyocytes, but no significant expression in adult mouse heart
(Fig. 8). Unlike
-actinin, N-RAP and filamin, Krp1 does not appear to be localized in
the early peripheral myofibril precursors in cultured chick cardiomyocytes.
Fig. 9A illustrates a
cardiomyocyte with peripheral punctate
-actinin staining as well as
more centrally located mature striations of
-actinin. In this cell,
Krp1 staining is diffusely distributed in the central region. In more mature
cells, Krp1 staining is often seen outlining the periphery of longitudinally
oriented myofibrils (Fig.
9B-D). At high magnification, Krp1 staining is often punctate and
periodic, exhibiting spacings from 0.5 to 1.0 µm
(Fig. 9E, arrowheads). Krp1 is
often localized near narrow myofibrils that appear to be fusing laterally with
more mature striations (Fig.
9E, arrows). The example in
Fig. 9E shows Krp1 staining in
the region where the myofibrils appear to be fusing laterally (arrows), but
not in a region of the same myofibril that appears to have already undergone
this fusion process (asterisk).
|
|
![]() |
Discussion |
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|
Although we tested rabbit muscle -actinin, rat Krp1, and chicken
gizzard filamin for binding to mouse N-RAP, the proteins used are highly
conserved between species. For example, the muscle isoforms of
-actinin,
-actinin-2 and
-actinin-3, are functionally
redundant (Mills et al.,
2001
), and are 98% conserved from mice to humans (GenBank
accession numbers P35609, Q9JI91, AAC62512, and Q08043). Likewise, rat and
human Krp1 are 97% conserved (Spence et
al., 2000
) (GenBank accession numbers Q9ER30 and O60662). Finally,
filamin is encoded by a highly conserved multigene family
(van der Flier and Sonnenberg,
2001
), and chicken gizzard filamin is 79% similar to human
filamin-2 (GenBank accession numbers BAB63943 and AAF80245). Taken together,
our results show that
-actinin, Krp1 and filamin can bind specific
regions of N-RAP in vitro as well as in a living eukaryotic cell.
-actinin is the major component of muscle Z-lines
(Stromer, 1995
), and one of
the earliest components to be organized during myofibril assembly
(Carroll et al., 2001
;
Carroll and Horowits, 2000
;
Dabiri et al., 1997
;
Ehler et al., 1999
;
Imanaka-Yoshida et al., 1998
;
Rhee et al., 1994
). It is
encoded by a multigene family, and the two isoforms
-actinin-2 and
-actinin-3 are expressed in striated muscle
(Mills et al., 2001
).
Previously, we had shown that N-RAP co-purifies with intercalated disk
fractions from adult mouse heart that are enriched for N-cadherin and contain
-actinin, but from which actin and myosin have been extracted
(Zhang et al., 2001
). We also
showed that
-actinin bound both the N-RAP LIM domain and the IB region
in a blot overlay assay (Zhang et al.,
2001
), in agreement with the results of the Ni-NTA magnetic beads
assay presented here. In cultured chick cardiomyocytes,
-actinin and
N-RAP are concentrated in the earliest myofibril precursors that form near the
membrane, as well as in more centrally located nascent myofibrils that exhibit
almost continuous
-actinin staining
(Carroll and Horowits, 2000
).
In addition, a GFP-tagged N-RAP-IB construct targets to Z-lines
(Carroll et al., 2001
).
Finally, overexpression of GFP tagged N-RAP-IB inhibits myofibril assembly
(Carroll et al., 2001
). Taken
together, the results indicate that the interaction between N-RAP and
-actinin occurs in living cells and is critical for initiating
myofibril assembly.
Filamin is also encoded by a multigene family
(van der Flier and Sonnenberg,
2001). The predominant striated muscle form is filamin-2, also
called filamin-C and gamma-filamin
(Thompson et al., 2000
;
van der Ven et al., 2000b
;
Xie et al., 1998
). As
illustrated in Fig. 2, filamin
contains an N-terminal actin-binding region followed by a series of 24 Ig
repeats; the muscle form also contains one hinge region between repeats 23 and
24. Our yeast two-hybrid results show that N-RAP binds the C-terminal region
of filamin that includes the last five repeats and the hinge region
(Fig. 2); however, these
results do not exclude the possibility that N-RAP binds elsewhere in the
filamin molecule as well. We mapped filamin binding to the N-RAP super repeats
in vitro. Filamin is found at the Z-lines in mature myofibrils
(Bechtel, 1979
;
Koteliansky et al., 1985
;
Price et al., 1994
;
Thompson et al., 2000
;
van der Ven et al., 2000a
;
van der Ven et al., 2000b
), as
well as at the intercalated disks in cardiac tissue and the myotendinous
junctions of skeletal muscle (Bechtel,
1979
; Koteliansky et al.,
1985
; van der Ven et al.,
2000a
). It is also found at the cell periphery, where it is
thought to interact with the transmembrane sarcoglycans present in
dystrophin-associated complexes (Thompson
et al., 2000
). As with N-RAP, we observed that filamin
co-localizes with premyofibrils and non-striated nascent myofibrils during
myofibril assembly (Fig. 7), in
agreement with previous findings (van der
Ven et al., 2000a
). Although exogenous filamin incorporates into
assembling Z-bodies as well as mature Z-bands in living cardiomyocytes
(Mittal et al., 1987
), we
found that
-actinin appears to organize into striations before filamin
becomes restricted to the Z-lines (Fig.
7).
Krp1 (kelch related protein 1) (Spence
et al., 2000), also called sarcosin
(Taylor et al., 1998
), is a
member of the kelch repeat superfamily of proteins
(Adams et al., 2000
). It
contains five C-terminal kelch repeats as well as an N-terminal BTB/POZ domain
(Spence et al., 2000
). The
Krp1 transcript is highly expressed in human and rat skeletal muscle
(Spence et al., 2000
;
Taylor et al., 1998
), as well
as in fibroblasts transformed with FBR murine sarcoma virus (FBR cells)
(Spence et al., 2000
). We
detected significant levels of Krp1 in embryonic chick cardiomyocytes as well
as in adult mouse skeletal muscle, but little or no Krp1 in adult mouse
hearts. Many kelch proteins bind actin and modify actin organization
(Adams et al., 2000
), and in
FBR cells Krp1 is found in pseudopodia at the tips of actin filaments
(Spence et al., 2000
). We
mapped Krp1 binding to the N-RAP super repeats and the N-RAP IB region in
vitro. In cultured embryonic chick cardiomyocytes, we found Krp1 at the
periphery of mature myofibrils that appeared to be joining laterally with
narrow myofibrils (Fig. 9).
This lateral fusion process is responsible for transforming myofibril
precursors into mature myofibrils with broad Z-lines
(Dabiri et al., 1997
). The
results suggest that Krp1 is involved late in myofibril assembly, and may
catalyze the lateral fusion of myofibril precursors.
Implications for myofibril assembly
Previously, we proposed that N-RAP functions as an organizing center during
the first steps of myofibril assembly, with the N-RAP LIM domain targeting to
a membrane-associated complex, the N-RAP IB region involved in binding
-actinin, and the N-RAP super repeats promoting actin polymerization
and appropriate integration with
-actinin
(Carroll et al., 2001
). This
model is strongly supported by more recent work showing that overexpression of
an N-RAP deletion mutant that is missing the super repeats disrupts actin
assembly while permitting normal Z-line assembly
(Carroll et al., 2002
).
However, details regarding essential steps before and after these key events
remain to be elucidated.
Importantly, the identity of the components responsible for tethering the
initial premyofibril assembly to the membrane remains unknown. -Actinin
(Figs 6,
7 and
9)
(Carroll et al., 2001
;
Carroll and Horowits, 2000
;
Dabiri et al., 1997
;
Ehler et al., 1999
;
Imanaka-Yoshida et al., 1998
;
Rhee et al., 1994
), N-RAP
(Fig. 6)
(Carroll and Horowits, 2000
),
and filamin (Fig. 7) (van der Ven et al., 2000a
)
are components of the earliest myofibril precursors near the cell periphery,
and their known binding partners identify candidates for the initial integral
membrane anchor in myofibril assembly. These candidates include integrins,
sarcoglycans, and cadherins:
-actinin
(Otey et al., 1990
) and
filamin (Goldmann, 2000
;
Loo et al., 1998
;
Pfaff et al., 1998
) can
directly bind the transmembrane ß-integrins, whereas N-RAP may link to
ß-integrins by binding talin (Luo et
al., 1999
). Muscle filamin can also bind sarcoglycans
(Thompson et al., 2000
),
whereas
-actinin may be coupled to the transmembrane cadherins through
its interaction with catenins (Kemler,
1993
; Knudsen et al.,
1995
; Nieset et al.,
1997
).
After the initial -actinin/actin assembly is formed, the complex
moves toward the cell interior, N-RAP leaves the complex, and the structures
fuse laterally to form mature Z-lines
(Carroll et al., 2001
). Filamin
also becomes restricted to the Z-lines during this time
(Fig. 7). The findings that
Krp1 localizes at the periphery of laterally fusing myofibrils
(Fig. 9), that Krp1 has kelch
repeats that may constitute multiple actin-binding domains
(Spence et al., 2000
), and
that Krp1 binds the N-RAP super repeats and the N-RAP IB region
(Fig. 5), and that these N-RAP
domains target to structures that contain actin and
-actinin,
respectively (Carroll et al.,
2001
), are all consistent with a role for Krp1 in the final steps
of myofibril maturation. We propose that Krp1 interaction with actin and N-RAP
catalyzes the dissociation of N-RAP from the premyofibril complex and allows
the lateral fusion of these structures to form mature myofibrils. Experiments
to test this hypothesis will bring us closer to understanding the molecular
mechanisms involved in myofibril assembly.
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Acknowledgments |
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References |
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