* Department of Plant Sciences and Sir William Dunn School of Pathology, Oxford, OX1 3RE, United Kingdom
The nuclear envelope consists of a doublemembraned extension of the rough endoplasmic reticulum. In this report we describe long, dynamic tubular channels, derived from the nuclear envelope, that extend deep into the nucleoplasm. These channels show cell-type specific morphologies ranging from single short stubs to multiple, complex, branched structures. Some channels transect the nucleus entirely, opening at two separate points on the nuclear surface, while others terminate at or close to nucleoli. These channels are distinct from other topological features of the nuclear envelope, such as lobes or folds.
The channel wall consists of two membranes continuous with the nuclear envelope, studded with features indistinguishable from nuclear pore complexes, and decorated on the nucleoplasmic surface with lamins. The enclosed core is continuous with the cytoplasm, and the lumenal space between the membranes contains soluble ER-resident proteins (protein disulphide isomerase and glucose-6-phosphatase).
Nuclear channels are also found in live cells labeled with the lipophilic dye DiOC6. Time-lapse imaging of DiOC6-labeled cells shows that the channels undergo changes in morphology and spatial distribution within the interphase nucleus on a timescale of minutes.
The presence of a cytoplasmic core and nuclear pore complexes in the channel walls suggests a possible role for these structures in nucleo-cytoplasmic transport. The clear association of a subset of these structures with nucleoli would also be consistent with such a transport role.
In recent years, the view that the nucleoplasm is organized into a number of morphologically distinct and
functionally significant domains has gained ground,
supported by increasing evidence for subnuclear localization of processes such as replication (Banfalvi et al., 1989 Although the morphological and functional subdomains
of the nucleus are not membrane bound, there is evidence
that isolated nuclei contain large amounts of phospholipid
and inositides and that activity of some nuclear enzymes
depends on the products of intranuclear lipids metabolism
for normal function (Maraldi et al., 1993 Recent advances in immunocytochemical detection of
phosphoinositols have permitted analysis of the intranuclear distribution of lipids that are not in the form of membranes (Mazzotti et al., 1995 Nucleocytoplasmic transport is bidirectional and energy
requiring; almost certainly the majority of this flow passes
through the nuclear pore complexes (NPC)1 that stud the
nuclear envelope (Dingwall and Laskey, 1992 Similarly, newly made ribosomes and mRNA probably
leave the nucleus through NPCs, but their routes from the
sites of intranuclear synthesis to the NPC remain obscure
(Rosbash and Singer, 1993 In this study we report a combination of serial section
transmission electron microscopy (TEM) and confocal laser
scanning fluorescence microscopy (CLSM) experiments
designed to characterize intranuclear membranes in more
detail and to provide a baseline for considering the functional significance of membrane bound structures in the
nucleus. Our results suggest that long, branching, intranuclear membrane channels are derived from the ER as
deep, narrow invaginations of the nuclear envelope. These
structures, which traverse deeply into the nucleoplasm and
may pass completely through the nucleus as the nucleoplasm forms an annulus in the process, are found in all tissue culture cell types examined. Primary cells in culture
also contain similar structures. The number of channels
and their morphological complexity vary widely but remain characteristic for a given cell type. Examination of the channels in living cells shows that these structures are
dynamic, changing position and morphology within the interphase nucleus. Some of the results described here have
been presented in abstract. (Vaux, D., M. Hollinshead,
and M. Fricker. 1994. The Eukaryotic Nucleus. Keystone
Symposium)
Chemicals
Vectashield antioxidant mountant and fluorochrome-conjugated horse anti-
mouse and horse anti-rabbit secondary antibodies were obtained from Vector Labs, Inc. (Burlingame, CA). Sterile trypsin solution, DME, and Liebowitz 15 media were obtained from GIBCO BRL (Gaithersburg, MD).
Fetal calf serum was obtained from Hyclone Labs (Logan, UT), and heat
inactivated for 30 min at 56°C before use. Other chemicals were analytical
grade and obtained from Sigma Chemical Co. (St. Louis, MO), Merck
Chemical Div. (Rahway, NJ), or BDH Chemicals Ltd. (Dagenham, Essex,
England).
Fluorescent Probes
Biotinylated or directly fluorochrome conjugated Con A was obtained
from Vector Labs, Inc. Fluorescein isothiocyanate-labeled immunoglobulin
(FITC-IG) fraction from normal goat serum, DAPI, and propidium iodide
(PI) were obtained from Sigma Chemical Co. 3,3 Primary Antibodies
A monoclonal antibody against a synthetic peptide corresponding to the
COOH terminus of protein disulphide isomerase was obtained from culture supernatant of the 1D3 hybridoma cell line. A rabbit polyclonal antiserum against an ER membrane fraction was the generous gift of Professor Daniel Louvard (Institut Pasteur, Paris, France). A rabbit polyclonal
antiserum against a peptide corresponding to the first 32 NH2-terminal
amino acids of human lamin A was the generous gift of Drs. George Simos
and Spyros Georgatos (European Molecular Biology Laboratory, Heidelberg, Germany). This antiserum recognizes lamins A, B, and C from a
wide range of mammalian and avian species.
Cells
HeLa, Vero, NRK, 3T3, CHO, A431, J774, RAW, G8, C2, and NOR10
cell lines were maintained in culture at 37°C in 5% CO2 in DME supplemented with 10% heat inactivated fetal calf serum. Cells were removed
from stock flasks with trypsin and plated onto sterile 25-mm diam coverslips at least 1 d before use. Primary cells were obtained from the peritoneal cavity of BALB/c mice by sterile lavage and placed in culture for 1-3 d
before use.
Tissue Sections
Rats were perfusion fixed using a periodate/lysine/paraformaldehyde fixative, and 10 µm frozen sections from blocks of a range of tissues were collected on gelatinized glass slides, as described (the slides were provided by P. Tree and L. Darley (Sir William Dunn School of Pathology, UK), following the procedure described for mice by Hughes et al., 1995 Serial Section Electron Microscopy
For conventional microscopy, cells were washed with ice cold PBS and
fixed in 0.5% glutaraldehyde in 200 mM sodium cacodylate, pH 7.4, for 30 min, and then washed in buffer and postfixed in 1% osmium tetroxide/
1.5% potassium ferrocyanide for 60 min at room temperature. After
washing in water and then staining in 0.5% mg uranyl acetate overnight
at 4°C, the cells were left attached to the culture dish and flat embedded
in Epon. Sections 70-90 nm thick were cut and collected either onto 50 mesh or slot grids, contrasted with lead citrate, and examined using two
microscopes (EM1O at 60 kV; Philips Technologies, Cheshire, CT; EM912
at 80 kV; Zeiss, Inc., Thornwood, NY).
For the cytochemical staining of G-6-Pase, we used a minor modification (Griffiths et al., 1983 Cryoimmunoelectron Microscopy
HeLa cells were fixed for 10 min at 4°C in 4% paraformaldehyde in 250 mM Hepes (pH 7.4) and then transferred into 8% paraformaldehyde in
Hepes at room temperature for at least 20 min, removed from the plastic
culture dish with a rubber policeman, and spun to a pellet. Fresh 8% paraformaldehyde was added to cross-link the cell pellet for another 30 min at
room temperature. They were then washed in Hepes, infiltrated with sucrose, and frozen in liquid nitrogen. Thin sections of frozen cells were cut
and labeled according to published procedures (Tokuyasu, 1980 Lectin and Antibody Labeling of Cells
Cells on 25-mm coverslips were washed twice with Ca2+ and Mg2+ free
PBS at room temperature and then fixed either in methanol at Scrape Loading of Cells
HeLa or NRK cells were plated in 60-mm diam tissue culture dishes and
allowed to grow to 90% confluence. The monolayers were washed twice
with ice cold PBS, and the cells were scraped from the dish in 0.5 ml of
ice cold PBS containing 10 mg/ml of FITC conjugated normal goat immunoglobulin (150) using a soft rubber policeman. The cells were allowed
to stand on ice for 5 min and then diluted in 10 ml ice cold complete medium and pelleted by centrifugation at 400 g for 5 min. The cells were
resuspended in complete culture medium and plated onto 25-mm diam
coverslips. The samples were either examined live or after fixation in 4% PFA.
Low Light Level Fluorescence Microscopy
The microscope (Axiophot; Zeiss Inc.) was equipped with a 50 W mercury
arc lamp for epifluorescence illumination, a 100× 1.3 NA Plan Neofluar
oil-immersion objective, and an Optivar set at 1.25×. Images were captured using a cooled CCD camera (CDC 242 Peltier; Hamamatsu Phototonics K.K., Hamamatsu City, Japan) under the control of software (BioVision; ImproVision Ltd., Warwick, UK) running on a Macintosh Quadra
900 computer. Optimal settings were obtained by adjustment of camera
gain and offset and on-chip integration time, using the intensity histogram
to ensure that the range of fluorescence intensities fell within an 8 bit recordable range. Settings were optimized individually for each fluorochrome and then held constant for all samples in a given experiment. Images were stored as 8 bit greyscale files. Serial Z axis images separated by
0.5-µm steps were collected using a motor driven focus system under computer control (BioVision, ImproVision Ltd.). The 8 bit images from each
fluorochrome were median filtered with a 3 × 3 kernel and merged using
the 24 bit merge capability of Adobe Photoshop. No other processing was
used in the images displayed here. Vitally stained cells were also examined with the low light level CCD system attached to an inverted microscope (Axiovert; Zeiss Inc.) with a temperature controlled stage.
Confocal Microscopy
Two confocal microscope systems were used. The first was based on a
scan head (MRC600; BioRad Laboratories, Cambridge, MA) attached to
a Nikon Diaphot TMD inverted microscope with modification of the laser
excitation path to provide co-aligned beams from a number of different lasers including 488-nm line (25 mW Argon-ion; Ion Laser Technologies
Ltd., Salt Lake City, UT) and 543-nm line (1.3 mW Gre-Ne; Melles-Griot,
Rochester, NY) introduced through single-mode fiber optics (Fricker and
White, 1992 The second system comprised an MRC 1000 scan head attached to a
Nikon Diaphot 300 inverted microscope with excitation at 488 nm, 568 nm,
and 647 nm (15 mW Argon-Krypton; Ion Laser Technologies Ltd). Fluorescence emissions were collected at 522 ± 35 nm for fluorescein, 605 ± 32 nm for rhodamine, Texas red, and propidium iodide, and 680 ± 32 nm
for To-Pro-3 using a Nikon 60× 1.4 NA Plan Apochromat oil-immersion
objective.
Three dimensional (3-D) datasets were collected with an XY pixel
spacing of 0.05-0.09 µm/pixel for fixed cells and 0.18 µm/pixel for live cell
recordings and a focus motor (z axis) increment of 0.4 or 0.5 µm. Individual frames were averaged or Kalman filtered over four to eight frames.
The gain required to visualize the intranuclear structures was often sufficient to saturate signal from the ER outside the nucleus.
Image Reconstruction and Display
3-D confocal images were median filtered using a 3 × 3 box and visualized
using software (ThruView Plus; BioRad Laboratories) as a rotation series
of height-coded projections (White, 1995 Vital Staining and Live Cell Confocal Microscopy
For live cell analysis, small tissue culture dishes were prepared by gluing 1-cm
deep Perspex cylinders (OD 25 mm, ID 19 mm) onto 25-mm diam coverslips using a silicone liquid adhesive and sterilizing them in 100% ethanol
before use. This arrangement permitted the use of oil immersion objectives on an inverted microscope with a temperature controlled stage for
either low light level CCD or laser scanning confocal microscopy. The
cells were transferred to Liebowitz 15 medium containing 10% fetal calf
serum (L10) to remove the requirement for a 5% CO2 atmosphere during
examination. Similar results were obtained in short term experiments by
sealing a second coverslip to the top of the dish with vacuum grease after equilibration of the contents at 5% CO2, but this system maintains pH for
only 30 min. Preliminary experiments using <20 mM Hepes to buffer normal growth medium revealed substantial changes in cell morphology, as
described previously (Bowers and Dahm, 1993 Cells were labeled with dihydroethidium (diHE) at 1 µg/ml in complete
culture medium for 90 min at 37°C, DiOC6 at 0.5 µg/ml in complete culture medium for 10 min at 37°C, and then examined with the CLSM at
37°C. Complete 3-D data sets were collected from a field, ~70 × 50 µm
containing a small number of cells (usually 5-10). Taking care to minimize
movement of the stage and the cell monolayer, the modified tissue culture
dish was then perfused with PBS, followed by methanol at For time course experiments, live cells were prepared and labeled as
above, and then imaged using the 488 nm line of a 15 mW krypton-argon
laser on a microscope (MRC 1000; BioRad Laboratories) running in low
power mode and with maximum attenuation with neutral density filters
(equivalent to 0.3% transmission for full power mode) it was possible to
collect up to five complete 3-D images (20 sections, 4 frame Kalman filter)
from a single cell before the signal intensity became unacceptably low.
TEM Identifies Tubular Membrane Profiles within
the Nucleoplasm
Examination of tissue culture cells sectioned parallel to the
growth substrate after in situ embedding revealed frequent
membrane profiles within nuclei. Fig. 1, a-j shows 10 consecutive 70-nm sections through an oriented 3T3 nucleus
(a low magnification view is shown in k). The double
membraned figure in the center can be followed through
all sections. a grazes the nuclear envelope, giving en face
views of several nuclear pore complexes; the dark structure to the left is an HRP-loaded endosome within the cytoplasm. The predominant feature running through the series is a double membraned channel surrounded by an
electron dense coat and with an electron lucent core. Additional, finer strands of membrane are associated with
this larger structure (for example, Fig. 1, g-j). Small electron dense particles may be found attached to the inner
membrane of the lucent core (Fig. 1 e).
A double membrane ring was the predominant morphology of membrane channel in 3T3, NRK, A431, and
HeLa cells (Fig. 2). The annular double membranes frequently contain local fenestrations indistinguishable from
nuclear pores sectioned transversely at the nuclear envelope (compare Fig. 2 a and the higher magnification inset
in d with the nuclear envelope shown in e).
To test the possibility that these tubular membrane figures form extensions of ER membrane, we studied cells
labeled histochemically for an ER marker, glucose-6-phosphatase (G-6-Pase). The lumen between the two membranes of the intranuclear tubules is decorated with the
histochemical reaction product for G-6-Pase, confirming an ER origin (Fig. 3). Both short stubs of ER extending
into the nucleoplasm and long channels that persist as
double membrane extensions throughout the sections can
be seen. The latter are distinct from the plate-like infoldings of the nuclear envelope that are characteristic of certain cell types, such as the polymorphonuclear leukocyte.
The histochemical reaction product fills the lumen of the
ER, the intermembrane space of the nuclear envelope,
and the intranuclear channels, but is excluded from nuclear pores in both the nuclear envelope and the intranuclear channels. Shallow angle sections through the margins
of nuclear channels (e.g., Fig. 3 a, top left) show that the
number of nuclear pores per unit area in the channels is
comparable to that in the bulk nuclear envelope (Fig. 3 d,
top left).
The high electron density of the lumenal reaction product highlights the presence of fronds of membrane extending into the lumen of the channel as discrete clumps on the
wall of a long channel (Fig. 3 d). Sometimes they appear to
invade the core of a channel as a fine finger of ER from
the cytoplasm, as can be well seen in the short channel at
top left (Fig. 3, a-e).
Intranuclear Con A Binding Sites Form Linear Arrays
Fluorochrome conjugated Con A labels the endoplasmic reticulum and nuclear envelope. Confocal microscopy showed
it also labels a limited number of nucleoplasmic sites in all
cell lines examined (Fig. 4). This Con A labeling was completed via mannose-terminated oligosaccharides, because
binding was abolished by competition with
The dataset illustrated in Fig. 4, consisting of 12 XY
planes, was used to construct a height-encoded, 3-D view
of nuclear volume seen from below with the basal cytoplasm removed. Different tilted views of the reconstruction confirmed that the channels were often orthogonal or
near-orthogonal to the growth substrate. In addition, near
horizontal Con A positive nucleoplasmic channels were
also seen.
Intranuclear Membranes Are Found in Many
Cell Types
To see how widespread intranuclear tubules were, we examined a range of cell types by labeling with Con A, followed by confocal microscopy and 3-D visualization. Labeled channels were found in all cell types tested, at
varying frequencies. In non-synchronized populations not
all cells contained detectable intranuclear Con A positive
structures. However, by increasing the sensitivity (i.e., by
using conditions that gave saturating levels of signal from
the ER and nuclear envelope), we could detect more intranuclear structures. This suggests that some nuclear structures are either smaller than many cytoplasmic ER features or that they contain fewer accessible Con A binding
sites. 3-D reconstruction of nucleoplasmic Con A positive
channels from several cell types showed that some cells
contained only a single tubule, and others contained a complex branching network. Fig. 5 illustrates the various degrees of complexity of the network seen in five different
cell types.
NRK cells (Fig. 5 E) tend to have few intranuclear channels, almost invariably oriented vertically to the growth substrate and often offset within the nucleoplasm. HeLa cells
(Fig. 4) tend to have a larger number of channels and more
channels that are not vertically oriented to the growth substrate. Primary mouse peritoneal exudate cells in culture
also show intranuclear membrane channels, often single and
usually vertical to the growth substrate (Fig. 5 D). 3T3,
CHO, and G8 cells (Fig. 5, A-C, respectively) have a more
complex, frequently branched network.
We counted channels in complete 3-D datasets of >80
nuclei of each cell type (Fig. 6). We used a strict definition
of a channel. It must extend at least 1.5 µm in X, Y, or Z to
exclude short indentations found in some cell types (especially along the basal-nuclear margin) and residual "tails"
of fluorescence along the Z axis from intense labeling of
the nuclear envelope or cytoplasmic structures. More than
60% of NRK cells do not have such channels, whereas >90% of CHO cells contain at least one, with half having
three or more. We found no cell type with fewer channels
than NRK cells, nor any cell type with a more abundant
array than CHO cells.
The differences were reproducible over time, as shown
by the independent counts for NRK cells carried out 4 mo
apart (Fig. 6, NRK-1 and NRK-2).
The presence of channels in >90% of the cells in an unsynchronized CHO population suggested that these structures could not be restricted to early postmitotic cells in G1.
Double labeling of unsynchronized cell populations with
Con A and an antibody to the cell cycle-dependent antigen, PCNA, confirmed that the abundance of channels
found in S phase nuclei was not lower than the abundance
measured over the entire interphase population (data not
shown; a complete analysis of the cell cycle dependence of the nuclear channels as described here will be presented
elsewhere (Vaux, D., M. Hollinshead, N. White, and M. Fricker, manuscript in preparation).
Channels were found in the nuclei of a predominantly
differentiated, postmitotic primary cell population (3 d adherent mononuclear cells cultured from peritoneal lavage
of mice; Fig. 5 D) as well as cells from established cell lines
(Fig. 5, A-C and E). Similar structures were also seen in the
nuclei of normal rat hepatocytes in tissue sections (Fig. 7).
Varying numbers of channels per nucleus were seen in 10-µm
sections of perfusion-fixed rat liver; the figure shows nuclei
with a channel number ranging from 0 to 3. In this specimen
the mitotic index for hepatocyte nuclei was <0.2%.
Composition of the Channels
The serial section TEM, G-6-Pase labeling, and presence
of nuclear pores together suggest that the nuclear envelope invaginates to form these structures. If so, the invaginating membranes should contain ER membrane proteins,
the annular space between the double membranes should
contain soluble ER proteins, and the central lumen should
correspond to the cytoplasm. The nuclear channels could be
labeled with a monoclonal antibody directed against protein disulphide isomerase (PDI), a soluble resident enzyme
of the ER (Fig. 5 F); similar structures were labeled by an
antiserum recognizing ER membrane proteins (Fig. 5 G).
To test the possibility that the cores of the intranuclear
channels are not only topologically equivalent to the cytoplasm but are in continuity with it, we preloaded the cytoplasm with a high molecular mass (150 kD) fluorescent
tracer that was too large to pass through the nuclear pores.
The channels were filled with the tracer (Fig. 5 H), confirming that they were extensions of the cytoplasm.
Double labeling experiments confirmed that PDI (Fig.
8 A) was contained within the structures that bound Con A
(Fig. 8 B; compare arrows in A and B). PDI was also found
within the intermembrane space of channels seen by EM
(Fig. 2 f), with immunolabeling gold particles decorating
the nucleoplasmic membrane-bound channels.
If the channels are invaginations of the whole nuclear
envelope, then the electron dense material on the nucleoplasmic side of the double membrane seen by EM (Figs. 1-3)
might be similar to peripheral heterochromatin and include a structure similar to the nuclear lamina. Confocal
microscopy confirmed that the channels defined by Con A
(Fig. 9 a) are associated with lamins (Fig. 9 b), often in areas poor in nucleic acids (Fig. 9 c). These results were confirmed by colloidal gold immunocytochemistry at the EM level (Fig. 2 c).
Additional sites of intranuclear lamin staining, unassociated with membrane or Con A labeling, were also seen
(Fig. 9, a and b). These additional sites exhibited various
morphologies including punctate sites and extended linear
tracks, as is clearly demonstrated in the height-encoded reconstructions of the entire datasets for Con A labeling
(Fig. 9, d-f) and lamin staining (Fig. 9, g-i).
Association of Some Channels with Nucleoli
This was confirmed by confocal microscopy, after staining
nucleic acid with propidium iodide and channels with Con
A. The channels often ran through holes in nucleic acid
staining (Fig. 10, A and B) and ran up to, or past, nucleoli
(Fig. 10 C). Electron microscopy suggested that some of the
channels were closely associated with nucleoli (Fig. 2 b).
Double labeling of tissue sections of normal liver also
demonstrated an association between hepatocyte nucleoli
and Con A-labeled channels (Fig. 7, merged view of the left hand cell).
However, not all nucleoli show a closely associated
channel (Fig. 10 C, XY and XZ views), and some channels
show no apparent association with nucleoli (by light microscopy in Fig. 10 C, and by EM in Fig. 1 k).
Dynamic Channels are Present in Live Cells
We next excluded the possibility that the channels were
artifacts of cell preparation by visualizing them in living
cells. The presence of channels in cells scrape-loaded with
a 150-kD fluorescent tracer before fixation provided preliminary evidence that such structures are present in live
cells (Fig. 5 H). NRK, BHK, or HeLa cells in culture were
labeled with dihydroethidium and with the lipophilic dye,
DiOC6, whichis selectively concentrated into cellular membranes (including the ER). The ER, the nuclear envelope
(Fig. 11 a), and intranuclear structures (Fig. 11, a and b)
can then be seen in confocal optical sections cut through
the center of the nucleus in living cells. The labeling of nucleic acids with dihydroethidium confirms that the confocal optical sections are indeed through the center of the
nuclei (Fig. 11, e and f).
We next confirmed that the intranuclear membranes that
label with DiOC6 are the same structures that were visualized after fixation using Con A, by a sequential labeling
experiment carried out on the stage of the confocal microscope. Fig. 11: (a) shows a single XY plane from the dataset for two DiOC6 labeled cells; (e) shows the dihydroethidium label in the same plane. Fig. 11 (b and f) are from data
collected 20 min later. The upper nucleus has changed
considerably in shape. After methanol fixation, the DiOC6
signal is lost (c), but the cells remain intact; and some dihydroethidium label persists (g). After Con A labeling, the intranuclear channels originally labeled by DiOC6 are seen
to be labeled with Con A. The result shown for a single
plane in Fig. 11 (a-g) is confirmed by 3-D reconstruction
in the lower part of Fig. 11. The DiOC6 labeled structures
found in the nuclei of live cells (Fig. 11, h-j) correspond to
the Con A positive structures found in fixed permeabilized
cells (Fig. 11, k-m); fixation causes little apparent change
to their morphology at the light microscope level.
We next observed the dynamics of the channels by incubating cells with DiOC6 and collecting repeated complete
3-D images over 35 min (Fig. 11, n-p); the channels clearly
persist over this timescale. Some channels do not change
position within the nucleus but do alter their morphology,
while others alter their position.
The results reported here suggest that the nucleoplasm of
mammalian cells contains long, dynamic, branching membrane channels that are derived from the ER as deep, narrow invaginations of both membranes of the nuclear envelope. Nuclear invaginations with a range of morphologies
have been reported in EM studies on mammalian nuclei
(Bourgeois et al., 1979 Single image planes, whether optical sections in the confocal microscope or thin sections in the TEM, do not allow
unambiguous identification of tubular channels. Consequently, all data presented here have been analyzed in
three dimensions, after reconstruction from serial sections
obtained using the confocal microscope, or TEM. This approach permits the unambiguous identification of tubular incursions, distinct from flat plates or folds, that would be difficult to identify without such a 3-D analysis. Furthermore, the nuclear channels are seen in live cells and so
cannot be artifacts of the fixation or immunocytochemistry.
3-D analysis demonstrates that channels are entirely distinct from the folds that render the nuclei of some cell
types lobulated (e.g., polymorphonuclear leukocytes). In
particular, channels are unrelated to the constricting furrows in the surface of the nuclear envelope that may be associated with bands of intermediate filaments (Kamei, 1994 The channels described here all consist of a cytoplasmic
invagination bounded by a double membrane. This makes
them quite distinct from the structures described in insect
nuclei, where the invaginations are of the inner nuclear
membrane only, producing a structure with a core in continuity with the ER (Hochstrasser and Sedat, 1987 Double-membraned invaginations of the nuclear envelope in plant cells have been described (Dickinson and Bell,
1972 Invaginations of the mammalian nuclear envelope may
be single membraned or double membraned (Bourgeois
et al., 1979 Composition of the Channels
EM of serial sections showed direct connections between
the double-membraned intranuclear tubes and the double
membrane of the nuclear envelope. The double membranes of the nuclear envelope and the channels both contain nuclear pores. This topology is consistent with a deep
invagination of both the outer and inner nuclear membranes. Three lines of evidence support this view. Firstly,
both the ER lumen and the lumenal space between the
two membranes forming the boundary of the channels
contain protein disulphide isomerase (by CLSM, Fig. 5,
and by EM immunolabeling, Fig. 2), Con A binding sites
(Figs. 4 and 5), and glucose 6 phosphatase (Fig. 3). Secondly, the membrane proteins of the ER were found in the
peripheral ER, the bulk nuclear envelope, and the nuclear channels (Fig. 5). Thirdly, membranes of both ER and the
nuclear channels accumulated the lipophilic dye DiOC6
(Fig. 11). These results identify the channels as deep invaginations of both inner and outer nuclear membranes,
but cannot exclude the possibility that the composition of
the membranes forming the channel differs in detail from
that of the bulk nuclear envelope.
Our data strongly suggest that the majority of tubular
membranes within the nucleus contain a core of material
that is continuous with the bulk of the cytoplasm. The
space at the center of the double-membraned channels has
the electron density of cytoplasm in EM images, and such
an identity would be topologically plausible. This space
could be separate from bulk cytoplasm or accessible to it,
depending on the organization of the junctions between the intranuclear channels and the nuclear envelope. High
molecular weight tracers that are too large to enter the nucleoplasm through nuclear pores have access to the lumen
of the channels after scrape-loading into the cytoplasm,
confirming that the lumen is continuous with the cytoplasm. The lumen of nuclear channels is not always empty; ribosomes, small vesicles, and cytoskeletal elements have
all been seen. Thus, one effect of these structures is to
bring cytoplasmic space closer to the interior of the nucleus.
The nucleoplasm around the nuclear channels has an increased electron density similar to that seen in peripheral
heterochromatin adjacent to the nuclear envelope (Fig. 1).
Light and EM immunocytochemistry confirm that in both
cases these electron-dense areas include a lamina containing nuclear lamins (Figs. 2 and 9). Several recent reports
suggest that the nuclear lamin proteins are not confined to
a lamina at the nuclear periphery, but may be found at focal sites throughout the nucleoplasm (Goldman et al., 1992 Distribution and Dynamics of the Channels
Nuclear channels were found in all cell types examined, including cultured primary cells (macrophages explanted
from the peritoneal cavity). The number of channels and
their morphological complexity vary widely but remain
characteristic for a given cell type and do not change significantly over time (Fig. 6). The organization of the channels with respect to the growth substrate is characteristic for each cell type, and this also remains stable for a given
cell type over time in culture. The abundance of channels
orientated vertically with respect to the growth substrate
could depend in part on the better visibility of such structures by light microscopy, but this cannot be the whole explanation since the same bias was seen in oriented serial
EM section analyses.
Channels are not restricted to transformed cell lines in
culture, as they are also found in cultured primary peritoneal exudate cells (Fig. 5 D), which are predominantly
postmitotic, differentiated macrophages in these preparations, and in nuclei of normal hepatocytes in tissue sections (Fig. 7). Furthermore, the presence of channels in
these postmitotic nuclei suggests that such structures are maintained in cells that are not cycling.
Within individual tissue culture cells, although the channels may persist for hours in interphase nuclei, they may
also rapidly change their morphology and position within
the nucleoplasm on a timescale of minutes. We cannot exclude the possibility that some of these changes are the indirect result of gross changes in nuclear shape. However,
de novo production of channels in interphase nuclei was
not observed.
Possible Functional Implications of Nuclear Channels
Collectively, these data leave little doubt that there are
widespread incursions of double ER membranes into the
depths of the nucleoplasm in many cell types. Since the nuclear envelope is disassembled into vesicles during mitosis,
it is most likely that the channels are formed during nuclear envelope reassembly. Chromatin becomes coated
with bound nuclear envelope vesicles while decondensation is progressing; such vesicles penetrate between chromosomes and produce a deeply convoluted layer. These
convolutions may be resolved by chromatin decondensation to produce a uniform convex vesicle layer; fusion of
such a layer would produce a nuclear envelope devoid of
deep channels. However, if the vesicle fusion event precedes complete decondensation, a complex, channel-rich nuclear envelope may be produced. Thus, the channels
may arise as a result of incomplete resolution of invaginations during nuclear envelope reassembly; differences in
channel morphology between cell types could then result
from differential rates of chromatin decondensation and
nuclear envelope vesicle fusion. It is possible that the slow
resolution of channels could continue after vesicle fusion
and, indeed, perhaps continue into interphase. In this case,
the channels described might simply represent nonfunctional remnants of the process of nuclear envelope reassembly; their presence might even be deleterious for the
cell.
There are three pieces of evidence that suggest that, although channels may originate in this way, they are not
nonfunctional remnants. First, channels persist for long
periods in interphase cells. More than 90% of CHO cells
in a nonsynchronized culture have one or more channel,
and this proportion suggests that most interphase CHO
cells still have not resolved their channels, whether they
are in G1, S or G2 phases of the cell cycle. Second, channels may be found in postmitotic populations (such as the
primary peritoneal exudate cells and normal tissue hepatocytes examined in this study), again implying that the
structures described here are not resolved in such populations. Third, if the channels represented mitotic remnants,
it is not easy to explain the association with nucleoli that
has been described (Bourgeois et al., 1979 One plausible function of such invaginations is to bring
a larger proportion of the nucleoplasm close to a nuclear
pore. For a spherical nucleus 5 µm diam, 60% of the nucleoplasm lies within 0.5 µm of the nuclear envelope, and
the center of the nucleoplasm lies at 2.5 µm away from it.
However, a single tube traversing the nucleus halves the
maximum distance from any point in the nucleoplasm to
the envelope and brings a further 12% of the nucleoplasm within 0.5 µm of the envelope. Three or four appropriately
placed tubes would bring almost all of the nucleoplasm
within a distance of 0.5 µm of the envelope.
This means that even nucleoli which are buried within
the nucleus may lie close to the envelope. A function of
nuclear channels in transport processes has been suggested in measles virus-infected hamster cells, where an
association between tubular invaginations and nucleoli
was reported (Dupuy-Coin et al., 1986 Taken together, these results and the data presented
here suggest that the traditional view of the nuclear envelope as an approximately spherical coat defining the nucleoplasm is at best an incomplete one. Deep tubular incursions into the nucleoplasm occur sufficiently often in the
population to warrant inclusion in any discussion of structure-function relationships in the envelope of mammalian
interphase nucleus.
;
Mills et al., 1989
; Hozak and Cook, 1994
; Hutchison et al.,
1994
), repair (Jackson et al., 1994a
, b), transcription (Jackson et al., 1993
; Wansink et al., 1993
), and RNA splicing and processing (Huang and Spector, 1991
; Xing and Lawrence, 1993
; Xing et al., 1993
). In some cases these localized functions, or proteins associated with them, can be
correlated with specific subnuclear structures, identified
either morphologically or immunocytochemically at the
light or EM level (Carmo-Fonseca et al., 1991
, 1992; Spector et al., 1991
; Lamond and Carmo-Fonseca, 1993
; Huang
and Spector, 1996
; for review see Strouboulis and Wolfe,
1996
). Although these intranuclear domains or structures
are not bounded by membranes as cytoplasmic organelles
are, they appear to offer a means of segregation of function in much the same way as organelles in the cytoplasm
do; such an analogy has already been suggested (Spector, 1990
; Moen et al., 1995
).
). Isolated nuclei
that lack the membranes of the bulk nuclear envelope still
contain phospholipid as well as polyphosphoinositides. Indeed, it has been suggested that a separate inositide phosphorylation-dephosphorylation cycle might exist within the
nucleus (Divecha et al., 1991
; Banfic et al., 1993
). Much of
this nuclear lipid is presumed to exist as proteolipid complexes, most probably associated with a nucleoskeletal matrix, as it is not removed by detergent extraction with Triton X-100 (Divecha et al., 1993
; Mazzotti et al., 1995
).
). However, there have also
been suggestions that some of this nuclear lipid is in the
form of recognizable bilayer membranes. Intranuclear
membrane extensions have been described in plant cells
(Dickinson and Bell, 1972
; Li and Dickinson, 1987
), insect cells (polytene cells of the Drosophila melanogaster salivary gland; Hochstrasser and Sedat, 1987
; Parke and de
Boni, 1992), and mammalian cells (Bourgeois et al., 1979
;
Stevens and Trogadis, 1986
). Single and double membrane
invaginations have been identified, and an association with
evaginations of the nuclear envelope into the cytoplasm
has also been described (Parke and de Boni, 1992). Experimental demonstration of a statistically significant association of nuclear invaginations with nucleoli has led to the
suggestion that such structures might play an important
role in nucleocytoplasmic transport (Bourgeois et al.,
1979
).
; Hinshaw et al., 1992
; Rout and Wente, 1994
). Despite the identification of nuclear targeting signals, little is known of the routes by which imported polypeptides move from the NPC to their
specific subnuclear compartment within the nucleoplasm.
Recent results have suggested that proteins capable of repeatedly shuttling between the nucleus and the cytoplasm
may play an important role in these processes (Laskey and
Dingwall, 1993
; Schmidt-Zachmann et al., 1993
). EM immunocytochemistry hints at the possibility that a nuclear
skeleton may provide tracks for the shuttling movement of
these proteins (Meier and Blobel, 1992
).
). Again, linear tracks have
been observed in some experimental systems by in situ hybridization, suggesting the possible involvement of a nucleoskeleton and reinforcing a linear production line model for postsynthetic processing (Lawrence et al., 1989
; Xing
and Lawrence, 1993
; Xing et al., 1993
; Moen et al., 1995
).
Other experimental systems have not found evidence for a
tracked route of RNA transport through the nucleoplasm,
but rather, suggest a diffusion through a network of channels preferentially accessible to nascent RNA (Zachar et al.,
1993
). Interestingly, even in the cases where nascent transcripts formed extended intranuclear tracks, the majority of these tracks was not observed to reach the nuclear envelope (Rosbash and Singer, 1993
; Xing et al., 1993
, 1995
).
The presence of a draining network of intranuclear membrane bound channels could account for this unexpected
observation.
Materials and Methods
-dihexyloxacarbocyanine iodide (DiOC6), lysine-fixable fluorescein isothiocyanate-dextrans,
fluorochrome-conjugated streptavidin, To-Pro-3 iodide, and dihydroethidium (DiHE) were obtained from Molecular Probes Inc. (Eugene, OR).
). Before use,
the tissue sections were permeabilized with 0.2% (vol/vol) Triton X-100 in
PBS for 15 min and quenched in fresh 50 mM ammonium chloride solution for 15 min, both at room temperature. Sections were labeled for 45 min with a mixture of 4 µM To-Pro-3 iodide and 10 µg/ml TRITC Con A
in PBS at room temperature before washing four times in PBS, mounting
in Vectashield, and examining by confocal microscopy.
) of the procedure developed by Wachstein and
Meisel (1956)
. To optimize staining of AtT-20 cells for G-6-Pase we found
it necessary to fix the cells in <1% glutaraldehyde and to incubate the
fixed cells with the substrate solution for 2 h at 37°C.
; Griffiths
et al., 1984
).
20°C for
6 min or in 3% paraformaldehyde (PFA) in PBS for 10 min at room temperature. Coverslips were then washed in PBS and stored at 4°C for up to
3 d before labeling. Before labeling, PFA fixed samples were permeabilized with 0.2% NP-40 in PBS for 5 min at room temperature. For indirect
lectin labeling, coverslips were first incubated with 10 µg/ml of biotinylated lectin in PBS for 30-60 min at room temperature, washed four times
in PBS, and then incubated in 1 µg/ml fluorochrome conjugated streptavidin in PBS for 30-60 min at room temperature. After washing, coverslips were mounted using a glycerol based mountant containing anti-oxidants to minimize photobleaching (Vectashield; Vector Labs, Inc.). For direct
labeling, fluorochrome conjugated lectins were used at 5 or 10 µg/ml in
PBS for 30 min at room temperature. Indirect immunofluorescence was
carried out as described previously. Most samples were also counterstained with 0.1 µg/ml DAPI for 5 min during the final wash before
mounting. Samples were examined using either a microscope equipped for
epifluorescence illumination and a low light level CCD camera (Axiophot; Zeiss Inc.) or a CLSM.
; Fricker et al., 1994
). Neutral density filters were used to
roughly balance the intensities of the two beams. Fluorescence emissions
were collected at 540 ± 15 nm and >600 nm using a Nikon 60× 1.4 NA Plan apochromat oil-immersion objective.
). Typically the interior of the nucleus was viewed from the coverslip side, omitting the first two to three
sections at the base of the cell that contained the thin layer of peripheral
cytoplasm and nuclear envelope. An intensity threshold was manually selected to retain detail of the intranuclear channels. The first occurrence of
a pixel above this threshold was recorded along the line of sight for each
angle in the rotation series and displayed as a height-coded image, where
intensity represents the Z position of the pixel, white nearest the viewer,
black furthest away (White, 1995
). Smooth animations for inspection were
calculated with rotation steps of 4° and a constant tilt angle of 30°. The
Z-stretch factor required to compensate for the asymmetric sampling in X,
Y, and Z was calculated from the focus motor increment to account for the difference in refractive index between the oil-immersion fluid, coverslip, and mounting medium (White et al., 1996
). This correction factor was
calculated using a weighted average of rays across the full NA of the lens.
An average factor of 0.829 was used for cells in Vectashield, and a factor
of 0.7 was used for live cells. Voxel dimensions in these images are thus
approximately scaled as a 1 × 1 × 1 aspect ratio.
), which were not seen
when L10 was used.
20°C, which
was left on the cells for 6 min (i.e., comparable to the fixation conditions
used to prepare fixed cells for labeling). 3-D datasets were collected during fixation. The DiOC6 signal was extracted completely from the cells by
the methanol within 30 sec. After fixation, the dish was perfused with PBS
to wash the monolayer. The cells were then labeled using fluorochromeconjugated Con A that was added through the perfusion cannula. Further
3-D datasets were collected from the original field of cells during the next
20 min as the Con A stain gradually developed.
Results
Fig. 1.
Serial section EM reveals complex membrane-bound networks within the nucleus. Consecutive 70-nm serial sections from a
region of a 3T3 cell nucleus sectioned parallel to the growth substrate are shown in a to j. Section a begins at the nuclear envelope; note
the en face nuclear pore complexes and the dark mass of an HRP-loaded endosome in the cytoplasm to the left of the invaginating membranes. The position of the channel within the nucleus is shown in the low magnification overview in k; clearly visible within the nucleoplasm are nucleoli that are not apparently associated with this channel. Bars: (a-j) 200 nm; (k) 1 µm.
[View Larger Version of this Image (149K GIF file)]
Fig. 2.
The intranuclear
channels in a range of cell
types contain nuclear pore
complexes and are associated
with an electron dense halo
in the nucleoplasm. Representative profiles of channels from 3T3 cells (a), NRK
cells (b), A431 cells (d and
inset), and HeLa cells (f) are
shown. Double membrane
structures are clearly visible, together with local fenestrations, and comparable to the
appearance of the nuclear
pore complexes in the nuclear envelope of the 3T3 nucleus shown in e. The electron lucent core is also seen
to contain small circular or
crescent shaped features,
best seen within the channel
in b. Electron dense material
in the nucleoplasm is associated with the channels (a, b
and d, inset). In addition,
channel association with nucleoli is shown for NRK cells
(b). Thawed frozen thin section colloidal gold immunocytochemistry confirms that
the channels are associated
with strong immunoreactivity for lamins (c) and protein
disulphide isomerase (f), as
shown by the 9-nm gold particles decorating the intranuclear channels in these HeLa
nuclei. Bars: 200 nm; d, 1 µm.
[View Larger Version of this Image (144K GIF file)]
Fig. 3.
The intranuclear channels are bounded by a double membrane enclosing a G-6-Pase positive lumen. Consecutive 70 nm
serial sections of part of an ATt20 nucleus sectioned parallel to
the growth substrate after histochemical visualization of G-6Pase activity. Dense reaction product fills the space between the
inner and outer nuclear membranes but is excluded from nuclear
pore complexes. Similar reaction product is seen within the channels in the nucleoplasm. Bar, 500 nm.
[View Larger Version of this Image (111K GIF file)]
-methyl mannoside (not shown).
Fig. 4.
Intranuclear channels labeled with lectins recognizing ER-type oligosaccharide side chains and
visualized by confocal microscopy and 3-D reconstruction. Serial optical sections of
a Con-A-labeled HeLa nucleus were collected at 0.5 µm intervals by CLSM from
the base of the cell (1-12),
forming a 3-D XYZ image.
Fluorescent structures are
clearly visible within the nucleus in successive optical
sections. To visualize the
overall morphology of the
channels, the sections nearest
the base of the cell were discarded and views projected
at increasing tilt angles (30°
increments; A-C and F) and
rotation angles (24° increments; D-F). In these height
reconstructions, structures
above a threshold intensity
nearest the viewer are coded
as white for each tilt or rotation angle and also mask underlying structures. The major nuclear channel traverses
the nucleoplasm, contacting
the nuclear envelope at two
locations. In addition, a second, shorter tube that terminates within the nucleus is
also visible.
[View Larger Version of this Image (150K GIF file)]
Fig. 5.
Intranuclear channels vary in number and morphology
among different cell types, contain ER soluble resident proteins
and ER membrane proteins, and enclose a cytosolic core. Rotation series of height coded 3-D views at 24° intervals of 3T3 (A),
CHO (B), G8 (C), PEC (D), and NRK (E) cells labeled with fluorescent tagged Con A are shown. Reconstructions were made as
shown in Fig. 4. The nuclear channel morphology was characteristic for each cell type and ranged from multiple branched channels (e.g., G8 cells in C) to single unbranched channels (e.g.,
PECs and NRK cells in D and E, respectively). In addition to being Con A positive structures, channels were also visible in an NRK
nucleus labeled with a monoclonal antibody against the soluble
resident ER protein, protein disulphide isomerase (F), a HeLa
nucleus labeled with a polyclonal antiserum against ER membrane proteins (G), and a HeLa nucleus after scrape loading of
the cell with a 150-kD fluorescent tracer (H).
[View Larger Version of this Image (79K GIF file)]
Fig. 6.
Frequency histogram of nuclear channel distribution in
a range of cell types. Cells were labeled with fluorochrome
tagged Con A and 3-D datasets collected for >80 nuclei for each
cell type. The number of channels defined as an intranuclear labeled structure at least 1.5 µm in x, y, or z was counted by inspection of the serial optical sections.
[View Larger Version of this Image (77K GIF file)]
Fig. 7.
Nuclear channels are present in normal rat hepatocytes.
Perfusion-fixed sections of rat liver were labeled with fluorochrome-tagged Con A in a and the nucleic acid stain To-Pro-3 in
b. A two color merge of the data is shown in c. Note the association between the nucleolus and two channels in the left hand cell.
Bar, 5 µm.
[View Larger Version of this Image (60K GIF file)]
Fig. 8.
Intranuclear PDI immunoreactivity co-localizes with
Con-A-labeled channels. The figure shows separate eight-bit grey
scale images collected from a triple labeled NRK cell using a
cooled CCD camera. A shows the distribution of the PDI signal
in the fluorescein channel. B shows the Con A signal in the
rhodamine channel, and C shows the nucleic acid labeled with
DAPI. D is a 24-bit merge of the first three channels. The arrowhead points to an intranuclear structure that can be followed
through a number of focal planes in which PDI and Con A reactivity colocalize.
[View Larger Version of this Image (70K GIF file)]
Fig. 9.
Con A-labeled channels are associated with lamin immunoreactivity. Maximum projections of six consecutive optical
sections at 0.3 µm Z interval from a triple labeled HeLa nucleus
are shown; a shows Con A reactivity. b shows polyclonal antilamin reactivity, and c shows nucleic acid labeling with Yo-Pro 1. Associated XZ (above) and YZ (right) projections along the lines
indicated by the black arrowheads are also shown. The rotation
series of height-coded, tilted 3-D views at 24° intervals are presented for Con A labeling in d-f and lamin labeling in g-i. Each
of the Con A sites in the nucleus is colocalized with sites of lamin
reactivity, but note also that there are additional intranuclear
lamin reactive sites that do not have associated Con A reactivity.
Bar, 5 µm.
[View Larger Version of this Image (141K GIF file)]
Fig. 10.
Some channels that terminate within the nucleus are
associated with nucleoli. a shows Con A reactivity; b shows nucleic acid labeling with propidium iodide. c shows a two color
merge of the data from a and b. Two XZ views across the nucleus
at the level of the channels (arrowheads) are also shown.
[View Larger Version of this Image (78K GIF file)]
Fig. 11.
Nuclear channels
are detectable in live cells
and correspond to the Con
A-labeled structures seen in
fixed cells. a shows a single
plane from the dataset for
two DiOC6 labeled live cells; e shows the dihydroethidium
label in the same plane. b
and f are from data collected
20 min later. c shows the loss
of the DiOC6 signal at the
end of methanol fixation,
while g shows that the cells
remain intact and the dihydroethidium label persists,
although reduced in intensity. d shows the same cells
and plane after 20 min of
Con A labeling. h-j show sequential rotations of reconstructions of DiOC6 labeled
cells, and underneath in k-m,
respectively, the same cell is
shown after Con A labeling.
Cutaway views of a reconstructed DiOC6 labeled
HeLa nucleus from a separate experiment are shown at three time points in n-p.
Note that the morphology of
the larger left hand tube alters over the 35-min period,
and the smaller channel
shows a progressively increasing separation from the
large channel. Bars: (a-m) 25 µm; (n-p) 2 µm.
[View Larger Version of this Image (107K GIF file)]
Discussion
; Dupuy-Coin et al., 1986
; Stevens
and Trogadis, 1986
), in insect nuclei (Hochstrasser and Sedat, 1987
; Parke and de Boni, 1992), and in plant nuclei (Dickinson and Bell, 1972
; Li and Dickinson, 1987
).
).
These latter structures are characterized by loops of bundled intermediate filaments constricting the nuclear envelope; they do not form independent intranuclear membrane profiles separated from the nuclear envelope, even
in confocal reconstructions (Kamei, 1994
). The absence of
detectable intermediate filaments may also result in irregularities of the nuclear envelope, characterized as prominent, multiple infoldings (Sarria et al., 1994
). The infoldings found in these vimentin-negative cells are clearly distinct
from the deep, narrow channels described in this study.
; Parke
and de Boni, 1992). Furthermore, detailed statistical analysis demonstrates that the single-membrane invaginations found in Drosophila nuclei are always associated with an
adjacent double-membraned evagination of the nuclear
envelope into the cytoplasm (Parke and de Boni, 1992).
These differences, together with the observation that the
core of the Drosophila invaginations are frequently filled
with large electron-dense granules (Hochstrasser and Sedat,
1987
) not seen in mammalian cells in this study, suggest that the structures we describe are unlikely to be closely
related to the invaginations described in Drosophila.
; Li and Dickinson, 1987
). These structures are developmentally restricted to a short interval in postmeiotic
gymnosperm microspores and have several features that
distinguish them from the channels described here. Firstly,
they are very short invaginations (maximum length, 0.9 µm);
secondly, they are very numerous (200-400 per nucleus)
and, thirdly, they are composed of membranes devoid of nuclear pores (Li and Dickinson, 1987
). These features
lead us to conclude that these plant cell structures are unlikely to be related to the large double-membraned channels found in mammalian nuclei.
). Double-membraned nuclear invaginations have
previously been described in serial section EM studies as
"nucleolar channels" because of an invariant association
with nucleoli (Bourgeois et al., 1979
; Dupuy-Coin et al.,
1986
). The results presented here confirm the presence of
invaginating channels terminating in, or adjacent to, nucleoli in nuclei from a variety of cell types. However, it is
clear that a combined CLSM and serial TEM analysis
demonstrates additional categories of intranuclear invagination, in some cases unrelated to nucleoli and even in
some cases having no intranuclear termination. Some channels (tubes) terminate within the nucleoplasm, others (tunnels) pass entirely through; some nuclei contain none, others many; some are simple, others branched. These overall
features may be seen by confocal microscopy. More detailed structure is revealed by serial TEM sections, where
the double membrane, the embedded nuclear pore complexes, the fine membrane processes, and the closed end of
the channel are all clearly visible. One of the most unexpected findings of the present study is channels that traverse
the nucleoplasm and have connections to two separate points on the nuclear envelope. This novel morphology
means that the nucleoplasm forms an annulus around the
channel. This is topologically quite distinct from any sheet-
or plate-like infolding of the nuclear envelope. In particular, these traversing channels cannot be removed from the
interphase nucleus without a membrane fusion or fission
event.
;
Bridger et al., 1993
). We confirm the presence of focal
lamin accumulations in the nucleoplasm and show that some
of these sites correspond to channels, while others do not
(Fig. 9), confirming that there are at least two classes of focal lamin sites within the nucleus, besides the peripheral
nuclear lamina (Belmont et al., 1993
; Bridger et al., 1993
). A
functional significance for intranuclear lamin B sites has
been suggested by colocalization of these sites with sites of
DNA replication in mid to late S phase (Moir et al., 1994
).
Interestingly, this association is confined to lamin B even
though intranuclear lamin A-C foci are also found (Goldman et al., 1992
), suggesting a still higher order of complexity for intranuclear distribution of lamins.
; Dupuy-Coin et al., 1986
). Although an answer to this question must await
further functional studies, we suggest possible functions
that the channels might serve.
). Indeed, a substantial number of channels contact the nucleolus or terminate within it, both in tissue culture cells and normal hepatocytes. However, we also find a clear category of nuclear
channels of varying morphology that have no apparent relationship with nucleoli, even when the entire nuclear volume is reconstructed in three dimensions and examined in
animated rotation. Such channels may be genuinely dissociated from nucleoli, with attendant functional implications. Alternatively, the channels detected at the LM level might represent only the larger "trunks" of branched structures, leaving undetected fine branches to communicate
with apparently distant nucleoli. The serial section EM data
confirms that there are very fine lateral branches associated with some nuclear channels, as may be clearly seen in
Fig. 1.
Received for publication 12 July 1996 and in revised form 15 November 1996.
The work was partially funded by grants from the Medical Research Council (to D. Vaux) and a major equipment grant from the Wellcome Trust (to D. Vaux). N.S. White is a Royal Society Industry Fellow.We thank Peter Cook for discussion and critical reading of the manuscript and the members of our groups for helpful discussions. We thank Dr. George Simos and Dr. Spyros Georgatos (European Molecular Biology Laboratory, Heidelberg, Germany) and Professor Daniel Louvard (Institut Pasteur, Paris, France) for the generous gifts of antibody. We thank Peter Tree and Liz Darley for providing the rat tissue sections.
CLSM, confocal laser scanning fluorescent microscopy; G-6-Pase, glucose-6-phosphatase; NPC, nuclear pore complex; PDI, protein disulphide isomerase; TEM, transmission electron microscopy, 3-D, three-dimensional.