From the Inositide Laboratory, Signalling Programme, The Babraham Institute, Cambridge CB2 4AT, United Kingdom
Received for publication, January 30, 2003
, and in revised form, March 19, 2003.
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ABSTRACT |
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INTRODUCTION |
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Withdrawal of serum or defined survival factors results in the inactivation of the Raf-MEK-ERK and phosphatidylinositol 3'-kinase (PI3K)/PKB survival signaling pathways. Two BH3-only proteins, Bad and Bim, have been implicated particularly in apoptosis following withdrawal of survival factors, and both are regulated by these signaling pathways. Bad is phosphorylated by PKB (6) and RSK1 (7), which facilitates it's sequestration by 14-3-3 proteins thereby preventing it from binding to Bcl-2. Withdrawal of survival factors results in the dephosphorylation of Bad, allowing it to bind to Bcl-xL and release Bax. In contrast, Bim is expressed de novo following withdrawal of survival factors or inactivation of the PI3K pathway (8, 9, 10, 11). In neurons the withdrawal of NGF results in activation of the c-Jun N-terminal kinase (JNK)-c-Jun pathway; this is required for increases in Bim mRNA (10). In contrast, in lymphocytes withdrawal of cytokines causes the inactivation of PKB, dephosphorylation of the forkhead transcription factor FKHRL1/FOXO-3A, and transcription of Bim (8).
In CCl39 cells, we have previously shown that, following serum withdrawal, the initiation of Bax activation and subsequent activation of caspases are both strongly inhibited by actinomycin D and cycloheximide (11). This finding suggests that de novo expression of Bim rather than dephosphorylation of pre-existing Bad is the most likely mechanism by which serum withdrawal-induced death is initiated. In these cells the (extracellular signal-related kinase 1 and 2 (ERK1/2) pathway acts independently of PI3K to prevent Bim expression and serum withdrawal-induced cell death, although the precise mechanism by which ERK reduces Bim levels is unclear (11). By comparing Bim mRNA and Bim protein expression, we now show that the rapid expression of BimEL following serum withdrawal cannot be accounted for simply by increases in mRNA following down-regulation of the PI3K/PKB pathway. We show that BimEL is phosphorylated in response to activation of the ERK1/2 pathway and that this targets BimEL for degradation by the proteasome pathway. Our findings provide new insights into the regulation of Bim and the role of the ERK pathway in cell survival.
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EXPERIMENTAL PROCEDURES |
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Cell CultureCulture of CCl39, CR111, and CM3 cells has been described previously (11, 12, 13). The ts20 CHO cells (14) were maintained in minimal Eagle's medium containing a HEPES buffer. For serum starvation, cells judged to be 5060% confluent were washed once in serum-free medium and then placed in fresh serum-free medium with the indicated dose of 4-hydroxytamoxifen (4-HT), FBS, inhibitors, or the relevant vehicle control for the times indicated in the figure legends. For emetine chase experiments, cells were starved for 18 h and then treated with emetine (10 µM) to block protein synthesis prior to further treatments. Cells were harvested at the indicated times for further analysis.
Real-time RT-PCRPreparation of total RNA was performed as described previously (11). RT-PCR was performed according to the protocol supplied with the Taqman® Reverse Transcription reagents (Applied Biosystems) as described previously (11). For hamster Bim we used 5'-TAAGGCAATCTCAGGAGGAACCT-3' as the forward primer and 5'-AGATTCGTTGAACTCGTCTCCAA-3' as the reverse primer. These primers are common to BimS, BimL, and BimEL. For hamster -actin we used 5'-CCGGATGCAGAAGGAGATCA-3' as the forward primer and 5'-GCCACCGATCCACACAGAGTA-3' as the reverse primer.
Western Blot AnalysisCells were lysed and analyzed by Western blot exactly as described previously (11, 12). For treatment with calf intestinal phosphatase, cells were lysed in lysis buffer without phosphatase inhibitors and then treated with 10 units of calf intestinal phosphatase in the presence of the appropriate buffer for 2 h at 37 °C.
Plasmids and TransfectionsHA-tagged BimEL was constructed by subcloning rat BimEL from the plasmid pcDNA-FLAG-BimEL (provided by Drs. Stephen Neame and Jonathan Ham) into the pcDNA3-HA plasmid. In-frame fusion to the HA sequence was confirmed by sequencing and by transient expression and immunoblotting.2 pcDNA-FLAG-ubiquitin was kindly provided by Dr. Paul Evans (The Babraham Institute). HEK293 cells were transfected by the calcium phosphate precipitation technique (15). HA-tagged Bim was immunoprecipitated from cell lysates using either mouse anti-HA antibodies conjugated to protein G-Sepharose beads or rabbit anti-HA antibodies conjugated to protein A-Sepharose.
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RESULTS |
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Using a real-time RT-PCR protocol we observed that the PI3K inhibitor LY294002 caused a striking 25-fold induction of Bim RNA levels, compared with a -actin control, when added to cells in 10% FBS (Fig. 1A). This was accompanied by a substantial increase in expression of BimEL protein (Fig. 1B). Surprisingly, although serum starvation caused a much smaller (5-fold) increase in Bim mRNA (Fig. 1A), it actually caused a greater increase in BimEL protein expression compared with that seen following addition of LY294002 (Fig. 1B). Analysis of PKB phosphorylation (Fig. 1B) confirmed that serum withdrawal and LY294002 were equally effective in reducing the activity of the PI3K/PKB pathway. This disparity indicated that the increase in BimEL expression following serum withdrawal could not be accounted for simply by increases in Bim mRNA following loss of PI3K activity and the resultant dephosphorylation of PKB. Because BimEL was by far the major form of Bim expressed under these conditions, with only low levels of BimL seen, further analysis focused on the regulation of BimEL.
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Activation of the ERK1/2 Pathway Is Necessary and Sufficient to Promote Phosphorylation of BimELWe (11) and others (21, 28) have previously noted that in viable cells the BimEL protein resolves as a series of diffuse bands on SDS-PAGE (Fig. 2A), consistent with it being a phosphoprotein, although the role of this phosphorylation has not previously been resolved. Indeed, upon serum withdrawal, the expression of Bim increased, and the BimEL protein resolved as a monomeric form (Figs. 1B and 2B). This led us to postulate that phosphorylation might play a role in regulating BimEL expression, perhaps by altering its stability. The withdrawal of serum causes the dephosphorylation and inactivation of ERK1/2 as well as PKB (11). To investigate the possible involvement of MAPKs or SAPKs in BimEL phosphorylation, we used clonal CCl39 cell lines expressing different conditional kinases that activate these signaling pathways (11, 12).
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CM3 cells express MEKK3:ER*, which, when activated by treatment with 4-HT, stimulates the ERK, JNK, and p38 pathways (12). In CM3 cells maintained in 10% FBS, the retarded mobility of BimEL on SDS-PAGE was entirely due to phosphorylation, because it resolved as a monomeric form with enhanced mobility when the lysates were treated with calf intestinal phosphatase. Activation of
MEKK3:ER* by treatment of cells with 4-HT caused further phosphorylation of BimEL, but again this was reduced to a single form by calf intestinal phosphatase treatment (Fig. 2A, CIP).
To define which MAPK or SAPK pathway was promoting BimEL phosphorylation, CM3 cells were serum-starved and then restimulated with 4-HT in the presence or absence of U0126 to prevent activation of ERK1/2 and ERK5 (22) as well as LY294002. Serum starvation caused an increase in BimEL protein expression, and under these conditions the hypophosphorylated form predominated. Activation of MEKK3:ER* caused phosphorylation of BimEL, and this was completely inhibited by U0126 but not LY294002 (Fig. 2B). The efficacy of these drugs was confirmed by immunoblotting for phospho-ERK1/2 in the case of U0126 and phospho-PKB for LY294002. This suggested that although
MEKK3:ER* can activate ERK1/2, JNK and p38, the ERK1/2 or ERK5 pathways were required for phosphorylation of BimEL.
To differentiate between the ERK1/2 and ERK5 pathways, we used CR111 cells (11), a clone of CCl39 cells expressing the conditional kinase Raf-1:ER* (23), which selectively activates the ERK1/2 pathway. Serum withdrawal again promoted the expression and dephosphorylation of BimEL. Subsequent activation of
Raf-1:ER* stimulated the phosphorylation of BimEL, and this was abolished by U0126 (Fig. 2C). These results indicate that selective activation of the ERK1/2 pathway is sufficient to induce substantial phosphorylation of BimEL.
Serum Stimulation Increases the Turnover of BimEL, and This Requires the ERK1/2 PathwayStimulus-dependent phosphorylation can serve to "flag" proteins for destruction (24), and so we examined the turnover of BimEL. CCl39 cells were serum-starved to induce the expression of the hypophosphorylated form of BimEL. These cells were then "chased" with emetine for 4 or 8 h, to prevent new protein synthesis, in the presence or absence of 10% FBS. When cell lysates were immunoblotted for Bim, it was apparent that BimEL protein levels decayed relatively slowly in serum-free medium with a half-life (t1/2) in excess of 8 h. Serum stimulation accelerated the decay of BimEL, with a t1/2 of 3 h, and this was associated with the phosphorylation of the protein. If cells were treated with PD184352, which inhibits the ERK1/2 pathway but not the ERK5 pathway (13), the FBS-stimulated phosphorylation of BimEL was abolished and FBS no longer increased the turnover of BimEL (t1/2 > 8 h). As a control, the turnover of the BH3-only protein, Bad, was unaffected by FBS or PD184352 (Fig. 3A).
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In common with the ERK1/2 pathway, the PI3K/PKB pathway is also inactivated upon withdrawal of serum and strongly reactivated when quiescent cells are stimulated with FBS. We therefore examined the effect of inhibiting the PI3K pathway on FBS-stimulated BimEL turnover. The PI3K inhibitor, LY294002, prevented PKB phosphorylation in response to serum stimulation but had no effect on ERK1/2 phosphorylation (Fig. 3B). Under these conditions LY294002 had no effect on FBS-stimulated turnover of BimEL, indicating that the PI3K/PKB plays no role in the serum-stimulated degradation of BimEL.
Selective Activation of the ERK1/2 Pathway Is Sufficient to Stimulate the Turnover of BimELTo determine whether activation of the ERK1/2 pathway alone was sufficient to promote turnover of BimEL, we performed emetine chase experiments in CR111 cells expressing Raf-1:ER*. In serum-starved CR111 cells, BimEL turnover was again slow (t1/2 > 8 h). Activation of
Raf-1:ER* resulted in activation of ERK1/2 (but not PKB (11)), causing a striking phosphorylation of BimEL (Fig. 4). This selective activation of the ERK1/2 pathway was sufficient to stimulate the turnover of BimEL and decrease the half-life of the protein to around 3 h, but again it had no effect on the levels of Bad (Fig. 4). Taken together the results shown in Figs. 3 and 4 indicate that activation of the ERK pathway is necessary and sufficient to stimulate the turnover of pre-existing BimEL protein.
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ERK1/2-dependent Degradation of BimEL Proceeds via the Proteasome PathwayThe regulated degradation of proteins proceeds, in most cases, via the proteasome pathway. Proteins marked for destruction by the covalent attachment of ubiquitin moieties to lysine residues are rapidly degraded by the 26 S proteasome (24). To determine whether serum-stimulated degradation of BimEL was proceeding via a proteasome-dependent pathway, we repeated the emetine chase experiments in the presence of the cell-permeant proteasome inhibitor, MG132. In these experiments we again observed that FBS stimulation caused the phosphorylation and degradation of BimEL (Fig. 5A). In contrast, MG132 completely blocked the FBS-stimulated degradation of BimEL without blocking phosphorylation, indicating that MG132 did not simply prevent activation of ERK1/2 (Fig. 5A).
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As a specificity control, CCl39 cells were serum-starved and restimulated with FBS and emetine in the absence or presence of various protease inhibitors. Neither the lysosomal inhibitor chloroquine nor the caspase inhibitor zVAD.fmk had any effect on the serum-stimulated degradation of BimEL. In contrast, both proteasome inhibitors, MG132 and lactacystin, blocked the turnover of BimEL without blocking its phosphorylation (Fig. 5B). We also observed that the proteasome inhibitor LLnL (N-acetyl-Leu-Leu-norleucinal) inhibited turnover of BimEL.3 These results suggest that serum-stimulated, ERK-dependent BimEL degradation proceeds via the proteasome.
As an independent confirmation of these results, we assessed the accumulation of BimEL protein in the ts20 CHO cell line, which harbors a temperature-sensitive mutation in the E1 component of the ubiquitin-conjugating system (14) and thus fails to support ubiquitination when switched from the permissive temperature (32 °C) to the restrictive temperature (39 °C). First we noted that when ts20 CHO cells were serum-starved overnight at 32 or 39 °C, the shift to the restrictive temperature was sufficient to cause an increase in the level of BimEL (Fig. 5C, lane 1 versus 4). In addition, when these cells were subjected to an emetine chase for 8 h, FBS promoted the phosphorylation and degradation of BimEL at 32 °C, but the phosphorylated BimEL protein was not degraded in response to FBS stimulation at 39 °C (Fig. 5C, lane 3 versus 6). As controls we noted that the expression of Bad was unaffected by FBS, emetine, or temperature shift and that temperature shift did not impair activation of ERK1/2 by FBS.
To see whether we could detect ubiquitin-conjugated Bim, we expressed HA-tagged BimEL in HEK293 cells and treated these cells with PD184352 to inhibit the ERK1/2 pathway or MG132 to block the proteasome. When these samples were subject to immunoprecipitation with anti-HA antibodies followed by Western blotting with Bim antibodies, we observed the expression of HA-BimEL and the smaller HA-BimL and HA-BimS due to splicing (Fig. 6A, lane 4); HA-ERK5 served as a negative control (Fig. 6A, lane 3). In untreated cells a faint series of bands formed a smear or ladder above HA-Bim (Fig. 6A, lane 4). Treatment with PD184352 caused dephosphorylation of BimEL and caused a modest reduction in the appearance of this ladder (Fig. 6A, lane 5), whereas MG132 did not affect the phosphorylation but enhanced the accumulation of these high molecular weight forms of Bim (Fig. 6A, lane 6). This effect of MG132 was in turn partly reduced by PD184352 (Fig. 6A, lane 7 versus 6). Co-expression of FLAG-ubiquitin (FLAG-Ub) also caused a slight further enhancement of these high molecular weight forms of HA-Bim (Fig. 6A, lane 2 versus 6), and this was also substantially reduced by PD184352 (Fig. 6A, lane 1 versus 2).
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Finally, these same samples were subjected to immunoprecipitation with anti-HA antibodies and then blotted with anti-FLAG antibodies to see whether we could demonstrate the attachment of FLAG-Ub to HA-Bim. As a control, poly-Ub conjugates were not detected in cells that were not transfected with FLAG-Ub (Fig. 6B, lanes 37). When FLAG-Ub and HA-BimEL were co-expressed in the presence of the proteasome inhibitor MG132, we were able to clearly detect poly-Ub conjugates associated with Bim, resolving as a smear up the gel. These were not seen when HA-BimEL was expressed alone in the presence of MG132 (Fig. 6B, lane 2 versus 6). The appearance of this smear of poly-Ub-conjugated Bim was partially reduced by treatment of cells with PD184352 (Fig. 6B, lane 1 versus 2), which also caused the dephosphorylation of BimEL (Fig. 6A, lane 1 versus 2). These results confirm in a heterologous system that transiently over-expressed BimEL is ubiquitinated; this is enhanced by over-expression of FLAG-Ub (allowing detection of FLAG-Ub/Bim conjugates) and is dependent, in large part, on the ERK1/2 pathway. Taken together the results shown in Figs. 3, 4, 5, 6 indicate that BimEL is degraded by the ubiquitin proteasome system in response to activation of the ERK1/2 pathway.
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DISCUSSION |
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Bim has previously been shown to be regulated by two discrete mechanisms. First, BimL and BimEL interact with 8-kDa dynein light chain 1 (27), providing a mechanism to sequester Bim at microtubules away from the mitochondria. This spatial segregation of Bim may be regulated in response to some stresses, although it's mechanism is unclear. Second, the de novo expression of Bim is a major mechanism of regulation. Bim mRNA and Bim protein are expressed at very low levels in most viable cells but are rapidly and substantially up-regulated following withdrawal of survival factors from lymphocytes (8, 21), neurons (9, 10), and fibroblasts (11). In addition, previous studies have noted that BimEL is a phosphoprotein (11, 21, 28), although the role of this phosphorylation and the signaling pathway responsible were not resolved. Here we have shown for the first time that the ERK1/2 pathway is the major pathway promoting BimEL phosphorylation and that activation of this pathway targets BimEL for degradation via the proteasome.
Our analysis of Bim phosphorylation was facilitated by the use of conditional MAPK kinase kinases, which allow rapid and selective activation of defined signaling pathways (12, 23). MEKK3:ER*, which activates the ERK, JNK, and p38 pathways (12), promoted phosphorylation of BimEL implicating the MAPK and/or SAPK pathways. The ability of U0126 to block this
MEKK3:ER*-induced phosphorylation further focused our attention on the ERK1/2 or ERK5 pathways, whereas the ability of PD184352 to block BimEL phosphorylation strongly suggested that the ERK1/2 pathway was responsible, because 5 µM PD184352 completely inhibits the ERK1/2 pathway without impacting on ERK5 (13). Finally, the ability of
Raf-1:ER* to selectively activate the ERK1/2 pathway (23) and induce BimEL phosphorylation confirmed that the ERK1/2 pathway was responsible.
A recent study in PC12 cells showed that NGF could promote BimEL phosphorylation and cause a slow decrease in BimEL protein levels over a period of several days (28). However, the authors did not examine whether this decline was due to changes in Bim mRNA or in protein stability, which is an important distinction because both the ERK and PI3K pathways can regulate Bim mRNA levels in some cells (11). Furthermore, the study relied solely on the use of 50 µM U0126, a dose that completely inhibits both the ERK1/2 and ERK5 pathways (22). Because NGF activates both ERK1/2 and ERK5 (22, 29) it was unclear which pathway was responsible for the slow decline in BimEL. In contrast, our results, using PD184352 to selectively inhibit and Raf-1:ER* to selectively activate the ERK1/2 pathway, clearly define the ERK1/2 pathway as being responsible for promoting BimEL phosphorylation. In addition, it is not clear that we are examining the same mechanism for down-regulation of BimEL as the study in PC12 cells (28). For example, the effects we observed on Bim turnover were rapid, with
Raf-1:ER* reducing Bim levels substantially within a few hours in the presence of emetine, whereas the down-regulation of BimEL described for NGF required several days (28). Although activation of ERK1/2 is necessary and sufficient for phosphorylation and degradation of BimEL, it is not yet clear that ERK1/2 are the kinases responsible for phosphorylating BimEL. Certainly there are other kinases downstream of ERK1/2, such as RSK1 (7), that have been implicated in cell survival, and future studies should be directed toward defining the identity of the kinase and the sites of phosphorylation.
Activation of the ERK1/2 pathway, either by FBS or Raf-1: ER*, was sufficient to greatly accelerate the turnover of BimEL from >8 h to
3 h, indicating that activation of this pathway targets BimEL for degradation. Three independent lines of evidence lead us to conclude that this ERK1/2-dependent degradation proceeds via the ubiquitin-proteasome pathway. First, cell-permeant, small molecule inhibitors of the proteasome prevented ERK-dependent degradation of BimEL. Second, serum-stimulated degradation of BimEL in ts20 CHO cells was blocked at the restrictive temperature at which the E1 ubiquitin-activating enzyme is inactive (14). Importantly, in neither case did these interventions prevent BimEL phosphorylation, suggesting that inhibition of the ubiquitin-conjugating system or the proteasome was not simply blocking ERK activation. In these experiments we analyzed the expression of Bad as an internal control, as it is another BH3-only protein, it has also been implicated in death following withdrawal of survival factors and is regulated in part by the ERK1/2 pathway (7). We found that the expression of Bad remained constant despite manipulation of the ERK, PI3K, or ubiquitin-proteasome pathways, which is consistent with other analysis indicating that Bad is a stably expressed protein that is relatively refractory to inhibition of de novo protein synthesis.4 Third, and finally, when BimEL was over-expressed in HEK293 cells, MG132 or co-expression of FLAG-Ub allowed us to detect Bim-FLAG-poly-Ub conjugates; this ubiquitination was reduced by PD184352. Taken as a whole these results provide very strong evidence to support a model in which activation of the ERK1/2 pathway promotes the phosphorylation of BimEL, which serves to flag BimEL for ubiquitination and destruction by the proteasome.
Our results suggest that the rapid expression of BimEL following withdrawal of serum or survival factors proceeds via at least two discrete mechanisms. The rapid inactivation of the ERK1/2 pathway will result in dephosphorylation and substantial stabilization of pre-existing and newly synthesized BimEL, which will be accompanied by increases in Bim mRNA because of activation of JNK (10) or loss of PI3K (8) or ERK1/2 activity (11), depending on the cell type. Thus, we provide a new insight into how the ERK1/2 survival pathway can "neutralize" BimEL and provide a novel mechanism by which the ERK1/2 pathway can contribute to cell survival following withdrawal of survival factors. This may be relevant to the survival of lymphocytes (8, 21) or neurons (9, 10) following withdrawal of the relevant pro-survival cytokines. In addition, because tumor cells are characterized, in part, by their ability to survive at reduced levels of growth factors (30), this finding may be relevant to tumor cells that harbor activated mutants of Ras or Raf.
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FOOTNOTES |
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Recipient of a Ph.D. studentship from the Medical Research Council, UK. Current address: Howard Hughes Medical Inst., University of Massachusetts Medical School, 373 Plantation St., Worcester, MA 01605.
A senior cancer research fellow of Cancer Research UK. To whom correspondence should be addressed. Tel.: 44-1223-496453; Fax: 44-1223-496043; E-mail: simon.cook{at}bbsrc.ac.uk.
1 The abbreviations and trivial names used are: BH3, Bcl-2 homology domain 3; CHO, Chinese hamster ovary; HEK, human embryonic kidney; ERK, extracellular signal-regulated kinase; FBS, fetal bovine serum; RT-PCR, reverse transcriptase-PCR; HA, hemagglutinin; JNK, c-Jun N-terminal kinase; MAPK, mitogen-activated protein kinase; MEK, MAPK/ERK kinase; MEKK, MEK kinase; NGF, nerve growth factor; PI3K, phosphatidylinositol 3'-kinase; PKB, protein kinase B; SAPK, stress-activated protein kinase; Ub, ubiquitin; zVAD.fmk, benzyl-oxycarbonyl-Val-Ala-DL-Asp-fluoromethylketone; 4-HT, 4-hydroxytamoxifen; LY294002, 2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one; MG132, carbobenzoxy-L-leucyl-L-leucyl-L-leucinal, (Z-LLL-CHO); U0126, 1,4-diamino-2,3-dicyano-1,4-bis(2-aminophenylthio)butadiene; PD184352, 2-(2-chloro-4-iodo-phenylamino)-N-cyclopropylmethoxy-3,4-difluorobenzamide.
2 Details are available from authors upon request.
3 R. Ley and S. Cook, unpublished observations.
4 C. J. Chalmers, K. Balmanno, K. Hadfield, R. Ley, and S. Cook, manuscript submitted.
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ACKNOWLEDGMENTS |
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REFERENCES |
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