Complex Formation of the Interferon (IFN) Consensus Sequence-binding Protein with IRF-1 Is Essential for Murine Macrophage IFN-gamma -induced iNOS Gene Expression*

Huabao XiongDagger §, Chen ZhuDagger , Hongxing LiDagger , Frank Chen, Lloyd MayerDagger , Keiko Ozato||, Jay C. UnkelessDagger , and Scott E. Plevy**

From the Dagger  Immunobiology Center and  Department of Pediatrics, Mount Sinai School of Medicine, New York, New York 10029, || Laboratory of Molecular Growth Regulation, NICHD, National Institutes of Health, Bethesda, Maryland 20892, and ** Division of Gastroenterology, Hepatology, and Nutrition, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261

Received for publication, September 18, 2002

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This study describes the role of the interferon (IFN) consensus sequence-binding protein (ICSBP or IRF-8) in iNOS gene expression by murine macrophages. An ICSBP binding site in the iNOS promoter region (-923 to -913) was identified using an electrophoretic mobility shift assay and chromatin co-immunoprecipitation. Overexpression of ICSBP greatly enhanced IFN-gamma -induced iNOS promoter activation in RAW264.7 cells, and IFN-gamma -induced iNOS promoter activation was abolished in ICSBP-/- macrophages. Furthermore, transduction of retrovirus-ICSBP in ICSBP-/- macrophages rescued IFN-gamma -induced iNOS gene expression. However, transduction of retrovirus-ICSBP in the absence of IFN-gamma activation did not induce iNOS expression in either RAW264.7 cells or ICSBP-/- macrophages. Interestingly, ICSBP alone transduced into ICSBP-/- macrophages did not bind to IFN-stimulated response element site (-923 to -913) of the iNOS promoter region, although following activation with IFN-gamma , a DNA·protein complex was formed that contains ICSBP and IRF-1. Co-transduction of ICSBP with IRF-1 clearly induces nitric oxide production. In addition, interleukin-4 inhibits IFN-gamma -induced iNOS gene expression by attenuating the physical interaction of ICSBP with IRF-1. Complex formation of ICSBP with IRF-1 is essential for iNOS expression, and interleukin-4 attenuates the physical interaction of ICSBP with IRF-1 resulting in the inhibition of INOS gene expression.

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Nitric oxide (NO)1 has been identified as an important signaling molecule involved in regulating a wide range of biological activities in the immune, vascular, and neural system (1-3). NO and its metabolites are central to the antimicrobial and tumoricidal activity of activated macrophages and are implicated in the pathogenesis of tissue damage associated with acute and chronic inflammation (4-9). Macrophages generate NO from L-arginine through the inducible isoform of nitric oxide synthase (iNOS), which is regulated transcriptionally. iNOS gene expression is induced by a variety of stimuli, including lipopolysaccharide (LPS), bacterial wall products, and cytokines. In particular, interferon-gamma (IFN-gamma ) is a potent inducer of iNOS gene expression (10, 11), although the molecular mechanism for the effect is still not understood fully.

The murine iNOS promoter region contains several binding sites for transcription factors implicated in iNOS regulation, including two NF-kappa B binding sites. The NF-kappa B site situated closer to the transcriptional start site is required for iNOS gene induction by LPS, because deleting the downstream site essentially abolishes iNOS transcription (12). Deletion of the upstream NF-kappa B site reduces but does not abolish iNOS transcription (12-14). The upstream portion of the iNOS promoter contains an enhancer region, with several transcription factor binding sites that mediate transcriptional responses to IFN-gamma . These sites include a gamma -interferon-activated site element and two IFN-stimulated response elements (ISRE) (15, 16). Deletion and mutational analysis have shown the importance of the promoter sequence from -1029 to -913 in the induction of iNOS by IFN-gamma (13). Site-directed mutagenesis and competition experiments have shown that the ISRE site between -923 and -913 is required for the full synergistic effects of IFN-gamma and LPS in the transcription of the iNOS gene (16).

The cytokine IFN-gamma plays an essential role in innate and adaptive immunity (17). IFN signaling, which involves a variety of trans- and cis-acting factors, is mediated through DNA motifs, designated ISRE and IFN-gamma -activated sequence, which are found in promoters of IFN-inducible genes. The interferon consensus sequence-binding protein (ICSBP or IRF-8) is a transcription factor belonging to the IFN regulatory factor (IRF) family, which also includes the IRF-1, IRF-2, IRF-3, interferon-stimulated gene factor 3gamma , and pip/IRF-4 proteins (18, 19). Unlike the other members of the IRF family, ICSBP expression is limited to activated macrophages, B cells, and T cells (20-23). Proteins of the IRF family, including ICSBP, bind to the ISRE (18). The tyrosine-phosphorylated form of ICSBP does not bind to DNA independently but requires complex formation with other members of the IRF family (IRF-1 and IRF-2) or with other transcriptional elements (24). Previous studies found that ICSBP represses transcriptional activity of ISRE promoters in various cell types. However, recent studies suggest that ICSBP can activate genes required for the development and function of macrophages (25, 26). ICSBP-/- mice were shown to be highly susceptible to infection with several pathogens including Listeria monocytogenes (27, 28) and are impaired in the production by macrophages of IFN-gamma -induced NO (29). However, the molecular mechanism for the regulation of NO by ICSBP is not clear.

In the present study we have analyzed iNOS gene expression in macrophages induced by IFN-gamma and have identified an ICSBP binding site in the iNOS promoter region. Transduction of ICSBP with a retroviral vector in ICSBP-/- macrophages rescues IFN-gamma -induced iNOS expression. Surprisingly, iNOS expression is not induced by transduction of ICSBP alone but requires co-transduction of ICSBP with IRF-1. This study provides new insights into the molecular mechanism of iNOS gene induction by IFN-gamma , which indicates the importance of an ICSBP·IRF-1 complex in the regulation of iNOS gene expression.

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Plasmid Constructs-- iNOS promoter fragments were inserted into the luciferase reporter vector pGL2B (Promega) as described previously (13). The IRF-1 expression plasmid was a gift from T. Taniguchi (University of Tokyo, Tokyo, Japan). All site-directed mutant plasmids were generated by two-step polymerase chain reaction using overlapping internal primers containing the mutant site (30).

Cell Lines and Reagents-- The RAW264.7 murine macrophage cell line (American Type Culture Collection) was maintained in RPMI 1640 supplemented with 10% fetal bovine serum and penicillin-streptomycin. ICSBP-/- macrophages (CL-2 cells) were established from bone marrow cells obtained from ICSBP-/- mice following coincubation with the murine J2 virus, harboring v-raf and v-myc genes (25). The CL-2 cells were maintained in the same media as above, supplemented with recombinant mouse M-CSF (6 ng/ml; R & D Systems, Minneapolis, MN) and recombinant mouse GM-CSF (6 ng/ml; Peprotech, Rocky Hill, NJ) (25). IFN-gamma and IL-4 were obtained from R & D Systems. LPS was purchased from Sigma. Antibodies against iNOS, ICSBP, IRF-1, and IRF-2 were from Santa Cruz Biotechnology.

Nitrite Determination-- Nitrite concentration, a measure of NO synthesis, was assayed by a standard Griess reaction adapted to microplates, as described previously (31). Nitrite accumulation was determined by using NaNO2 as standard, and the data were expressed as concentration of nitrite.

Transfection-- RAW267.4 cells were transiently transfected using Superfect (Qiagen). For each transfection, 2.5 µg of plasmid was mixed with 100 µl of RPMI 1640 (without serum and antibiotics) and 10 µl of Superfect reagent. The mixture was incubated at room temperature for 10 min, 600 µl of RPMI 1640 complete medium was added and immediately placed onto the cells in 6-well plates, and luciferase activity was measured 16-24 h later. For CL-2 cell transfection, reporter (10 µg) and expression vectors (30 µg) were transfected into 107 CL-2 cells by electroporation, and luciferase activity was measured 16 h later. When indicated, murine IFN-gamma (10 ng/ml) was added to the culture for 6-12 h before harvest. The cells were harvested with reporter lysis buffer (Promega), and 20 µl of extract was assayed for luciferase as described (30). Cells were co-transfected with a constitutively active cytomegalovirus promoter-beta -galactosidase reporter plasmid to normalize experiments for transfection efficiency.

Retroviral Transduction-- For retroviral transduction we used a derivative of the Moloney murine leukemia virus vector pMMP412 (32), courtesy of Dr. Adrain Ting (Mount Sinai School of Medicine). To prepare pseudotyped virus human 293 EbnaT cells were seeded at a density of 4 × 106 cells in a 10-cm dish. The next day, cells were transfected using calcium phosphate with a mixture of 2.5 µg of plasmid pMD.G encoding vesicular stomatitis virus G protein, 7.5 µg of plasmid pMD.OGP encoding gag-pol, and 10 µg of the retroviral expression construct. 48 h post-transfection, the viral supernatant was collected, centrifuged at 800 × g, and used to infect cells. RAW264.7 and CL-2 cells (5 × 106 cells) were resuspended in 12 ml of viral supernatant in the presence of polybrene (4 µg/ml), aliquoted into six-well plates, and spun at 800 × g in a microtiter rotor for 1 h at room temperature.

Electrophoretic Mobility Shift Assays (EMSA)-- RAW264.7 cell nuclear extracts were prepared as described previously (33). EMSA probes were prepared by annealing complementary single-stranded oligonucleotides with 5'GATC overhangs (Genosys Biotechnologies, Inc.) and were labeled by filling in with [alpha -32P]dGTP and [alpha -32P]dCTP using Klenow enzyme. Labeled probes were purified with Nuctrap purification columns (Roche Molecular Biochemicals). The sequence of the EMSA probe (-935 to -905) is 5'gatcACACTGTCTCA-ATATTTCACTTTCATAATGGAAAAT. Electrophoretic mobility shift assays were performed as described previously (34), using 105-cpm probe and 5 µg of nuclear extracts per reaction. DNA binding complexes were separated by 5% polyacrylamide-Tris/glycine-EDTA gel run at 4 °C for 4 h at 150 volts. Gels were dried and exposed to Eastman Kodak Co. X-AR 5 film at -80 °C in the presence of an intensifying screen.

Western Blotting-- Nuclear protein extracts and pre-stained molecular weight markers were denatured in Laemmli buffer (10% glycerol, 2% SDS, 0.1 M dithiothreitol, 65 mM Tris, 0.01 mg/ml bromphenol blue) at 90 °C, separated by SDS-PAGE, and transferred to a nitrocellulose membrane. After protein transfer, the membranes were blocked with 5% nonfat milk in TBST (Triton-containing Tris-buffered saline), incubated with anti-iNOS, anti-ICSBP, anti-IRF-1, or anti-IRF-2 antibodies (1:6000) for 1-2 h, washed with TBST, and stained with anti-rabbit or anti-mouse IgG conjugated to peroxidase (1:6000). Immunoreactivity was visualized by enhanced chemiluminescence reaction (enhanced chemiluminescence kit; Santa Cruz Biotechnology).

RT-PCR-- For RT-PCR assays, total RNA was extracted using TRIzol (Invitrogen). cDNA was prepared from 1-3 µg of RNA with Superscript II RT (Invitrogen) and random hexamer primers (Promega). The following primers were used for PCR amplification: IL-12 p40, 5'-TCGCAGCAAGATGTG-3' and 5'-GAGCAGCAGATGT-GAGTGGC; iNOS, 5'-CCCTTCCGAAGTTTCTGGCAGCAGC-3' and 5'-GGCTGTC-AGAGCCTCGTGGCTTTGG-3'. PCR was carried out by a standard protocol for appropriate cycles. An equal aliquot of cDNA was amplified with beta -actin primers. Aliquots of PCR reactions were resolved on a 1% agarose gel and visualized with UV light after staining with ethidium bromide.

Co-immunoprecipitation-- RAW264.7 cells were activated with IFN-gamma for 4 h. Then cells were washed with cold phosphate-buffered saline and lysed for 15 min on ice in 0.5 ml of lysis buffer (50 mM Tris, pH 8.0, 280 mM NaCl, 0.5% Nonidet P-40, 0.2 mM EDTA, 2 mM EGTA, 10% glycerol, and 1 mM dithiothreitol) containing protease inhibitors. Cell lysates were clarified by centrifugation at 4 °C for 15 min at 14,000 rpm. Cells lysates were incubated with 2 µg of IRF-1 antibody (Santa Cruz Biotechnology) in the presence of 20 µl of 50% (v/v) protein G-agarose overnight at 4 °C with gentle rocking. After three washings with lysis buffer, precipitated complexes were solubilized by boiling in SDS buffer, fractionated by 10% SDS-PAGE, and transferred to nitrocellulose. Western blotting was performed using ICSBP antibody.

Chromatin Immunoprecipitation Assay-- The experiments were performed using a chromatin immunoprecipitation (Chip) assay kit from Upstate Biotechnology according to the manufacturer's protocol. RAW264.7 cells were cultured in complete Dulbecco's modified Eagle's medium, activated with IFN-gamma for 4 h, fixed with 1% formaldehyde for 30 min at room temperature, and immunoprecipitated with anti-ICSBP antibody. The immunoprecipitated DNA was amplified by PCR with primers spanning from -1000 to -788 in the murine iNOS p40 promoter region.

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Characterization of ICSBP Binding Site in the iNOS Promoter Region-- Macrophages from ICSBP-/- mice are impaired in IFN-gamma -induced NO production (29), which suggests that ICSBP is involved directly in the regulation of iNOS gene expression. Because ICSBP is a transcription factor, we hypothesize that the murine iNOS promoter region may have an ICSBP site to which ICSBP can bind, resulting in the IFN-gamma -induced activation of the iNOS promoter. The mouse iNOS promoter has an enhancer and basal promoter, within which a number of response elements have been localized. Those known to be active include NF-kappa B sites located both in the enhancer and basal promoter and two ISRE. The distal ISRE element (-923 to -913) is a strong activator, whereas the proximal one has no significant effect on iNOS promoter activation (16, 35). In the present study, the ISRE site between -923 and -913 was selected for the analysis, because this site is important for full induction of iNOS gene expression by IFN-gamma . This site was also reported previously (16) as a binding site for IRF-1. RAW264.7 cells were activated with IFN-gamma , LPS, or IFN-gamma plus LPS for 4 h, and nuclear proteins were extracted for EMSA, which was performed by using probe spanning -935 to -905 of the iNOS promoter region containing -923 to -913 of the ISRE site. A protein·oligonucleotide complex was formed that is inducible by IFN-gamma and unaffected by LPS (Fig. 1A). When we used probe (-935 to -905) with mutations of ISRE site (TTTCACTTTC to GCCGTAGGCA), there was no DNA·protein complex formation (data not shown). Furthermore, ICSBP antibody blocked the formation of DNA·protein complex (Fig. 1B), which suggests that ICSBP can bind to this ISRE site. To confirm this result, we performed chromatin co-immunoprecipitation experiments. PCR analysis showed that ICSBP antibody precipitated the iNOS promoter region (-2000 to -788) from RAW264.7 cells activated with IFN-gamma for 4 h. (Fig. 1C). Western blotting experiments revealed that IFN-gamma induced ICSBP protein expression in RAW264.7 cells (Fig. 1D). These results strongly suggest that the ISRE site (-923 to -913) of the iNOS promoter region is a binding site for ICSBP.


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Fig. 1.   ICSBP binding to the ISRE site (-923 to -913) of the iNOS promoter region. A, IFN-gamma induces DNA·protein complex formation. RAW264.7 cells were activated with IFN-gamma (10 ng/ml), LPS (5 µg/ml), or IFN-gamma /LPS for 4 h, and nuclear protein was extracted for EMSA. 5 µg of nuclear protein were added to the 32P-labeled probe (-935 to -905 of the iNOS promoter). Extract and probe were incubated with 0.5 µg of poly(dI-dC) at room temperature for 30 min. B, ICSBP antibody (Ab) prevents DNA·protein complex formation. RAW264.7 cells were activated with IFN-gamma for 4 h, and nuclear protein was extracted for EMSA. 5 µg of nuclear protein were incubated with 2 µg of ICSBP antibody, and 32P-labeled probe (-935 to -905 of iNOS promoter) was added. C, chromatin co-immunoprecipitation (IP) assays. RAW264.7 cells were activated with IFN-gamma for 4 h. Formaldehyde was added to 1% final concentration for 30 min at room temperature. Cells were harvested, and the chromatin was sheared by sonication and purified for immunoprecipitation with an antibody against ICSBP. After reversal of cross-linking, DNA was amplified by PCR with primers spanning the iNOS promoter (-1000 to -788). D, IFN-gamma -induced ICSBP protein expression. RAW cells were activated with IFN-gamma , LPS, or IFN-gamma /LPS for 4 h, and nuclear protein was extracted for Western blotting. 20 µg of nuclear protein was subject to 10% SDS-PAGE, transferred to nitrocellulose membrane, and blotted with an antibody against ICSBP.

Overexpression of ICSBP Increases IFN-gamma -induced iNOS Promoter Activity-- The above data indicate that ICSBP can bind to the ISRE site (-923 to -913) in the iNOS promoter region. The effect of overexpressing ICSBP on iNOS promoter activity was analyzed next. RAW264.7 cells were co-transfected with an iNOS promoter luciferase reporter construct and an ICSBP expression plasmid for 12 h and activated with IFN-gamma for 8 h prior to determination of luciferase activity. Co-transfection of ICSBP strongly enhanced IFN-induced iNOS promoter activity (Fig. 2A). Showing the importance of the ISRE site, IFN-gamma -induced activity from an iNOS promoter with a mutated ISRE site (CTTTC into TGCCT) was inhibited 90%, and co-transfection with the ICSBP expression plasmid had no effect on the IFN-gamma -induced activity (Fig. 2, A and B). The synergistic induction of the mutated iNOS promoter activation by IFN-gamma and LPS was reduced by 40%, but the mutation has no effect on LPS-induced iNOS promoter activity (Fig. 2B). The results indicate that ICSBP is important for IFN-gamma -induced iNOS promoter activation.


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Fig. 2.   ICSBP is important for IFN-gamma -induced iNOS promoter activation. An ICSBP expression plasmid was co-transfected with an iNOS promoter luciferase construct or an iNOS promoter with a mutated ISRE site (-923 to -913) into RAW264.7 cells and incubated for 18 to 24 h. The transfected cells were activated with IFN-gamma (10 ng/ml), LPS (5 µg/ml), or IFN-gamma /LPS for 12 h. Extracts from activated cells were analyzed by luciferase assay. Results (normalized for beta -galactosidase activity) are expressed as the luciferase activity (A) or percentage of wild-type iNOS promoter activity (B). Each result represents the mean of data from four to five experiments.

iNOS Promoter Activity Is Impaired in ICSBP-/- Macrophages-- To analyze further the importance of ICSBP in the activation of the iNOS promoter, we tested ICSBP-/- macrophages for IFN-gamma induced NO production and iNOS mRNA and protein expression. Both RAW264.7 cells and CL-2 cells were activated with IFN-gamma (10 ng/ml) for 12 h (protein) or 72 h (nitrite). CL-2 cells had a reduced iNOS protein expression and nitrite accumulation induced by IFN-gamma compared with RAW264.7 cells (Fig. 3, A and B). To determine iNOS promoter activation in CL-2 cells, RAW264.7 cells and CL-2 cells were transfected with iNOS promoter luciferase reporter construct. iNOS promoter activation induced by IFN-gamma was strongly impaired in CL-2 cells (Fig. 3C). However, co-transfection of ICSBP moderately rescued the iNOS promoter activation induced by IFN-gamma in CL-2 cells. All these results suggest that ICSBP is important for iNOS expression induced by IFN-gamma .


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Fig. 3.   iNOS promoter activation is impaired in ICSBP-/- macrophages. A, nitrite accumulation was strongly reduced in ICSBP-/- macrophages. Both RAW264.7 cells and ICSBP-/- macrophages were activated with IFN-gamma (10 ng/ml) for 48 h. Supernatants were then collected, and nitrite accumulation was determined using Griess reagent. B, iNOS protein expression was impaired in ICSBP-/- macrophages. Both RAW264.7 cells and ICSBP-/- macrophages were activated with IFN-gamma for 12 h, and cellular protein was extracted for Western blotting. 20 µg of cellular protein was subjected to 10% SDS-PAGE, transferred to nitrocellulose membrane, and blotted with iNOS antibody. C, IFN-gamma -induced iNOS promoter activity was strongly impaired in ICSBP-/- macrophages. Both RAW264.7 cells and ICSBP-/- macrophages were co-transfected with an iNOS promoter luciferase plasmid and an ICSBP expression plasmid. The cells were incubated for 18 to 24 h and activated with IFN-gamma for 12 h. Extracts from the activated cells were analyzed by luciferase activity. Results (normalized for beta -galactosidase activity) were expressed as luciferase activity. Each result represents the mean of data from four to five experiments.

Transduction of ICSBP in ICSBP-/- Macrophages Rescues IFN-gamma -induced iNOS Gene Expression-- The data above showed that CL-2 cells were deficient in NO production induced by IFN-gamma . To demonstrate the importance of ICSBP for iNOS gene expression, we transduced ICSBP into ICSBP-/- macrophages to rescue iNOS gene expression. The transduction efficiency judged by GFP fluorescence was around 70-80% by fluorescence-activated cell sorter (data not shown). Cells were activated with IFN-gamma and analyzed for iNOS mRNA and protein and nitrite accumulation. After transduction of ICSBP, IFN-gamma -induced iNOS expression and nitrite accumulation were rescued (Fig. 4, A-C). In addition, the synthesis of IL-12 expression, another IFN-gamma -regulated gene, was rescued, as well (Fig. 4D). Unexpectedly, transduction of ICSBP alone did not rescue iNOS expression, although ICSBP protein was clearly expressed (Fig. 4, A-C). These results suggest that ICSBP alone is not sufficient for iNOS gene expression.


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Fig. 4.   Transduction of ICSBP into ICSBP-/- macrophages rescues IFN-gamma -induced iNOS expression. CL-2 cells were transduced with retrovirus-ICSBP or retrovirus-GFP as control. A, the transduced cells were activated with IFN-gamma for 48 h. Supernatants were then collected, and nitrite accumulation was determined using Griess reagent. B, the transduced cells were activated with IFN-gamma for 8 h. Total cellular RNA was then extracted, and RT-PCR was performed for the detection of iNOS mRNA expression. C, the transduced cells were activated with IFN-gamma for 12 h, and Western blotting was performed for the detection of iNOS protein expression. D, the transduced cells were activated with IFN-gamma /LPS for 8 h, total cellular RNA was extracted, and RT-PCR was performed for the detection of IL-12 mRNA expression.

ICSBP·IRF-1 Complex Formation Is Required for iNOS Gene Expression-- To explain the requirement for both IFN-gamma and ICSBP to rescue iNOS transcription and NO production in CL-2 cells, we suggest that either another transcription factor may be needed or that IFN-gamma induces post-translational modification of ICSBP. We first examined whether ICSBP can bind to the ISRE site of the iNOS promoter. After transduction with ICSBP or GFP as a control, CL-2 cells were incubated with or without IFN-gamma for 4 h, nuclear protein was extracted, and EMSA was performed with a probe (-935 to -905) containing the iNOS promoter ISRE site (-923 to -913). Interestingly, EMSA experiments indicated that transduction with ICSBP alone did not result in DNA·protein complex formation, which was, however, seen after activation with IFN-gamma (Fig. 5A). Furthermore, cycloheximide prevented the formation of this complex (Fig. 5B), suggesting that synthesis of another IFN-induced transcription factor is needed for ICSBP to bind to the ISRE site of iNOS promoter.


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Fig. 5.   IFN-gamma induces DNA·protein complex formation in ICSBP-/- macrophages transduced with ICSBP. CL-2 cells were transduced with ICSBP or GFP as a control, and the cells were activated with IFN-gamma (10 ng/ml) for 4 h. The nuclear proteins were extracted, and electrophoretic mobility shift assay was performed using a probe between -935 and -905 of the iNOS promoter. 32P-Labeled probes were incubated with 0.5 µg of poly(dI-dC) and 5 µg of nuclear extracts (A). The transduced cells were pretreated with cycloheximide (10 µg/ml) for 1 h and activated with IFN-gamma (10 ng/ml) for 4 h. The nuclear proteins were then extracted, and electrophoretic mobility shift assay was performed using probe between -935 and -905 of the iNOS promoter. 32P-Labeled probes were incubated with 0.5 µg of poly(dI-dC) and 5 µg of nuclear extracts (B).

ICSBP is known to form complexes with IRF-1 or IRF-2. When RAW264.7 cells were activated with IFN-gamma for 4 h, Western blotting results indicated that IFN-gamma strongly induces IRF-1 protein expression (Fig. 6A). However, because IFN-gamma has no effect on IRF-2 protein expression (Fig. 6A), IRF-1 is therefore the more likely candidate as the ICSBP partner. The ISRE site in the iNOS promoter region (-923 to -913) was identified as an IRF-1 binding site in previous studies (16), and IRF-1 -/- mice are defective in NO production. In addition, IRF-1 binds to the same ISRE site that we identified as an ICSBP site. To confirm the binding of IRF-1 to the ISRE site, we transduced ICSBP-/- macrophages with ICSBP and activated the cells with IFN-gamma for 4 h. Nuclear protein was extracted, and EMSA was performed using a probe (-935 to -905) bracketing the ISRE site (-923 to -913). Both ICSBP and IRF-1 antibodies prevented the DNA·protein complex formation (Fig. 6B), showing the presence of both proteins in the DNA·protein complex. In addition, co-immunoprecipitation experiments demonstrated that a complex formed between ICSBP and IRF-1 in nuclear proteins from IFN-gamma -activated RAW264.7 cells (Fig. 6C). When RAW264.7 cells were co-transfected with an iNOS luciferase reporter and both ICSBP and IRF-1, strong luciferase activity was observed, whereas transfection with ICSBP or IRF-1 alone only weakly induced iNOS promoter activation (Fig. 6D). Co-transduction with ICSBP and IRF-1 induced iNOS expression and nitrite accumulation, whereas transduction of with either ICSBP or IRF-1 alone was not sufficient to induce iNOS expression (Fig. 6F). These results suggest that the complex formation of ICSBP with IRF-1 is essential for iNOS gene expression.


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Fig. 6.   The complex formation of ICSBP with IRF-1 is important for iNOS expression. A, RAW264.7 cells were activated with IFN-gamma for 4 h, and nuclear protein was extracted for Western blotting. 20 µg of nuclear protein was subjected to 10% SDS-PAGE, transferred to nitrocellulose, and blotted with IRF-1 or IRF-2 antibodies. B, CL-2 cells were transduced with ICSBP or GFP as a control, and the cells were activated with IFN-gamma (10 ng/ml) for 4 h. The nuclear proteins were then extracted, and electrophoretic mobility shift assay was performed using a probe between -935 and -905 of the iNOS promoter. 5 µg of nuclear extracts was incubated with either 2 µg of ICSBP or 2 µg of IRF-1 antibody for 40 min before adding 32P-labeled probe (-935 to -905). C, RAW264.7 cells were activated with IFN-gamma for 4 h, and nuclear protein was extracted. 500 µg of nuclear protein was immunoprecipitated with 2 µg of IRF-1 antibody. The immunoprecipitated protein was subjected to 10% SDS-PAGE, transferred to nitrocellulose membrane, and blotted with IRF-1 antibody. D, the iNOS promoter luciferase reporter was co-transfected with ICSBP and IRF-1 into RAW264.7 cells. The cells were incubated for 24 h, and the cellular extracts were analyzed for luciferase activity. E, RAW264.7 cells were co-transduced with ICSBP and IRF-1, and the cells were incubated for 48 h. Supernatants were collected for the determination of nitrite accumulation using the Griess reagent, and cellular protein was extracted for Western blotting. 20 µg of protein were subjected to 10% SDS-PAGE, transferred to nitrocellulose membrane, and blotted with an antibody against iNOS.

The ICSBP-IRF-1 Interaction Is Important for the Inhibition of iNOS Expression by IL-4-- IL-4 is a Th2 cytokine that can counteract the effects of IFN-gamma and thus serves as an anti-inflammatory molecule. IL-4 can suppress iNOS expression in both primary macrophages and RAW264.7 cells treated with IFN-gamma . In the present study, we demonstrated that complex formation of ICSBP with IRF-1 is essential for iNOS induction by IFN-gamma . To test whether the ICSBP·IRF-1 complex is a target of IL-4, we first analyzed the effect of IL-4 on iNOS gene expression. RAW264.7 cells pretreated with IL-4 (10 ng/ml) for 1 h were activated with IFN-gamma , after which iNOS mRNA and protein expression and nitrite accumulation were determined. IL-4 clearly inhibited iNOS expression and nitrite accumulation induced by IFN-gamma (Fig. 7, A-C). We next analyzed the effect of IL-4 on IFN-gamma -induced DNA·protein complex formation by EMSA with probe covering iNOS promoter ISRE site (-923 to -913). The results showed that IL-4 prevented the DNA·protein complex formation between ICSBP and IRF-1 (Fig. 7D). Co-immunoprecipitation experiments indicated that the physical binding of ICSBP with IRF-1 was attenuated by the pretreatment with IL-4 (Fig. 7E). These results suggest that the interaction of ICSBP with IRF-1 may be the target for the IL-4-mediated inhibition of IFN-gamma -induced iNOS expression.


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Fig. 7.   IL-4 attenuates the physical interaction of ICSBP with IRF-1. A, RAW264.7 cells were pretreated with IL-4 (10 ng/ml) for 1 h and activated with IFN-gamma for 48 h. Supernatants were then collected, and nitrite accumulation was determined using the Griess reagent. B, RAW264.7 cells were pretreated with IL-4 (10 ng/ml) for 1 h and activated with IFN-gamma (10 ng/ml) for 6 h. Total cellular RNA was then extracted, and RT-PCR was performed for the detection of iNOS mRNA expression. C, RAW264.7 cells were pretreated with IL-4 (10 ng/ml) for 1 h and activated with IFN-gamma for 12 h. Total cellular protein was then extracted for Western blotting. 20 µg of protein were subjected to 10% SDS-PAGE, transferred to a nitrocellulose membrane, and blotted with an antibody against iNOS. D, RAW264.7 cells were pretreated with IL-4 (10 ng/ml) and activated with IFN-gamma for 4 h. The nuclear proteins were then extracted, and electrophoretic mobility shift assay was performed using a probe between -935 and -905 of the iNOS promoter. 32P-Labeled probes were incubated with 0.5 µg of poly(dI-dC) and 5 µg of nuclear extracts. E, RAW264.7 cells were pretreated with IL-4 (10 ng/ml) for 1 h and activated with IFN-gamma . Nuclear extracts were prepared and immunoprecipitated with 2 µg of antibody to IRF-1 and 20 µl of protein G-agarose beads. Beads were washed extensively and boiled with 1× SDS-PAGE sample buffer, subjected to 10% SDS-PAGE, and immunoblotted with an antibody against ICSBP. For controls, 20 µg of nuclear protein was subjected to 10% SDS-PAGE and immunoblotted either with antibodies against ICSBP or IRF-1.


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ABSTRACT
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DISCUSSION
REFERENCES

This study describes the role of ICSBP in the regulation of murine macrophage iNOS gene expression. An ICSBP binding site in the iNOS promoter region (-923 to -913) was identified, and we show that the complex formed by ICSBP and IRF-1 is essential for IFN-gamma -induced iNOS gene expression. IL-4, a Th2 cytokine that inhibits IFN-gamma -induced iNOS gene expression, attenuates the physical interaction of ICSBP with IRF-1. Thus, complex formation of ICSBP with IRF-1 is a central element in iNOS gene expression and offers a novel example of cooperation among transcription factors resulting in the regulation of target gene expression.

The transcriptional regulation of iNOS has been studied extensively and characterized by a promoter with numerous protein-DNA and protein-protein interactions. Although many potential cis-regulatory elements have been identified, six enhancer elements have been shown to be important in IFN-gamma and LPS induction of iNOS. In the upstream enhancer element known as region II, located between positions -1029 and -913, one IFN-stimulated response element and an IFN-gamma -activated sequence have been identified (15, 16, 35). For LPS transcriptional regulation of iNOS, two NF-kappa B sites, one located in the basal enhancer region I between positions -48 and -209 and another located in region II, are required (36). More recently, another cis-regulatory element, an Oct site, which binds the basal transcriptional element octomer, was found to be required for maximal iNOS transcription by LPS. NF-kappa B has also been shown to be required in the regulation of the human iNOS gene (37). Although it has become clear that many transcription factors are important for the activation of iNOS promoter, how these factors work together to regulate iNOS gene expression still remains to be elucidated.

IFN-gamma , a potent inducer of NO production, also has synergistic effects with other proinflammatory cytokines, such as IL-1 and tumor necrosis factor-alpha (38). IFN-gamma strongly activates IRF family members, including IRF-1 and ICSBP. Both IRF-1- and ICSBP-deficient mice are vulnerable to bacterial infections (16, 27, 28). These mice do not generate a Th1 immune response against intracellular pathogens, and macrophage production of IL-12 in response to LPS and IFN-gamma activation is seriously compromised (39, 40). Interestingly both IRF-1-/- and ICSBP-/- macrophages display selective impairment of IFN-gamma -induced NO production (16, 29). Kamijo et al. (16) reported that NO production induced by IFN-gamma and LPS was strongly impaired in IRF-1-/- mice, and they also identified the IRF-1 binding site in the ISRE site (-923 to -913) of the iNOS promoter region. Other reports suggest that IRF-1 is required, along with NF-kappa B, for the synergistic effect of IFN-gamma with tumor necrosis factor-alpha in the induction of iNOS expression (41). However, the mechanism responsible for the IRF-1 effect on iNOS gene expression is still not understood fully.

IRF-1-/- mice and ICSBP-/- mice both display clear impairment of IFN-gamma -induced NO production (29), which suggests that ICSBP is involved directly in iNOS gene regulation. Because ICSBP is an IFN-gamma -induced transcription factor, we hypothesized that there should be an ICSBP binding site in the iNOS promoter region, and we have now identified ICSBP binding site between -923 and -913, which is required for maximal effects of IFN-gamma induction of the iNOS gene (35). EMSA and chromatin co-immunoprecipitation experiments show that ICSBP binds to this typical ISRE site. Overexpression of ICSBP greatly enhanced IFN-gamma -induced iNOS promoter activation, whereas overexpression of ICSBP had no effect on the mutant iNOS promoter with a mutated ISRE site (-923 to -913) in the iNOS promoter. Furthermore, macrophages from ICSBP-/- mice are severely compromised in IFN-gamma -induced iNOS promoter activation and nitric oxide production. These results suggest that ICSBP is important for iNOS gene expression and that ISRE site at -923 to -913 is a binding site for ICSBP.

As we expected, when we transduce ICSBP-/- macrophages with ICSBP, IFN-gamma -induced iNOS expression was rescued. But, unexpectedly, transduction with ICSBP alone did not induce iNOS gene expression, although ICSBP was expressed. EMSA experiments indicate that without IFN-gamma activation, ICSBP did not bind to the ISRE site (-923 to -913) in the iNOS promoter. Furthermore, IFN-gamma -induced DNA·protein complex formation is sensitive to cycloheximide, suggesting that another transcription factor is needed to form the complex. EMSA experiments demonstrated that this complex also contains IRF-1. In addition, co-immunoprecipitation experiments indicated the presence of an ICSBP·IRF-1 complex in the nucleus of IFN-gamma -activated RAW264.7 cells. All these results suggest that a complex between ICSBP and IRF-1 is essential for the iNOS expression induced by IFN-gamma .

Transcription of critical cytokines and other important genes is often regulated by synergistic combination of transcription factors, which form a nuclear protein complex called an "enhanceosome" (42). For example, NF-kappa B alone or IRF-1 alone induces transcription of the IFN-beta gene at much lower levels than both transcription factors together. In the present study we found that ICSBP and IRF-1 synergize to activate the iNOS promoter. ICSBP was cloned from a cDNA expression library screened with a labeled ISRE DNA element from a major histocompatibility complex class I promoter. Specific interaction with different IFN type I-induced genes was demonstrated by Southern-Western analysis. The stimulatory effects of ICSBP on the transcriptional activity of both IRF-1 and IRF-2 suggest that different DNA-binding heterocomplexes were involved, which led to the identification of specific protein·protein complexes between these factors. In vitro translated IRF-1, IRF-2, and ICSBP were able to form strong interacting complexes that were also identified in nuclear extracts from various cell lines. In the present study, direct physical interaction of ICSBP with IRF-1 was found in nuclear extracts from RAW264.7 cells activated with IFN-gamma . This suggests that the effects of ICSBP and IRF-1 on the iNOS gene expression are based on the direct physical interaction of ICSBP with IRF-1.

ICSBP was regarded initially as a transcription repressor (21). Contursi et al. (29) also reported that ICSBP represses IFN-gamma -induced ISRE activity. However, it has been demonstrated recently that ICSBP can interact with PU.1, a hematopoietic cell-specific member of the Ets family (43), resulting in the activation of transcription. Accumulated evidence indicates that ICSBP and PU.1 activate transcription through Ets-IRF DNA elements and related elements in IFN-gamma -stimulated macrophages, as reported for IL-1beta and the respiratory oxidase gene gp91 phox (44-46). ICSBP and PU.1 may also have a role in enhancing expression of the toll-like receptor 4 and IL-18 through a similar element (47, 48). This activation seems to involve other factors, notably the co-activator/histone acetylase cAMP-response element-binding protein-binding protein/p300, with which PU.1 has been shown to interact (49). The present study demonstrated that ICSBP and IRF-1 have a synergistic effect on the activation of iNOS promoter, which agrees with the results reported for activation of the IL-12 promoter (25). These findings suggest ICSBP has a dual role in the regulation of transcription. On one hand, ICSBP represses ISRE promoter activity resulting in the inhibition of transcription, but ICSBP can also activate iNOS, IL-12, and IL-1beta promoter activities. Therefore, the exact molecular mechanism for the regulation of transcription by ICSBP still needs to be elucidated. Our future study will focus on analysis of the ISRE sites in different promoters to find differences in ISRE sequence or flanking sequence and correlate these differences with the regulation of transcription by ICSBP. We will also search for new partner that ICSBP recruits following macrophage IFN-gamma activation. We hope to address the mechanism responsible for the dual role of ICSBP in the regulation of transcription.

Regulation of inflammatory responses involves intercellular communication through a network of secreted cytokines. To avoid detrimental inflammatory and cytotoxic reactions of activated macrophages, the production of proinflammatory cytokines and chemokines, as well as of reactive oxygen and nitrogen intermediates, are tightly regulated (50, 51). This regulation is at least partially dependent on the balance between proinflammatory and anti-inflammatory cytokines. Although IL-4-mediated anti-inflammatory function has been found to include both transcriptional and translational events, the transcriptional regulation represents a major target (52, 53). In the present study, we found IL-4 inhibits iNOS gene expression in part by attenuating the interaction of ICSBP with IRF-1. However, we cannot exclude that other mechanisms may play a role in the inhibition of iNOS gene expression by IL-4.

Taken together, our results provide a novel insight on the molecular mechanism for the induction of iNOS gene expression by IFN-gamma . ICSBP, a member of IRF family, can form a complex with IRF-1 that is essential for iNOS gene expression. IL-4, an anti-inflammatory cytokine, inhibits iNOS gene expression by disrupting the interaction of ICSBP with IRF-1. These results may provide a framework for future anti-inflammatory therapy.

    ACKNOWLEDGEMENT

We are extremely grateful to Dr. Jianfei Yang for technical support.

    FOOTNOTES

* The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

§ Supported by Crohn's and Colitis Foundation of America Grant 02-0040IB. To whom correspondence should be addressed: Immunobiology Center, Box 1630, The Mount Sinai School of Medicine, 1 Gustave L. Levy Place, New York, NY 10029-6574. Tel.: 212-659-9413; Fax: 212-849-2525; E-mail: xionghbl@yahoo.com.

Published, JBC Papers in Press, November 11, 2002, DOI 10.1074/jbc.M209583200

    ABBREVIATIONS

The abbreviations used are: NO, nitric oxide; LPS, lipopolysaccharide; IFN, interferon; NF-kappa B, nuclear factor kappa B; ISRE, IFN-stimulated response element; ICSBP, IFN consensus sequence-binding protein; IL, interleukin; EMSA, electrophoretic mobility shift assay; RT, reverse transcriptase; GFP, green fluorescent protein.

    REFERENCES
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
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