From the Department of Applied Molecular Biosciences, Graduate
School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan and the Department of Pediatrics, Fujita Health
University School of Medicine, Toyoake 470-1101, Japan
Received for publication, November 14, 2000, and in revised form, December 28, 2000
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ABSTRACT |
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Cereal proteins are known to cause allergic
reactions such as Baker's asthma and severe atopic dermatitis to
certain populations. In rice allergy, proteins with molecular masses of
14-16, 26, 33, and 56 kDa have been demonstrated to be potentially
allergenic. In this study, to identify and characterize the 33-kDa
allergen, designated Glb33, this protein was first purified to
homogeneity, and its cDNA clone was isolated. When expressed in
Escherichia coli, the recombinant Glb33 was shown to be as
reactive as the native Glb33 with mouse IgG and patients' IgE
antibodies to Glb33. The Glb33 cDNA coded for a protein of 291 amino acids with two 120-amino acid residue repeats, and the amino acid
sequence showed similarity to glyoxalase I from various organisms,
including human, plant, yeast, and bacterium. As expected, both native
Glb33 purified from rice seeds and the recombinant protein had
glyoxalase I activity that catalyzes condensation of methylglyoxal and
glutathione into S-lactoylglutathione. However, Glb33 had a
higher sequence identity to the bacterial glyoxalase I rather than to
known plant and yeast enzymes. Both the Glb33 transcript and the
protein were detected not only in maturing seeds of rice but also in
its stem and leaf. Taken all together, the rice allergen, Glb33, was
identified to be a novel type of plant glyoxalase I that is expressed
in various plant tissues, including maturing seeds.
Ingestion and inhalation of cereals and flours are known to be a
cause of allergic disorders, such as asthma, eczema and dermatitis, and
gluten-sensitive enteropathy (1). Among these cereal allergies, asthma,
eczema, and dermatitis are thought to be caused mainly, or in part, by
the IgE1-mediated type I
allergic reaction against certain cereal proteins (1-3). Asthma caused
by cereal is frequently found in workers handling cereal flours in
European countries and considered to be an occupational disease known
as "Baker's asthma." Using the reactivity to IgE from the
asthmatic and other cereal-sensitive patients as a gauge, the potent
allergenic components in cereals was identified as the 15-20-kDa
proteins of the plant Rice is a cereal produced and consumed in large quantity in South and
East Asian countries. The association of rice seed proteins with
allergic reaction was first reported in Japan for patients with
histories of asthma induced by rice flour exposure and eczema exacerbated by rice ingestion (6). Several clinical studies on
rice-induced allergy have been reported for asthma (7) and severe
atopic dermatitis (8) in Japan. Rice seed proteins with molecular
masses of about 14-16, 26, 33, and 56 kDa were shown to be reactive
with IgE antibodies from patients with a suspected rice allergy (9). A
group of homologous proteins of about 14-16 kDa recognized by IgE from
the majority (90-95%) of the patients in rice seeds was isolated and
characterized to be A trial to produce hypoallergenic rice was done by suppressing the
allergenic genes in transgenic rice plants (14). The expression of
14-16-kDa allergens in maturing seeds was demonstrated to be markedly
reduced, without any biological side effect on the rice plants, to
10-20% of that of wild type by the introduction of specific antisense
genes into rice plants. However, to develop hypoallergenic rice for
therapeutic use, some other potent allergens should be decreased or
eliminated by conventional breeding and/or genetic engineering.
Toward the hypoallergenic rice production and for a better
understanding of IgE reactivity of rice seed proteins, it would be of
interest and importance to know the structure of the major allergenic
proteins and their expression as well as the real function of these
proteins in rice plants. The aim of the present study is isolation of
the protein and cDNA for the rice 33-kDa allergen and
characterization of its expression and function, to decipher any
biological roles of the rice 33-kDa allergen in rice plants. The
cDNA and the deduced amino acid sequences indicated that the rice
33-kDa allergen consisted of two repeated sequences, each of which
showed sequence similarity to bacterial glyoxalase I enzymes and to
plant enzymes, albeit with lower identity. In fact, the purified and
recombinant 33-kDa proteins revealed not only reactivity with
patients' IgE but also catalytic activity characteristic of glyoxalase
I. This is the first report on a novel type of a plant allergen
possessing glyoxalase I activity.
Isolation of the Rice Seed 33-kDa Protein (Glb33) with IgE
Reactivity--
Rice seed proteins were extracted from dehulled grains
of rice (Oryza sativa L. Japonica cv. Nipponbare)
and concentrated as described previously (11). Briefly, proteins were
extracted with 1 M NaCl by sonication and precipitated with
ammonium sulfate (70% saturation). A part of the protein precipitated
with ammonium sulfate was dialyzed against buffer A, (20 mM Tris-HCl, pH 8.6) and subjected to DEAE ion-exchange
chromatography (DE52, Whatman International Ltd., Maidstone, United
Kingdom). After being washed with buffer A, the column was subjected to
a linear gradient of NaCl, from 0 to 0.5 M in buffer A. Protein peak fractions with UV absorbance at 280 nm were individually
collected, and the reactivity to patients' IgE antibodies was
determined for each fraction as described below. The fractions with
reactivity to the IgE antibodies were dialyzed against buffer A and
subjected to HPLC (Jasco, Tokyo, Japan) equipped with an
ion-exchange column of DEAE-5PW (Tosoh, Tokyo, Japan), which had
been equilibrated with buffer A. Proteins were eluted with a linear
NaCl gradient from 0 to 0.25 M in buffer A.
cDNA Cloning and Sequencing--
To obtain amino acid
sequences for Glb33, its tryptic peptides were prepared as follows. The
HPLC-purified Glb33 was digested with
N-
For the cDNA cloning of Glb33 gene, degenerate sense
oligonucleotide mixtures,
5'-AT(A/T/C)GG(G/A/T/C)AC(G/A/T/C)GA(A/G)GA(C/T)GT(G/A/T/C)TA(C/T)AT-3', synthesized according to the determined amino acid sequences for Glb33
were end-labeled with 32P and used for the screening of a
random-primed cDNA library of Heterologous Expression of the Rice Glb33--
The Glb33
cDNA inserted in pUC118 was amplified by PCR using a sense primer,
5'-GCTCGAAGCCATGGCAAGCGGT-3' (nucleotide positions 23-45), and an
antisense primer, 5'-GAACTTGGGATATCTCTCATCT-3' (nucleotide positions
910-931), in which NcoI and EcoRV sites were
incorporated, respectively. The PCR product was first cloned into
pBluescriptKS(+), amplified, and then cloned again into pET-32a(+) (Novagen, Darmstadt, Germany) to construct a plasmid designated as
pET-33k, for Glb33 expression. The Glb33/thioredoxin fusion protein was
expressed in E. coli and purified by a stepwise elution with
varied imidazole concentrations in accordance with manufacturer's instruction (Novagen). The purified protein was dialyzed against the
cleavage buffer, 20 mM Tris-HCl, pH 7.4, 50 mM
NaCl, 2 mM CaCl2, and digested with
enterokinase (Novagen), 2 units for 50 µg of protein in 2 ml of the
buffer. After analysis by SDS-PAGE, the enterokinase digest was
subjected again to the column of His-bind resin to remove
released thioredoxin as well as undigested fusion protein. The
flow-through fraction containing recombinant Glb33 (rGlb33) was
dialyzed against phosphate-buffered saline (PBS) and stored at
Measurement of Reactivity to Patients' IgE Antibodies and Mouse
Antiserum by ELISA--
Reactivity of rGlb33 to mouse anti-Glb33
antibodies and human IgE antibodies was also measured by ELISA (16).
ELISA plates (Nunc-ImmunoTM plate, Nalgen Nunc
International, Roskilde, Denmark) were coated with 50 µl of purified
Glb33 and rGlb33 at varied concentrations between 0.3 and 20 µg/ml in
PBS at 4 °C for 16 h and blocked with 1% BSA in PBS at
37 °C for 30 min. After being washed with PBS containing 0.05%
Tween 20 (PBST), the plates were incubated with 50 µl of patient's
serum 20 times diluted or 100 µl of mouse antiserum 5,000 times
diluted, with 1% BSA in PBST at 4 °C for 16 h. The plates were
finally incubated with peroxidase-labeled anti-human IgE
(BIOSOURCE International, Inc., Camarillo, CA), or
peroxidase-labeled anti-mouse IgG (E. Y. Laboratories Inc., San Mateo,
CA) diluted appropriately with 1% BSA in PBST. The peroxidase
activity was determined with o-phenylenediamine as a
substrate as described previously (11). Mouse antiserum was prepared
by three-time intraperitoneal injections of the purified Glb33 (50 µg
of protein per mouse in 100 µl of emulsion with Freund's complete or
incomplete adjuvant) to female ddY mice (Japan SLC, Inc., Hamamatsu,
Japan). The human sera were collected from patients whose consents were obtained. From among patients under medical treatment for atopic dermatitis and/or bronchial asthma at the University Hospital, 36 sera
with positive RAST values for rice seed proteins, and 12 sera with
negative RAST values for the rice proteins were selected and used for
the following experiments.
SDS-PAGE and Western Blot Analysis--
Proteins were extracted
from each tissue of rice plants according to the methods of Rensink
et al. (17) and De Rocher et al. (18). Briefly,
each tissue sample was ground to fine pieces in a blender and suspended
in 10 ml/g PBS containing 5 mM EDTA and 1 mM phenylmethylsulfonyl fluoride. After being kept
at 4 °C with gentle shaking for 14 h and treated with
ultrasonication for 1 min on ice, the tissue sample was passed through
a piece of gauze and centrifuged at 15,000 × g for 15 min. The supernatant was dialyzed against distilled water and then
freeze-dried.
The crude extracts of each tissue of rice plant and purified Glb33
proteins were separated by SDS-PAGE (12% acrylamide) according to
Laemmli's method (19); proteins in the gel were stained with Coomassie
Brilliant Blue R-250. Proteins separated by SDS-PAGE were
electrophoretically blotted onto a polyvinylidene difluoride membrane
(20). After being blocked with 1% polyvinylpyrrolidone (Mr 40,000) in PBS or 3% BSA in PBS, the
membrane was incubated with the mouse anti-Glb33 antiserum 500-1,000
times diluted with 1% BSA in PBS or with the patient' serum 8 times
diluted with 1% BSA in PBS, at 20 °C for 3 h. The membrane was
washed with PBST and incubated with peroxidase-labeled anti-mouse IgG
(E. Y. laboratories Inc.) or peroxidase-labeled anti-human IgE
(BIOSOURCE International, Inc.) diluted
appropriately with 1% BSA in PBS. Activity staining for peroxidase was
done with either an enhanced chemiluminescence (ECL) detection kit
(Amersham Pharmacia Biotech, Uppsala, Sweden) or
4-chloro-1-naphthol.
RT-PCR Analysis--
Total RNA was isolated from seed, stem,
leaf, and seedling tissues of rice by a phenol-SDS extraction method
(12). RT-PCR was performed using SuperScript one-step RT-PCR
system (Life Technologies, Inc.) according to the
manufacturer's instructions. Total RNA (1 µg each) with specific
primers for the full-length cDNA described above were used for
RT-PCR reaction at 25 cycles. Aliquots of PCR product were separated on
a 1.0% agarose gel, blotted to Hybond-N+ nylon membranes (Amersham
Pharmacia Biotech); hybridization and detection with the
digoxigenin-labeled Glb33 cDNA were performed using DIG DNA
labeling and detection kit (Roche Molecular Biochemicals, Mannheim, Germany) according to manufacturer's instructions.
Assay for Glyoxalase I Activity--
Glyoxalase I was measured
following a previously described method (21) with slight modification.
Briefly, the substrate solution (100 µl) containing 0-20
mM methylglyoxal and 5 mM glutathione in 20 mM Tris-HCl, pH 7.0, was put in both sample and reference cuvettes set at a double-beamed spectrophotometer (Hitachi, model U2001, Tokyo, Japan) and held at 25 °C. To the sample cuvette was
added 10 µl of the enzyme solution containing 4 µg of protein and
incubated at 25 °C for 1 min. Initial velocity of the reaction was
determined by monitoring changes of absorbance of the reaction mixture
at 240 nm. The UV absorbance was converted to mole quantity by
using the molecular coefficient of 3,370 for
S-lactoylglutathione (22). Yeast glyoxalase I used for
comparison was from Sigma.
Isolation of Glb33 and Its Reactivity with IgE--
Salt-soluble
proteins extracted from rice were fractionated by an anion-exchange
chromatography of DEAE-Sepharose, and fractions with a peak of UV
absorbance were individually collected and subjected to SDS-PAGE and
IgE binding assay. The fraction, which showed positive reaction to
patients' IgE and contained the 33-kDa protein, was subjected to a
further purification by HPLC. Purity of the preparation was assessed by
SDS-PAGE followed by Coomassie Brilliant Blue R-250 staining (see Fig.
1A). The purified 33-kDa
protein, referred to as Glb33, was dialyzed against PBS and kept at
Cloning and Sequence Analysis of a cDNA Encoding the
Glb33--
Because no N-terminal amino acid was recovered from the
purified protein on the peptide sequence analysis, the Glb33
preparation was digested with trypsin to generate internal peptides.
The N-terminal amino acid sequences of two peptides isolated from the
tryptic digest of Glb33 were determined to be
GNAYAQVAIGTEDVY and IASFLDPDGWK, and consequently, a
degenerate oligonucleotide mixture for the sequence underlined was
synthesized. By screening of the rice cDNA library with the
degenerate oligonucleotide probe, three positive clones were obtained,
and their DNA sequences were determined. Since the chemically
determined peptide sequence was present in the deduced amino acid
sequence of the cDNAs, but neither stop codon nor polyadenylation
signal sequence was found in the DNA sequences, the 3'-end of the
cDNAs were extended by PCR using the gene-specific primer. About
500-base pair DNA fragments amplified by the PCR were cloned into
plasmid and sequenced. Finally, RT-PCR was performed followed by DNA
sequencing of four independent clones to obtain the precise sequence
using a set of primers to amplify the open reading frame of the cDNA.
The cDNA contained the 873 base pairs of open reading frame
(excluding the stop codon), which encoded a 291-amino acid protein with
a theoretical molecular mass of about 32.6 kDa and pI of 5.4. At 73 and
115 base pairs downstream from the stop codon (TGA) in the
3'-untranslated region, two polyadenylation signals were found. The
sequences of the two tryptic peptides from purified Glb33 can be
localized in the deduced amino acid sequence and start after a lysine
residue, according to the tryptic proteolysis consensus site. From
these sequence data and results of the expression experiments
described below, this cDNA clone was concluded to encode Glb33.
The deduced amino acid sequence of Glb33 revealed neither hydrophobic
region, found in typical signal sequences, at the 5'-end of the coding
region nor potential N-glycosylation site. Neither signal
sequence nor other hydrophobic region throughout the sequence suggests
that Glb33 is a cytoplasmic protein. The Glb33 was shown to have two
repeat homologous sequences, each containing several conserved regions.
By using the BLAST program, three hypothetical proteins (the
GenBankTM accession numbers Z74962, Y10782, and
Z97064 for Brassica oleracea (cabbage) (23),
Sporobolus stapfianus (resurrection grass) (23), and
Citrus X. paradisi (grapefruit) (24), respectively) with
unassigned function were found to be highly homologous (about 90%
identity) to Glb33. Furthermore, more than 20 sequences of glyoxalase I
enzymes from plants, mammals, yeast, and bacteria were also retrieved
from the protein data bases, though the sequence identities were low
(30-50% identity). A phylogenetic tree of these homologous sequences
is shown in Fig. 2A. Among
these glyoxalase I enzymes, the overall structure, consisting of two
repeat homologous sequences as was the case of Glb33, was found only in
the yeast glyoxalase I sequence (25). Such a repeat sequence was also found in the plant hypothetical proteins described above, although it
is yet unknown whether or not these hypothetical proteins exhibit glyoxalase I activity. The N- and C-terminal halves, named N- and
C-halves, respectively, of these proteins with the repeat sequence were
individually compared with one another and to some other glyoxalase I
enzymes. An alignment of these sequences, including tomato
(Lycopersicon esculentum) (26) and E. coli (27)
glyoxalase I enzymes, is shown in Fig. 2B. The N- and
C-halves of Glb33 highly resemble their corresponding regions in the
resurrection grass (GenBankTM accession number
Y10782) in which all putative binding sites for metals and glutathione
were conserved. Both the N- and C-halves of Glb33 were similar to
glyoxalase I of E. coli rather than that of tomato in terms
of the position of sequence deletions or insertions as well as sequence
identity. The sequence identities of Glb33 with several
homologous proteins and enzymes are summarized in Table
I.
Immunological Reactivity of Native and Recombinant Glb33
Proteins--
The recombinant Glb33 (rGlb33) was first expressed as a
fusion protein with thioredoxin and His-tag, enzymatically cut apart from thioredoxin and His-tag, and then purified by the
Ni2+-affinity chromatography. The purified rGlb33 is shown
to have a molecular mass of 33 kDa, which is identical to that of
native Glb33 (nGlb33), by SDS-PAGE analysis (Fig. 1A).
Immunoblot analyses using the mouse anti-nGlb33 serum and pooled
patients' sera revealed that rGlb33 reacted well with both the
Glb33-specific mouse IgG and human IgE (Fig. 1, B and
C). Immunological similarity of rGlb33 to the native one was
further confirmed by ELISA using the mouse and human antibodies; the
rGlb33 and the nGlb33 showed comparable reactivities (Fig.
3, A and B).
Glyoxalase I Activity of Glb33--
Because the sequence of Glb33
was homologous to several glyoxalase I enzymes even at several
restricted regions, glyoxalase I activity was assayed for both nGlb33
and rGlb33 proteins. Both Glb33 proteins were found to catalyze the
formation of S-lactoylglutathione from methylglyoxal and
glutathione in a dose-dependent manner (Fig.
4A). However, the enzyme
kinetics of Glb33 against methylglyoxal appeared to be different from
that of yeast glyoxalase I analyzed for comparison (Fig.
4B). Based on the Hill's plot for these kinetic data, the
Km values on native and recombinant Glb33 proteins were calculated to be 7.6 and 11 mM, respectively, which
were four to five times higher than the value (2.0 mM)
calculated for the yeast enzyme by the Lineweaver-Burk plot. The
Vmax value for Glb33 per unit protein was
estimated to be about one-sixth that of the yeast glyoxalase I. The
catalytic ability (Vmax/Km) of Glb33 as glyoxalase I was calculated to be about Stage- and Tissue-specific Expression of Glb33--
Glb33
expression in some tissues of rice plants and in seeds at different
stages of maturation was analyzed at mRNA and protein levels by
RT-PCR/DNA blot and Western blot analyses, respectively (Fig.
5). Total RNA and protein were prepared
from rice seeds at different stages of maturation (5, 8, 11, 14, 17, 20, 23, and 26 days after flowering (DAF)) and from other tissues. The
RNA was used as a template for RT-PCR, and the protein was for
SDS-PAGE/immunoblot analysis with the anti-Glb33 antibody. The Glb33
transcript was detected in seeds at all maturation stages tested and
also in stem and leaf. At protein level, Glb33 was also detected in
stem and leaf and in seeds harvested even at earlier stages of
maturation (5-11 DAF).
In the present study, both of the isolated and recombinant Glb33
proteins revealed IgE reactivity to several patients' sera as examined
by Western blotting and ELISA (Figs. 1 and 3), indicating that Glb33
and its cDNA are indeed for the rice 33-kDa allergen. Some
N-linked carbohydrate chains containing xylose and fucose of
plant and insect glycoproteins have been suggested to serve as an
epitope recognized by a certain population of IgE antibodies from
allergic patients, as well as IgG antibodies of rabbits immunized with
a plant glycoprotein (28). However, it is unlikely that rice Glb33 has
such carbohydrate epitopes of plant glycoproteins, because no
potential N-linked glycosylation site was found in the
Glb33 amino acid sequence, and the molecular mass (33 kDa) of Glb33
estimated by SDS-PAGE agreed well with the size of Glb33 polypeptide
(32.4 kDa) calculated from the amino acid sequence. Furthermore, rGlb33
expressed in E. coli showed molecular mass and immunological
reactivity almost identical with those of nGlb33 (Figs. 1 and 3). These
results also suggest that Glb33 has no antigenic N-linked
sugar chain as epitope recognizable by the patients' IgE and mouse
IgG.
Glyoxalase I is a ubiquitous enzyme widely found in various organisms
from mammals to bacterium. The enzymes of mammals, plants, and
bacterial species have been reported to possess approximate molecular
masses of 18-19 kDa, and only an exceptional one is that from yeast
with a molecular mass of about 37 kDa (about twice as large as the
others). The sequence of Glb33 was similar to that of yeast glyoxalase
I in terms of the overall structural organization: two repeat
homologous sequences. However, the sequence of each monomeric unit of
Glb33 was similar to bacterial glyoxalase I rather than the yeast and
known plant enzymes, such as Indian mustard (Brassica
juncea) (29) and tomato (L. esculentum) (26). These two
plant glyoxalase I enzymes possess the same size of polypeptide (185 residues) and similar amino acid sequence (76% identity). In contrast,
Glb33 is larger in size (291 residues) and shows lower similarities
(30-35% identity). These structural properties suggested that Glb33
is not a rice homologue of the glyoxalase I enzymes isolated from
Indian mustard and tomato. The saturation curves of Glb33 and yeast
glyoxalase I for methylglyoxal suggest that the kinetic property of
Glb33 is different from that of yeast glyoxalase I (Fig. 4).
Furthermore, the anti-Glb33 antibody did not cross-react with yeast
glyoxalase I.2 Therefore,
Glb33 would not be a plant homologue of the yeast-type glyoxalase I
either. As a consequence, we propose that Glb33 isolated from rice
seeds could be a novel type of plant glyoxalase I.
In conclusion, the 33-kDa protein in the salt-soluble fractions of rice
seed proteins is one of the rice allergens and a novel type of plant
glyoxalase I. The results presented here raise the possibility of
eliminating or suppressing Glb33 by molecular genetic means (30),
unless the presence of this allergen is critically important in plant cells.
INTRODUCTION
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-amylase/trypsin inhibitor family (3, 4). Some
other wheat proteins, glutenin and gliadin, have also been identified
as IgE-reactive proteins (5).
-amylase inhibitors, which were immunologically
cross-reactive proteins constituting a multigene family (10-12).
Another allergen with a size of 26 kDa, recognized by patients' IgE
less frequently, was identified as the major seed storage protein,
-globulin (13). However, the other two proteins of about 33 and 56 kDa that exhibit IgE-reactivity have not yet been identified, though
these proteins showed IgE reactivity stronger than the 14-16-kDa
allergens with only part of the patients allergic to cereals
(9).
EXPERIMENTAL PROCEDURES
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-tosyl-L-phenylalanylchloromethyl
ketone-treated trypsin at the enzyme/protein ratio (w/w) of
1/100 in 50 mM Tris-HCl buffer, pH 8.0, containing 10 mM CaCl2 for 6 h, and the tryptic peptides were applied to a reverse phase HPLC equipped with an ODS column (Biofine PO, Jasco, Tokyo, Japan). The peptides were separated by
eluting with a linear gradient of acetonitrile from 0 to 50% in 0.1%
trifluoroacetic acid. The isolated peptides were adsorbed on
polyvinylidene difluoride membrane and subjected to a peptide sequencer (Applied Biosystems, model 476A, Foster City, CA).
gt11 (10, 12) derived from
maturing rice seeds (O. sativa L. Japonica cv.
Nipponbare). The cDNA inserts of positive phage clones were
amplified by PCR and subcloned into a plasmid vector pUC118. For the
extension of the 3'-end using the 3'-rapid amplification of cDNA
ends technique, the first strand cDNA was synthesized by reverse
transcriptase (SuperScript II, Life Technologies, Inc.) with an
adopter-combined oligo(dT) primer, 5'-CAGAATTCAGCTGCAGGATCC(T)12-3', and poly(A)+RNA, which had been purified from maturing rice seeds with
Oligotex dT-30 (TaKaRa, Osaka, Japan), as the template. The DNA
was then amplified by PCR using a sense primer,
5'-GCCATGTTGGGCTATGCTGA-3' (nucleotide positions 616-635 of the
sequence, GenBankTM accession number AB107042,
registered in the data base), and an adapter primer as an antisense
primer, 5'-CAGAATTCAGCTGCAGGATCC-3'. By using the PCR product as a
template, a nested PCR was done with a sense primer,
5'-GGTGTCACAGAATATACCAAGGG-3' (nucleotide positions 676-698), and the
antisense adapter primer as above, and the PCR product was cloned into
pUC118. Finally, to obtain a full-length cDNA for Glb33, PCR was
done by using a sense primer, 5'-ATCCTCCCACCTCGGCTCGA-3' (nucleotide
positions 9-28), an antisense primer, 5'-CCTAGCACAGAACTTGGGCC-3'
(nucleotide positions 921-940), and the first strand cDNA as a
template as described above. Nucleotide sequence was determined by a
DNA sequencer (Applied Biosystems, model 373) with the dye terminator
cycle sequencing FS Ready reaction. Plasmid DNAs from at least
four independent Escherichia coli clones were sequenced.
Homologous sequences were identified by searching through the BLAST
program of the National Center for Biotechnology Information; the
obtained sequences were compared one to another by the
computer-assisted method of Higgins and Sharp (15).
20 °C until further use.
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ABSTRACT
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EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
20 °C until use.
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Fig. 1.
Reactivity on immunoblotting of the purified
native and recombinant Glb33 proteins with IgE of a patients' serum
and IgG of a mouse antiserum raised against native Glb33. The
native Glb33 purified from rice seed proteins (lane 1), the
recombinant Glb33 expressed in E. coli (lane 2),
and a molecular mass standard (Mr) were
subjected to SDS-PAGE (12% acrylamide gel) under reducing condition
and stained with Coomassie Brilliant Blue R-250 (A). The
proteins were blotted onto polyvinylidene difluoride membrane and
stained with IgE in a patient's serum (B) or IgG in the
mouse antiserum raised against the native Glb33 (C) by the
ECL method.
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Fig. 2.
Sequence similarity of Glb33 to glyoxalase I
and related proteins. A, phylogenetic tree of
glyoxalase I enzymes and related proteins. The amino acid
sequences of rice Glb33 (O. sativa L.), the hypothetical
proteins of resurrection grass (S. stapfianus,
GenBankTM accession number Y10782) (23) and cabbage
(B. oleracea, GenBankTM accession number
Z74962) (23), grapefruit (Citrus paradisi,
GenBankTM accession number Z97064) (24), and
glyoxalase I enzymes of E. coli (27), tomato (L. esculentum) (26), Indian mustard (B. juncea) (29),
human (Homo sapiens) (31), and yeast (Saccharomyces
cerevisiae) (25) are subjected to phylogenetic analysis by the
method of Higgins and Sharp (15). B, amino acid sequence
alignment of rice Glb33, a hypothetical protein from S. stapfianus (resurrection grass), and glyoxalase I enzymes
from E. coli, L. esculentum (tomato), and
S. cerevisiae (yeast) as analyzed by the method of Higgins
and Sharp (15). Insertions added to obtain maximum matching are shown
by hyphens. The N-terminal (N) and C-terminal
(C) halves of Glb33, resurrection grass, and yeast
glyoxalase I enzymes are separately aligned. The amino acid residues
conserved among the eight sequences are boxed, and putative
binding sites for metals and glutathione are indicated by the symbols $
and #, respectively, above the sequence.
Amino acid sequence identity (%) of Glb33 with a theoretical protein
from S. stapfianus (resurrection grass) and several glyoxalase I
enzymes
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Fig. 3.
Reactivity on ELISA of the purified native
and recombinant Glb33 proteins with IgE antibodies of patients' sera
and IgG of a mouse Glb33 antiserum. ELISA plates were coated at
varying concentrations with the native Glb33 purified from rice seed
proteins (closed symbols) and the recombinant Glb33
expressed in E. coli (open symbols) and incubated
with the sera of two RAST-positive (circles and
squares) and one RAST-negative (triangles)
patients (A) and the mouse anti-Glb33 serum (B).
The human IgE and mouse IgG, which bound to the plates, were detected
with the peroxidase-labeled secondary antibodies, respectively. The
antibody binding is represented as the absorbance at 492 nm
(A492) on the ELISA assay.
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Fig. 4.
Glyoxalase I activity of Glb33.
A, the glyoxalase I activity was measured with the
methylglyoxal concentration of 20 mM as described under
"Experimental Procedures." Different doses: 0 (+), 0.1 µg
(closed circles), and 0.2 µg (closed squares)
of the recombinant Glb33 protein were added to the reaction mixture.
B, glyoxalase I activity was measured for the native and
recombinant Glb33 proteins (closed and open
circles, respectively) and for the yeast enzyme (open
squares). Methylglyoxal concentration varied from 0 to 20 mM and that of glutathione was set at 5 mM.
Activity was represented as the initial rate
(Vo) of S-lactoylglutathione
production (µmol/min).
View larger version (83K):
[in a new window]
Fig. 5.
Expression of Glb33 in various tissues of
rice plant. SDS-PAGE (A) and Western blot analysis
(B) were done for the total protein prepared from maturing
seeds of 5, 8, 11, 14, 17, 20, 23, and 26 DAF, stem, and leaf. The
protein amounts applied to each lane were one-fifth of total proteins
extracted from one seed and total proteins extracted from 150 mg of
stem and 15 mg of leaf. The gel was stained with Coomassie Brilliant
Blue R-250, and Glb33 on the blotted membrane was detected with the
mouse anti-Glb33 antibody. RT-PCR analysis (C) was also done
for total RNA prepared from maturing seeds at 5, 8, 11, 14, 17, 20, 23, and 26 DAF, stem, and leaf. After being blotted on a nylon membrane the
RT-PCR products were detected by hybridizing with the
digoxigenin labeled Glb33 cDNA.
DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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ACKNOWLEDGEMENTS |
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We thank Professor R. Nakamura (Nippon University) for his encouragement and helpful suggestions, Dr. T. Adachi (Tokyo Medical and Dental University) for his kind help on peptide isolation, and Dr. A. Alvarez for reading the manuscript and editorial suggestions. We also thank Mr. T. Izawa (Agricultural Center of Aichi Prefecture) for the generous provision of rice seed samples and M. Inagaki for assistance on protein purification.
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FOOTNOTES |
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* This work was supported in part by grants-in-aid for Promotion of Basic Research Activities for Innovative Biosciences (PROBRAIN) (to T. M.) and for Scientific Research from the Ministry of Education, Science, Sports and Culture of Japan (to T. M., K. K., and N. A.).The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) AB017042.
§ To whom correspondence should be addressed. Fax: 81-52-789-4128; E-mail: tmatsuda@agr.nagoya-u.ac.jp.
Published, JBC Papers in Press, January 3, 2001, DOI 10.1074/jbc.M010337200
2 Y. Usui, and T. Matsuda, unpublished result.
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ABBREVIATIONS |
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The abbreviations used are: IgE, immunoglobulin class E; IgG, immunoglobulin class G; PBS, phosphate buffered saline; HPLC, high performance liquid chromatography; PCR, polymerase chain reaction; RT-PCR, reverse transcription-PCR; RAST, radio allergosorbent test; ELISA, enzyme-linked immunosorbent assay; BSA, bovine serum albumin; DAF, days after flowering.
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