From the First Department of Biochemistry,
¶ Equipment Center, and
Second Department of Surgery,
Hamamatsu University School of Medicine, Hamamatsu, Shizuoka 431-3192, Japan, ** Department of Biochemistry, Toyama Medical and Pharmaceutical
University Faculty of Medicine, Toyama 930-0194, Japan, and
Institute for Enzyme Research and the
Department of Biochemistry, University of Wisconsin, Madison, Wisconsin
53706
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ABSTRACT |
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L-Serine metabolism in
rat liver was investigated, focusing on the relative contributions of
the three pathways, one initiated by L-serine dehydratase
(SDH), another by serine:pyruvate/alanine:glyoxylate aminotransferase
(SPT/AGT), and the other involving serine hydroxymethyltransferase and
the mitochondrial glycine cleavage enzyme system (GCS). Because serine
hydroxymethyltransferase is responsible for the interconversion between
serine and glycine, SDH, SPT/AGT, and GCS were considered to be the
metabolic exits of the serine-glycine pool. In vitro, flux
through SDH was predominant in both 24-h starved and glucagon-treated rats. Flux through SPT/AGT was enhanced by glucagon administration, but
even after the induction, its contribution under quasi-physiological conditions (1 mM L-serine and 0.25 mM pyruvate) was about L-Serine is known to be physiologically important as a
substrate for hepatic gluconeogenesis (1), in addition to its role as a
major donor of one-carbon units. It has been established that three
pathways are involved in the metabolism of L-serine: 1)
that catalyzed by serine hydroxymethyltransferase
(SHMT),1 which is responsible
for the reversible conversion of L-serine and
tetrahydrofolate (THF) to glycine and 5,10-methylene-THF; 2) that
catalyzed by serine:pyruvate/alanine:glyoxylate aminotransferase (SPT/AGT), leading to the formation of hydroxypyruvate; and 3) that
catalyzed by L-serine dehydratase (SDH), resulting in the formation of pyruvate (2). Glycine formed by the action of SHMT is
thought to be metabolized mainly by the mitochondrial glycine cleavage
enzyme system (GCS) (3), whereas hydroxypyruvate and pyruvate are
either catabolized or converted to glucose depending on the nutritive
conditions of animals (Fig. 1).
of that through SDH.
Flux through GCS accounted for only several percent of the amount of
L-serine metabolized. Relative contributions of SDH and
SPT/AGT to gluconeogenesis from L-serine were evaluated in vivo based on the principle that 3H at the 3 position of L-serine is mostly removed in the SDH pathway, whereas it is largely retained in the SPT/AGT pathway. The results showed that SPT/AGT contributed only 10-20% even after the
enhancement of its activity by glucagon. These results suggested that
SDH is the major metabolic exit of L-serine in rat liver.
INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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Fig. 1.
Three alternative pathways involved in the
metabolism of L-serine in the liver. Solid
arrows show the direction of each reaction in vivo and
do not necessarily mean that the reactions are irreversible in
vitro. In gluconeogenesis via pyruvate, oxaloacetate formed from
pyruvate in mitochondria is transferred to the cytosol in the
form of aspartate or L-malate and then converted to
2-phosphoglycerate in the cytosol by way of oxaloacetate and
phosphoenolpyruvate. In this figure this part of the gluconeogenic
pathway is simplified. CH2-THF,
5,10-methylenetetrahydrofolate.
SHMT exists in some eukaryotic cells, including hepatocytes, as distinct isozymes, one located in the cytosol and the other in mitochondria (referred to as cSHMT and mSHMT, respectively) (2). As for their physiological functions in the liver and kidney, mSHMT has been proposed to be coupled with GCS in the conversion of glycine to serine, using 5,10-methylene-THF formed by the latter enzyme and thus regenerating THF (2, 4). It was also proposed that cSHMT cooperates with mSHMT and GCS to transfer one-carbon units from mitochondria to the cytosol (5). Therefore, the degradation of glycine by GCS appears to be usually associated with synthesis of serine from another molecule of glycine. The SPT/AGT activity is essentially confined to the liver and shows a unique species-specific organelle distribution in mammals, based on their food habits. In carnivores such as dog, this enzyme is largely located in mitochondria, whereas in humans and herbivores such as rabbit, it is entirely peroxisomal (6-8). In rat liver, its activity is detected in both the organelles, but only the mitochondrial activity is induced by glucagon, as a result of alternative transcription initiation from two sites on a single gene and selective stimulation by cAMP of the transcription from the upstream start site (9, 10). One of the major physiological roles of peroxisomal SPT/AGT is catalysis of the conversion of glyoxylate to glycine. This view is supported by the overproduction of oxalate in primary hyperoxaluria type 1, an inborn error of glyoxylate metabolism caused by a functional deficiency of peroxisomal SPT/AGT (11). Mitochondrial SPT/AGT has been presumed, mainly because of its induction by glucagon (2, 12), to participate in gluconeogenesis, but supporting evidence is still insufficient, and whether peroxisomal SPT/AGT is involved in serine metabolism, in addition to its role in the conversion of glyoxylate to glycine, has not been studied so far. SDH is largely confined to the liver and located solely in the cytosol. The liver SDH activity is known to be inversely related to body size in higher animals (13). In the rat, therefore, its activity is fairly high and induced under some gluconeogenic conditions (2). However, its substantial contribution to the metabolism of L-serine has been questioned, despite the high activity in rat liver, mainly because of its very high Km (50-70 mM) for L-serine, and indeed the results of experiments involving 14C-serine (14) argued against this possibility.
Flux of the L-serine metabolism through the different
pathways had been studied mainly in rat liver and in the 1970s, when the knowledge of SPT/AGT was not sufficient. It is possible from the
considerations mentioned above that L-serine metabolism in different animal species shows distinct patterns, and thus
investigation of this subject is necessary and intriguing. Such work
was initiated focusing on the relative contributions of the three
pathways, the SDH and SPT/AGT pathways and that involving SHMT and GCS
(Fig. 1). This paper deals with the L-serine metabolism in
rat liver in vitro and in vivo. The metabolism of
L-serine in the livers of other animal species will be
described in an accompanying paper.
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EXPERIMENTAL PROCEDURES |
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Materials-- [1-14C]Glycine (54 mCi/mmol), L-[1-14C]serine (55 mCi/mmol), and L-[3-14C]serine (55 mCi/mmol) were purchased from American Radiolabeled Chemicals (St. Louis, MO), and L-[3-3H]serine (28 Ci/mmol) was from Amersham Pharmacia Biotech. Glucagon, THF, and glyoxylate reductase were from Sigma, and lactate dehydrogenase was from Roche Molecular Biochemicals. Analytical grade ion exchange resins, AG 1 × 8 (100-200 mesh) and AG 50W × 8 (100-200 mesh), were obtained from Muromachi Chemical Industries (Tokyo, Japan), and used after conversion to their acetate and H+ forms, respectively. An anti-SDH antibody was raised in rabbits using a rat liver SDH as an antigen (15), and purified by precipitation with 45% saturated ammonium sulfate, followed by negative adsorption to a DE52 column.
Determination of Enzyme Activities-- For determination of the SDH activity, a direct spectrophotometric assay (16) was used, but at a physiological pH, 7.5. The SHMT activity was determined using the binding assay (17) in which [14C]methylene-THF formed from 5 mM L-[3-14C]serine (0.05 mCi/mmol) was bound to a DEAE-cellulose paper (DE-81) (Whatman Japan, Tokyo, Japan), and the radioactivity on the paper was counted after washing.
Procedures for In Vitro Experiments-- Male Wistar rats weighing ~200 g (Japan SLC, Hamamatsu, Japan) were divided into two groups. One was starved for 24 h, and the other was subjected to glucagon induction as described previously (18). Briefly, the animals were starved for 24 h, and then glucagon was injected intraperitoneally at a dose of 150 µg/100 g of body weight. The starvation was continued until killing another 24 h later.
Subcellular fractionation of rat liver was carried out essentially as described by de Duve et al. (19). The liver was homogenized in 2.5 vol of 0.25 M sucrose, pH 7.4, containing 3 mM imidazole and HCl and 0.1 mM EDTA using a loosely fitted Potter-Elvehjem homogenizer. The homogenate was centrifuged at 650 × g for 10 min, and the precipitate was homogenized and centrifuged again as above. The combined 650 × g supernatants (cytoplasmic extract) were further centrifuged at 25,000 × g for 20 min, and the resultant precipitates including mitochondria and peroxisomes were suspended in the sucrose solution to make a 2.5 ml suspension/g of liver (Mit-Ps suspension). The 25,000 × g supernatant was further centrifuged at 105,000 × g for 60 min, and the resultant supernatant was adjusted with the sucrose solution to 5 ml/g of liver (soluble fraction). A portion of the soluble fraction was treated with an anti-SDH IgG and a goat anti-rabbit IgG to immunoprecipitate the SDH activity, according to the protocols used in our previous study (18). A reconstituted cytoplasmic extract was prepared by mixing the Mit-Ps suspension and the soluble fraction, both from a given wet weight of the starting liver, and an SDH-depleted cytoplasmic extract was prepared by combining the Mit-Ps suspension with the anti-SDH-treated soluble fraction. When a heavy mitochondrial fraction was to be prepared, the cytoplasmic extract was centrifuged at 3300 × g for 10 min, and the precipitate was suspended in the sucrose solution to make a 2.5-ml suspension/g of liver. In preliminary experiments, the recovery of protein from 1 g of liver to the heavy mitochondrial and the Mit-Ps fractions was ~15 and 32 mg, respectively.
The reaction mixture (1 ml) for the L-serine metabolism in vitro comprised 25 mM potassium phosphate, pH 7.4, 40 mM Tricine-NaOH, pH 7.4, a suitable quantity of 1 M sucrose for adjustment of the osmolarity, various additions, and the subcellular preparations equivalent to 40 mg of liver. After 5 min of preincubation, the reaction was initiated by the addition of the substrate, carried out at 37 °C for 60 min, and terminated by adding 200 µl of 2 N perchloric acid, followed by neutralization with 1 N KOH. Glycine was determined as a phenyl isothiocyanate derivative using a PICO-TAG amino acid analyzer (Waters, Milford, MA). Hydroxypyruvate, pyruvate, and lactate were measured enzymatically (20). To determine 14CO2 evolution, a parallel incubation with L-[1-14C]serine (0.05 mCi/mmol) as the substrate was run simultaneously, the 14CO2 evolved was trapped, and its radioactivity was counted as described previously (21), with a counting efficiency of ~71%. The reactions for determination of the 14CO2 evolution from [1-14C]glycine (0.05 mCi/mmol) by mitochondrial suspensions were carried out under the same conditions as above.
Preparation of Doubly Labeled Substrates-- L-[3-3H,14C]Serine was prepared by mixing L-[3-3H]serine (1 mCi) and L-[3-14C]serine (0.1 mCi), followed by passage through an AG 1 column (bed vol, 1 ml) to remove any possible acidic impurities. The effluent was lyophilized, and the dried residue was dissolved in Krebs-Ringer phosphate buffer, pH 7.4. Then nonradioactive L-serine was added to a final concentration of 0.5 mM.
L-[3-3H,14C]Lactate was prepared from L-[3-3H,14C]serine through the sequential actions of rat liver SDH, partially purified (second acetone fraction) according to the method of Nakagawa et al. (22), and lactate dehydrogenase. The reaction mixture (8 ml) comprised 0.1 M potassium phosphate, pH 8.0, 0.1 mM pyridoxal phosphate, 1 mM EDTA, 22 units of lactate dehydrogenase, 41 units of SDH, 0.25 mM L-[3-3H,14C]serine (3H, 233.6 µCi; 14C, 23.8 µCi), and 0.33 mM NADH. The reaction was initiated by the addition of L-[3-3H,14C]serine, and the decrease in the absorbance at 340 nm was monitored at 37 °C. H2SO4 was then added to 0.83 N, and after the denatured proteins had been removed by centrifugation, the acidified reaction mixture was subjected to partitioning chromatography on a silicic acid column with CB8 (8% n-butanol in chloroform, equilibrated with 0.5 N H2SO4) as the eluting solvent, essentially according to the method of Varner (23), using a longer column (0.8 × 60 cm). L-[3-3H,14C]Lactic acid eluted was quantitatively transferred to the aqueous phase by neutralization with 1 mM NaOH to a phenol red end point and vigorous agitation to ensure intimate contact between the two phases. The pooled aqueous phase was treated with stearate-deactivated activated charcoal, followed by filtration through a 0.45-µm polytetrafluoroethylene filter (Ekicrodisc 13CR; Gelman Sciences Japan, Tokyo, Japan) (24). The filtrate was lyophilized and then dissolved in 2.4 ml of Krebs-Ringer phosphate buffer. [3-3H,14C]Pyruvate was prepared from L-[3-3H,14C]serine (3H, 150 µCi; 14C, 16.7 µCi) in the same way, except that lactate dehydrogenase and NADH were omitted from the reaction mixture.
D-[3-3H,14C]Glycerate was prepared from L-[3-3H,14C]serine through the sequential actions of SPT10, a recombinant rat liver SPT/AGT (25), and glyoxylate reductase. The reaction mixture (8 ml) comprised 0.1 M Tricine-NaOH, pH 8.0, 0.1 mM pyridoxal phosphate, 1 mM EDTA, 10 mM Na-pyruvate, 32 units of glyoxylate reductase, 12 units of SPT10, 0.25 mM L-[3-3H,14C]serine (3H, 233.6 µCi; 14C, 23.8 µCi), and 0.33 mM NADH. The reaction was carried out and stopped by adding H2SO4, and then the acidified reaction mixture was subjected to partitioning chromatography, as in the case of the L-[3-3H,14C]lactate preparation, except that CB35 (35% n-butanol in chloroform, equilibrated with 0.5 N H2SO4) was used as the eluting solvent. The overall recovery of the L-[3-3H,14C]lactate, [3-3H,14C]pyruvate, and D-[3-3H,14C]glycerate preparation was 60-70% with respect to 14C.
Procedures for the Infusion and Perfusion Experiments-- Rats were starved for 48 h or subjected to glucagon induction as in the in vitro experiments. For the infusion experiment, the abdominal cavity was opened, and the vena cava was exposed under ether anesthesia. Each of 0.5 mM L-[3-3H,14C]serine (3H, 57.2 µCi, 14C, 5.85 µCi/ml), 0.5 mM L-[3-3H,14C]lactate (3H, 41.3 µCi, 14C, 5.95 µCi/ml), or 0.5 mM D-[3-3H,14C]glycerate (3H, 49.8 µCi; 14C, 5.7 µCi/ml) was infused into the portal veins of separate rats continuously for 15 min at a rate of ~400 µl/15 min, and after termination of the infusion, the rats were allowed to metabolize the infused substrates for another 5 min. During these procedures, the exposed vena cava was covered with surgical gauze wetted with 0.9% saline to minimize loss of water. Then the livers were isolated and immersed in liquid nitrogen immediately.
Perfusion of isolated rat livers was performed in a recycling system at 37 °C and 60% humidity essentially according to the method of Veneziale et al. (26), initially with 95 ml of Krebs-Ringer bicarbonate buffer, pH 7.4, containing washed bovine erythrocytes (hematocrit, 18-22%) and 3% defatted bovine serum albumin. At 60 min of the perfusion at a flow rate of 6 ± 0.3 ml/min, added to the perfusate was 2 ml of a concentrated amino acid mixture containing L-[3-3H,14C]serine (3H, 119 µCi; 14C, 13.1 µCi) or 2 ml of a nonradioactive amino acid mixture containing either 430 µmol of [3-3H,14C]pyruvate (3H, 52.8 µCi; 14C, 7.1 µCi) or 700 µmol of D-[3-3H,14C]glycerate (3H, 61.2 µCi; 14C, 6.0 µCi). The concentration of amino acids had been designed to approximate the amino acid composition of serum from fed rats (27). Where indicated, glucagon was added to the perfusate at 45 min to give a final concentration of 30 nM. At 80 min of perfusion the livers were quickly frozen in liquid nitrogen.
The frozen livers were crushed in a stainless steel pan, which had been
chilled in liquid nitrogen. Then, the frozen powder was homogenized
with 2.67 vol of 0.6 N perchloric acid. After neutralization of the acid extract with KOH, nonionic components were
separated from charged ones by sequential passage through an AG 1 column (bed vol, 1 ml) and an AG 50W column of the same size. Glucose
in the nonionic fraction was identified as the major radioactive
compound by chromatography on a high performance thin layer
chromatography plate (Silica Gel 60; Merck) with n-propanol and 2 N NH4OH (65:35, vol/vol) as the solvent,
followed by autoradiography. For determination of the
3H/14C ratio, the radioactive glucose in the
nonionic fraction was converted with hexokinase and
ATP/Mg2+ to [3H,14C]glucose
6-phosphate, followed by isolation of the latter by chromatography on
an AG 1 column (bed vol, 1 ml) with 6 N formic acid as the
eluting solvent. The eluate was evaporated in a counting vial, and then
3H and 14C were differentially counted. In the
perfusion experiment, lactate and pyruvate were isolated from another
portion of the liver extract by partitioning chromatography on a
silicic acid column, and their 3H and 14C
radioactivities were determined as above.
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RESULTS |
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Relative Contributions of Mitochondrial SHMT and SPT/AGT to the Metabolism of L-Serine-- First, we tried to compare the quantities of L-serine metabolized by mitochondrial SPT/AGT and the mitochondrial isozyme of SHMT. Heavy mitochondria corresponding to 40 mg wet weight of 24-h starved or glucagon-treated rat liver were incubated with 5 mM L-[1-14C]serine at 37 °C for 60 min in the absence or presence of 0.25, 0.5, 1, or 2 mM pyruvate to measure the 14CO2 evolution. To determine hydroxypyruvate and glycine, parallel incubations with nonradioactive L-serine were run simultaneously. Preliminary experiments showed that this amount of the mitochondrial suspension was the maximum quantity, and 60 min was the maximum incubation time with which the hydroxypyruvate formation and 14CO2 evolution from [1-14C]glycine, L-[1-14C]serine, and L-[3-14C]serine proceeded almost linearly with respect to both time and the amount of mitochondria added. As shown in Table I, the accumulation of glycine was essentially unaffected by the glucagon administration and was independent of the presence of pyruvate. In contrast, the hydroxypyruvate formation was highly dependent on the addition of pyruvate and was enhanced 20-30-fold by the glucagon treatment, in good agreement with the known induction of mitochondrial SPT/AGT by glucagon (10).
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In experiments with L-[1-14C]serine, 14CO2 evolution can be ascribed to two routes: one further metabolism of [1-14C]glycine by GCS (14) and the other enzymatic or nonenzymatic decarboxylation of [1-14C]hydroxypyruvate (28, 29). In 24-h starved rats, hydroxypyruvate formation was hardly detectable unless >0.5 mM pyruvate was added, and the 14CO2 evolution was independent of the addition of pyruvate (Table I), probably because of the low levels of the pyruvate-dependent hydroxypyruvate formation, suggesting that the 14CO2 evolved represents decarboxylation via [1-14C]glycine. Therefore, the hydroxypyruvate formation and the sum of glycine accumulation and 14CO2 evolution were taken to represent the flux of L-serine metabolism through SPT/AGT and that through SHMT, respectively. In glucagon-treated rats, on the other hand, no hydroxypyruvate formation was detectable in the absence of pyruvate, but in its presence, not only the hydroxypyruvate formation but also the 14CO2 evolution increased significantly (Table I). Because it is unlikely that pyruvate stimulates the flux through glycine only in glucagon-treated rats, we assumed that the pyruvate-dependent increase in the 14CO2 evolution represents decarboxylation by way of hydroxypyruvate. Therefore, the flux through SHMT was calculated from the sum of accumulated glycine and 14CO2 evolved in the absence of pyruvate. Likewise, the flux through SPT/AGT was calculated from the sum of accumulated hydroxypyruvate and the pyruvate-dependent increase in the 14CO2 evolution.
The concentration of pyruvate in the reaction mixture decreased considerably, being 50-70 µM after 60 min of incubation, when its initial concentration was 0.25 mM. Because the reported hepatic concentration of pyruvate in the rat is in the range of 0.04-0.25 mM (20), the incubation in the presence of 0.25 mM pyruvate can be considered to be quasi-physiological with respect to the pyruvate concentration. As summarized in Table I, the mitochondrial metabolism of L-serine under the quasi-physiological conditions was determined to be almost entirely accounted for by the SHMT pathway in the 24-h starved group. In the glucagon-treated group, on the other hand, the contribution of the SPT/AGT pathway was apparent, accounting for ~30% of the metabolism.
It has been reported that submicromolar concentrations of Ca2+ stimulate the flux of glycine metabolism through GCS in isolated rat liver mitochondria (30, 31). However, under the conditions used in this study, addition of 3 µM Ca2+ only slightly stimulated (at most 10%) the decarboxylation from [1-14C]glycine by the mitochondrial suspension. Without specific precautions to prevent isolated mitochondria from contamination by Ca2+, the incubation medium is likely to have contained enough Ca2+ to nearly fully stimulate GCS.
Activities of cSHMT and SDH in the Soluble Fraction-- In experiments with isolated mitochondria, decarboxylation from 5 mM L-[3-14C]serine proceeded almost linearly for 60 min, and under these conditions as much as 80 nmol of serine were converted to glycine or metabolized by way of glycine (compare Table I), although mitochondria corresponding to 40 mg of liver may have contained only 0.15 nmol of the THF cofactor (32). This suggested that 5,10-methylene-THF formed in mitochondria is converted in situ to free THF and CO2 through the sequential actions of 5,10-methylene-THF dehydrogenase, 5,10-methenyl-THF cyclohydrolase, and 10-formyl-THF dehydrogenase (14). In contrast, the SHMT activity in the soluble fraction required the addition of the THF cofactor, and the production of 5,10-methylene-THF proceeded linearly with time only for ~10 min, although it was proportional to the amount of the soluble fraction up to 8 mg of liver equivalent in 0.1 ml of the reaction mixture. The activity of cSHMT determined in the linear range was fairly high and ~0.5 µmol/min per g of liver. On the other hand, SDH in the cytosol catalyzed the reaction almost linearly for up to 60 min (compare Table II), and when the concentration of L-serine was 5 mM, it showed a comparable activity with that of cSHMT.
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Effect of ATP on the 14CO2 Evolution from L-[1-14C]Serine in a Cytoplasmic Extract-- In agreement with Yoshida and Kikuchi (3, 14, 33), 14CO2 production from L-[3-14C]serine exceeded that from L-[1-14C]serine when the radioactive serines were added to a mitochondrial suspension or homogenate at physiological concentrations. In homogenate or cytoplasmic extract containing the SDH activity, the decarboxylation via [1-14C]pyruvate contributes to the 14CO2 formation from L-[1-14C]serine, in addition to that via [1-14C]glycine and [1-14C]hydroxypyruvate. In the present study, the 14CO2 evolution from L-[1-14C]serine with a reconstituted cytoplasmic extract (a mixture of a soluble fraction and a Mit-Ps suspension) was augmented as much as 5-8-fold in the presence of 4 mM ATP and 10 mM Mg2+. This phenomenon was regarded as indicating that ATP/Mg2+ enhances the decarboxylation from L-[1-14C]serine via [1-14C]pyruvate, based on the following observations (Table II): 1) in experiments involving a homogenate or reconstituted cytoplasmic extract, the decarboxylation from [1-14C]pyruvate was augmented approximately 10-fold by ATP/Mg2+, but that from [3-14C]pyruvate was minimal regardless of the presence or absence of ATP/Mg2+; 2) the addition of 2 mM non-radioactive pyruvate caused ~87% reduction of the ATP/Mg2+-dependent increase in the 14CO2 evolution from L-[1-14C]serine, whereas the effect on the decarboxylation in the absence of ATP/Mg2+ was at most 20%; 3) when 5 mM L-serine was incubated with a reconstituted cytoplasmic extract, as much as 1.2 mM pyruvate was accumulated in the reaction mixture in 60 min, and the pyruvate accumulation was reduced to 0.2 mM in the presence of ATP/Mg2+; and 4) when a Mit-Ps suspension was used in place of a cytoplasmic extract, addition of ATP/Mg2+ rather inhibited slightly the L-[1-14C]serine-derived 14CO2 evolution. It was thus suggested that the supply of serine-derived pyruvate to mitochondria by SDH is much higher than formerly believed. The 14CO2 evolution from L-[3-14C]serine was independent of ATP/Mg2+ and was increased severalfold on the addition of 0.1 mM THF and 0.3 mM NADP+, but not with either one alone, as reported previously (14).
Depletion of the SDH Activity in the Soluble Fraction with an Anti-SDH Antibody-- To eliminate the 14CO2 evolution from L-[1-14C]serine via [1-14C]pyruvate and the unfavorable accumulation of pyruvate formed from serine in the reaction mixture with a reconstituted cytoplasmic extract, we attempted to deplete the SDH activity in the soluble fraction with an anti-SDH antibody. The soluble fraction corresponding to 40 mg of liver from both 24-h starved rats and glucagon-treated rats was found to contain 20-25 milliunits of the SDH activity when assayed with 5 mM L-serine as the substrate. This activity was reduced to <0.1 milliunit on immunoprecipitation of SDH with an anti-SDH IgG, whereas the effect of preimmune rabbit IgG was minimal. Table II also shows that an SDH-depleted reconstituted cytoplasmic extract showed a comparable level of the L-[1-14C]serine-derived 14CO2 release to that catalyzed by the Mit-Ps suspension alone. On the other hand, the 14CO2 release caused by reconstituted cytoplasmic extract was much higher. These results imply that the decarboxylation from L-[1-14C]serine via pyruvate was mostly eliminated by using the SDH-depleted cytoplasmic extract, and that the 14CO2 evolution observed in the absence of pyruvate represents the decarboxylation via glycine.
Relative Contributions of the Three Pathways to the Metabolism of L-Serine in a Reconstituted Cytoplasmic Extract-- To assess the roles of the SPT/AGT pathway and that via glycine in the metabolism of L-serine in cytoplasmic extracts, an SDH-depleted reconstituted cytoplasmic extract was used, and 0.1 mM THF and 0.3 mM NADP+ were included in the reaction mixture to facilitate the glycine formation from L-serine catalyzed by cSHMT. Then the flux through SPT/AGT and that through SHMT-GCS were calculated as in the case of the mitochondrial metabolism. Preliminary experiments demonstrated that the depletion of SDH did not perturb other metabolic pathways for L-serine, as judged from the decarboxylation of L-[1-14C]serine by way of glycine and the hydroxypyruvate formation in the presence of >1 mM pyruvate. For determination of the amount of L-serine metabolized by SDH (flux through SDH), a soluble fraction was used, and the pyruvate formed was determined. The use of the soluble fraction instead of a reconstituted cytoplasmic extract was to eliminate the mitochondrial metabolism of pyruvate. All reactions were carried out at 37 °C for 60 min with the subcellular preparations corresponding to 40 mg of liver.
As summarized in Table III, the flux through SDH was shown to be far higher than those through SPT/AGT and GCS under every condition examined. As for the flux through SHMT-GCS, the incubation time was out of the linear range with respect to the cSHMT-catalyzed glycine formation from serine, but a large amount of glycine accumulation was observed, and 14CO2 formation from L-[1-14C]serine in the absence of pyruvate (decarboxylation via glycine) proceeded almost linearly for 60 min (compare Table II). Under the conditions used, therefore, the formation of glycine from serine by cSHMT may have occurred fairly rapidly, followed by GCS-catalyzed gradual degradation of glycine. The contribution of the flux through GCS was relatively small compared with the flux through SDH, and that of the SPT/AGT pathway was perceptible only in the glucagon-treated group. Under the quasi-physiological conditions with 1 mM L-serine and 0.25 mM pyruvate (initial concentrations), the calculated contributions of the SDH and SPT/AGT pathways and the pathway via glycine to the metabolism of L-serine are 98, ~0, and 2%, respectively, in 24-h starved rats and 89, 8, and 2%, respectively, in the glucagon-treated rats.
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The flux through GCS may be underestimated in this experiment, because the concentration of accumulated glycine reached to only 0.07-0.12 mM, whereas its concentration in rat liver in vivo was thought to be maintained at ~2.5 µmol/g (34) by active transport and net uptake from the bloodstream, in addition to the supply from serine. However, when 2.5 mM [1-14C]glycine was incubated with a mitochondrial suspension (a suspension of 8200 × g precipitate) corresponding to 40 mg of tissue, the amounts of 14CO2 evolved were ~55 nmol/60 min for both 24-h starved rats and glucagon-treated rats. These values are less than half of the flux through SDH at 1 mM L-serine, and the calculated contributions of the flux through SDH, SPT/AGT and GCS under the supposed quasi-physiological conditions with 1 mM serine and 2.5 mM glycine were 72, ~0, and 28%, respectively, in 24-h starved rats and 74, 7, and 19%, respectively, in the glucagon-treated rats.
Relative Contributions of SDH and SPT/AGT In Vivo and in Perfused
Liver--
Among the three major pathways for L-serine
metabolism, those initiated by SDH and SPT/AGT are involved in glucose
formation under gluconeogenic conditions. To quantify the relative
contributions of the two pathways to gluconeogenesis in
vivo, we performed infusion and perfusion experiments on 48-h
starved rats and glucagon-treated rats using
L-[3-3H,14C]serine as substrate.
The principle of this experiment is shown in Fig.
2. The carbon derived from the 3 position
of L-serine is thought to be retained throughout the
gluconeogenic reactions in either pathway. On the other hand, the
hydrogen at the 3 position is expected to be largely removed in the
gluconeogenesis via pyruvate, whereas it is mostly retained in that via
hydroxypyruvate. It is known that in rat liver and kidney, in which
phosphoenolpyruvate carboxykinase is located predominately in the
cytosol (35), gluconeogenesis from three-carbon precursors such as
pyruvate, lactate, and alanine is associated with the transfer of
oxaloacetate from mitochondria to the cytosol in the form of malate or
aspartate (36). Because malate thus formed in mitochondria as an
intermediate is in rapid equilibrium with fumarate through the fumarase
reaction, hydrogen derived from the 3 position of L-serine
is expected to be largely removed through exchange with water during
the shuttling between malate and fumarate. In addition, in preparation
of L-[3-3H,14C]lactate from
L-[3-3H,14C]serine, the
3H/14C ratio decreased from 9.75 of starting
serine to 6.93, probably because of the loss of 3H at the
step of hydrolysis of -aminoacrylate, the immediate product of the
SDH reaction. In gluconeogenesis from
L-[3-3H,14C]serine via pyruvate,
therefore, the 3H/14C ratio is expected to
decrease considerably, whereas in gluconeogenesis via hydroxypyruvate,
3H as well as 14C is expected to be mostly
retained, resulting in the formation of radioactive glucose, the
3H/14C ratio of which is nearly the same as
that of the starting material.
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As shown in Table IV, these assumptions were proved to be approximately the case, by showing that 3H was almost lost on gluconeogenesis from L-[3-3H,14C]lactate or [3-3H,14C]pyruvate in both infusion and perfusion experiments. In the case of gluconeogenesis from D-[3-3H,14C]glycerate, the 3H/14C ratio of glucose formed was a little lower than that of the substrate, but this was not surprising, because we found in the perfusion experiment that radioactive pyruvate and lactate were formed from D-[3-3H,14C]glycerate, in addition to glucose, and their 3H/14C ratios were much lower than that of glucose. It is therefore conceivable that even under the gluconeogenic conditions, a portion of the 2-phosphoglycerate formed from D-glycerate is metabolized to pyruvate and then converted back to glucose, lowering the 3H/14C ratio of the latter.
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In both the infusion and perfusion experiments, 3H
was also lost on gluconeogenesis from
L-[3-3H,14C]serine, and the
3H/14C ratio of glucose formed was between
those in the cases of
L-[3-3H,14C]lactate (or
[3-3H,14C]pyruvate) and
D-[3-3H,14C]glycerate, suggesting
that both the SDH and SPT/AGT pathways participate in the
gluconeogenesis from L-serine. From proportional allotment
of the 3H/14C ratios of glucose obtained with
L-[3-3H,14C]serine between the
two control values (those obtained with
L-[3-3H,14C]lactate/[3-3H,14C]pyruvate
and D-[3-3H,14C]glycerate), the
SPT/AGT pathway was shown to account for only a trace in the liver of
48-h starved rat, and in the infusion experiment its contribution in
glucagon-treated rat was estimated to be ~10%. In the perfusion
experiment, gluconeogenesis from L-[3-3H,14C]serine as well as
that from lactate, pyruvate, and L-alanine was augmented
1.6-1.8-fold by the in situ addition of 30 nM
glucagon in both 48-h starved rats and glucagon-treated rats. It was
also observed that the 3H/14C ratio of glucose
formed from L-[3-3H,14C]serine
was lower in the in situ presence of glucagon than in its
absence, probably reflecting the known stimulation by glucagon of
gluconeogenesis from or via pyruvate (37). In the presence and absence
of in situ glucagon the contributions of the SPT/AGT pathway
in glucagon-treated rats were also estimated to be ~10 and 20%,
respectively. All these results suggested the predominant contribution
of the SDH pathway in vivo and in the perfused liver.
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DISCUSSION |
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SHMT, SDH, and SPT/AGT are known to be the three major enzymes involved in the hepatic metabolism of L-serine, but the situation of SHMT appears to be different from those of the latter two enzymes. Because both serine and glycine are physiologically important amino acids that are used in a variety of ways in the cells, their intracellular concentration should be maintained in a given range, and cSHMT and mSHMT together with GCS are thought to play crucial roles in the interconversion between serine and glycine. The equilibrium of the cSHMT-catalyzed reaction appears to lie far on the side of the glycine formation in vivo, and when glycine is to be converted to serine such as in the case of gluconeogenesis from glycine, this conversion may be accomplished mainly by mSHMT in conjugation with GCS, which supplies 5,10-methylene-THF to mSHMT at the expense of another molecule of glycine. The intracellular partitioning of the serine and glycine interconversion in the liver was suggested by the observation by Yoshida and Kikuchi (38) that in a congenital hyperglycinemia patient deficient in GCS, the level of blood serine was in the normal range, whereas those of glycine in the blood and urine were elevated far above the normal. It was also reported that decarboxylation of [1-14C]glycine by liver mitochondrial suspensions or homogenate is accompanied by the formation of nearly an equimolar quantity of [14C]serine (3). Considering a role of GCS to be the disposal of glycine and serine in addition to its role in supplying C1 unit-substituted THF derivatives in mitochondria, the roles of SPT/AGT and SDH as the metabolic exits of serine and glycine are analogous to that of GCS rather than SHMT. Indeed, we observed in experiments with an SDH-depleted reconstituted cytoplasmic extract that the conversion of L-serine to glycine occurred fairly rapidly, in part owing to the low Km of cSHMT for L-serine, followed by the GCS-catalyzed slow decarboxylation of [1-14C]glycine formed.
When the flux of the serine and glycine metabolism through SDH, SPT/AGT, and GCS was compared in rat liver, the flux through SDH was shown to be the largest, contrary to the general understanding that SDH may not play a substantial role because of its very high Km for its substrate. In in vitro experiments, the amount of L-serine metabolized through the SDH pathway, as evidenced by the pyruvate formation with the soluble fraction, far exceeded those in the cases of the SPT/AGT pathway and GCS pathway under every condition used. Under quasi-physiological conditions with 1 mM L-serine and 0.25 mM pyruvate, the contribution of the SDH pathway was estimated to be 89-98% in both 24-h starved and glucagon-treated rat livers (Table III). Calculation of the contribution of individual pathways from the results of in vitro experiments alone could be misleading because of the inevitable deviation from physiological conditions. However, in this study in vivo and perfusion experiments performed with L-[3-3H,14C]serine as the substrate also indicated that gluconeogenesis from L-serine proceeds almost entirely via pyruvate in 48 h-starved rat liver. Even when the hepatic activity of SPT/AGT had been elevated 6-10-fold by glucagon administration, the flux through pyruvate was estimated to account for ~80-90% of the gluconeogenesis (Table IV). It should be mentioned that the results obtained in this study reflect the situation after 24-48 h starvation when the SDH activity has been augmented 2-3-fold (39-41), but because the flux through SDH measured in vitro under the quasi-physiological conditions far exceeded those through SPT/AGT and GCS (Table III), the predominant role of SDH in the disposal of serine in rat liver may be held true for non-starved conditions.
It is also noteworthy that SPT/AGT was shown, in this study, to be actually involved in the metabolism of L-serine in the livers of glucagon-treated rats, although its contribution was rather small. The relative flow of serine through SDH and SPT/AGT in rat liver has been studied mainly by the use of inhibitors of phosphoenolpyruvate carboxykinase such as quinolinate and 3-mercaptopicolinate, and a contribution of the SPT/AGT pathway has been suggested from the observations that these inhibitors had less effect on gluconeogenesis from serine than from lactate or alanine (2, 40-43), although controversial results were also reported (44-46). Our results agree with a study by Snell (47) on gluconeogenesis from serine in the suckling rat in that the contribution of the SPT/AGT-initiated pathway was notable under conditions in which the hepatic SPT/AGT activity increased.
The predominant role of SDH in the metabolism of L-serine reported in this paper does not mean that L-serine is actively metabolized by SDH in rat liver. Aikawa et al. (48, 49) showed that alanine contributes most to hepatic gluconeogenesis from amino acids in starved rats in vivo, and the contribution of serine is far less. Their results are in accordance with the fact that the activity of alanine aminotransferase is six to eight times higher than that of SDH in rat liver, and in addition the Km of SDH for L-serine is as high as 50-70 mM. It appears that L-serine is relatively inert as a substrate for energy metabolism in rat liver.
As for the mechanism by which ATP/Mg2+ stimulates the
decarboxylation of [1-14C]pyruvate in mitochondria, we
assume that when pyruvate is supplied to mitochondria in the presence
of ATP, Mg2+, and HCO3, it is readily
carboxylated to oxaloacetate in addition to its oxidation to
acetyl-CoA. A portion of the oxaloacetate thus formed is converted to
malate by malate dehydrogenase with the concomitant oxidation of NADH
to NAD+, and another portion is converted to citrate by
citrate synthase in conjugation with the release of CoASH. The
NAD+ and CoASH thus formed may then enhance the pyruvate
dehydrogenase activity, allowing the efficient decarboxylation of
pyruvate to acetyl-CoA, which in turn activates carboxylation of
pyruvate to oxaloacetate. In support of this view, Pande and Parvin
(50) observed that the
-cyanocinnamate-sensitive uptake of pyruvate into mitochondria requires concurrent oxidation of pyruvate, and they
also believe that the CoASH and NAD+ present in
mitochondria are able to support the oxidation of pyruvate.
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ACKNOWLEDGEMENTS |
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We thank the Yanaihara Institute (Fujinomiya, Japan) for an anti-SDH antibody also raised in rabbits. We are indebted to Dr. Noburu Yanaihara for help.
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FOOTNOTES |
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* The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
§ Scholarship student of the Heiwa Nakajima Foundation (1995-1996) and the Ito Foundation for International Education Exchange (1997-1998).
§§ To whom correspondence should be addressed: First Department of Biochemistry, Hamamatsu University School of Medicine, 3600 Handa-cho, Hamamatsu, Shizuoka 431-3192, Japan. Tel.: (81)53-435-2322; Fax: (81)53-435-2323.
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ABBREVIATIONS |
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The abbreviations used are: SHMT, serine hydroxymethyltransferase (EC 2.1.2.1); mSHMT, mitochondrial isozyme of serine hydroxymethyltransferase; cSHMT, cytosolic isozyme of serine hydroxymethyltransferase; SDH, L-serine dehydratase (EC 4.2.1.13); SPT/AGT, serine:pyruvate/alanine:glyoxylate aminotransferase (EC 2.6.1.51/EC 2.6.1.44); GCS, glycine cleavage enzyme system (EC 1.4.4.2-1.8.1.4-2.1.2.10); THF, tetrahydrofolate; Mit-Ps, subcellular fraction containing mitochondria and peroxisomes; Tricine, N-[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]glycine.
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REFERENCES |
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