Defining the Topology of Integrin alpha 5beta 1-Fibronectin Interactions Using Inhibitory Anti-alpha 5 and Anti-beta 1 Monoclonal Antibodies
EVIDENCE THAT THE SYNERGY SEQUENCE OF FIBRONECTIN IS RECOGNIZED BY THE AMINO-TERMINAL REPEATS OF THE alpha 5 SUBUNIT*

(Received for publication, March 24, 1997, and in revised form, May 1, 1997)

A. Paul Mould Dagger , Janet A. Askari , Shin-ichi Aota §, Kenneth M. Yamada §, Atsushi Irie , Yoshikazu Takada , Helen J. Mardon par and Martin J. Humphries

From the Wellcome Trust Centre for Cell-Matrix Research, School of Biological Sciences, University of Manchester, Manchester M13 9PT, United Kingdom, the § Craniofacial Developmental Biology and Regeneration Branch, NIDR, National Institutes of Health, Bethesda, Maryland 20892, the  Department of Vascular Biology, Scripps Research Institute, La Jolla, California 92037, and the par  Nuffield Department of Obstetrics and Gynaecology, John Radcliffe Hospital, Headington, Oxford, OX3 9DU, United Kingdom

ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES


ABSTRACT

The high affinity interaction of integrin alpha 5beta 1 with the central cell binding domain (CCBD) of fibronectin requires both the Arg-Gly-Asp (RGD) sequence (in the 10th type III repeat) and a second site (in the adjacent 9th type III repeat) which synergizes with RGD. We have attempted to map the fibronectin binding interface on alpha 5beta 1 using monoclonal antibodies (mAbs) that inhibit ligand recognition. The binding of two anti-alpha 5 mAbs (P1D6 and JBS5) to alpha 5beta 1 was strongly inhibited by a tryptic CCBD fragment of fibronectin (containing both synergy sequence and RGD) but not by GRGDS peptide. Using recombinant wild type and mutated fragments of the CCBD, we show that the synergy region of the 9th type III repeat is involved in blocking the binding of P1D6 and JBS5 to alpha 5beta 1. In contrast, binding of the anti-beta 1 mAb P4C10 to alpha 5beta 1 was inhibited to a similar extent by GRGDS peptide, the tryptic CCBD fragment, or recombinant proteins lacking the synergy region, indicating that the RGD sequence is involved in blocking P4C10 binding. P1D6 inhibited the interaction of a wild type CCBD fragment with alpha 5beta 1 but had no effect on the binding of a mutant fragment that lacked the synergy region. The epitopes of P1D6 and JBS5 mapped to the NH2-terminal repeats of the alpha 5 subunit. Our results indicate that the synergy region is recognized primarily by the alpha 5 subunit (in particular by its NH2-terminal repeats) but that the beta 1 subunit plays the major role in binding of the RGD sequence. These findings provide new insights into the mechanisms, specificity, and topology of integrin-ligand interactions.


INTRODUCTION

Integrins are a large family of alpha beta heterodimeric receptors, many of which play critical roles in cell migration, differentiation, and survival. Integrins recognize a large variety of extracellular and cell surface proteins, and two widespread recognition motifs have been identified within these ligands: Arg-Gly-Asp (RGD) and Leu-Asp-Val (LDV) (1, 2).

The extracellular matrix glycoprotein fibronectin contains a number of domains that mediate its interaction with integrins; the most studied of these domains lies near the center of the fibronectin subunit and is known as the central cell binding domain (CCBD).1 This region contains a number of homologous repeating polypeptide modules termed fibronectin type III repeats, each about 90 amino acid residues in length. An RGD sequence, located in the 10th type III repeat, is a key recognition site for several different integrins, including the prototypic fibronectin receptor alpha 5beta 1. Synthetic peptides containing the RGD sequence completely block cell adhesion to the CCBD (3, 4). However, other data show that additional sequences outside the RGD region are sometimes required for full adhesive activity. In particular, a region of the 9th type III repeat which contains the sequence Pro-His-Ser-Arg-Asn (PHSRN) appears to synergize with RGD for recognition by alpha 5beta 1 (5). Replacement of this sequence with a corresponding sequence from the 8th type III repeat results in a major loss of adhesive activity (5). Similarly, deletion of this region from the CCBD results in ~20-fold loss in activity (6). An overlapping, but distinct, sequence plays a similar role in alpha IIbbeta 3-fibronectin interactions (7). The mode of action of such synergy sequences is not currently understood.

Recently, we described the effect of GRGDS peptide and a tryptic fragment of fibronectin containing the CCBD on the binding of the inhibitory monoclonal antibody (mAb) 13 to alpha 5beta 1 (8). Our results showed that both GRGDS peptide and the CCBD fragment act as allosteric inhibitors of mAb 13 binding to alpha 5beta 1. Our data indicated that mAb 13 recognizes an epitope that is strongly attenuated by ligand occupancy rather than a site directly involved in ligand recognition. We hypothesized that inhibitory mAbs recognize sites attenuated during the conformational adaptation of the integrin to ligand and have termed these ligand-attenuated binding sites (8, 9). Although mAb 13 does not appear to recognize a sequence that interacts directly with ligand, its epitope lies very close to regions of the beta 1 subunit which have been shown to participate in ligand binding (10, 11).

A region of the alpha 5 subunit which plays an important role in fibronectin recognition has been identified by site-directed mutagenesis (12). The NH2-terminal portion of the alpha 5 subunit comprises seven homologous repeats, each of ~60 amino acid residues. Point mutations in a short hydrophobic sequence in the third NH2-terminal repeat block fibronectin binding. The epitope recognized by the inhibitory anti-alpha 5 mAb 16 was found to lie near to this hydrophobic sequence (12). By analogy with our results for mAb 13, these findings suggested to us that fibronectin recognition by alpha 5beta 1 may affect the binding of inhibitory anti-alpha 5 mAbs and furthermore, that it might be possible to use inhibitory mAbs as probes to determine whether the alpha 5 and beta 1 subunits recognize distinct regions of the CCBD.

In this study we tested whether recognition of the CCBD by alpha 5beta 1 perturbs the binding of inhibitory anti-alpha 5 mAbs and if this perturbation is different from that observed for inhibitory anti-beta 1 mAbs. We show that the binding of the anti-alpha 5 mAbs P1D6 and JBS5 to alpha 5beta 1 is inhibited by fibronectin fragments containing both the RGD sequence and the synergy site but is not inhibited by GRGDS peptide or by fibronectin fragments lacking the synergy sequence. In contrast, the binding of the anti-beta 1 mAb P4C10 is inhibited by GRGDS peptide and fibronectin fragments containing the RGD sequence alone. We also present evidence that P1D6 blocks recognition of only the synergy site by alpha 5beta 1. Taken together, our data suggest that the alpha 5 subunit is largely responsible for recognition of the synergy site, whereas the RGD sequence appears to be recognized mainly by beta 1 subunit. Based on an x-ray crystal structure for the CCBD (13), these results allow us to predict a spatial topology for alpha 5beta 1-fibronectin interactions.


EXPERIMENTAL PROCEDURES

Materials

Rat mAbs 11 and 13 recognizing the human alpha 5 and beta 1 integrin subunits, respectively, were produced and purified as described previously (14). Rat anti-mouse beta 1 mAb 9EG7 was a gift from D. Vestweber (Freiburg, Germany); this mAb also cross-reacts with human beta 1. Mouse anti-human beta 1 mAbs P4C10, 4B4, and K20 were purchased from Life Technologies, Inc. (Paisley, Scotland, U. K.), Coulter Corp. (Miami, FL), and The Binding Site (Birmingham, U. K.), respectively. Mouse anti-human alpha 5 mAbs VC5, P1D6, and JBS5 were purchased from Pharmingen (San Diego, CA), Life Technologies, Inc., and Serotec (Oxford, U. K.), respectively. All antibodies were used as purified IgG, except P1D6 and P4C10 (as ascites). A recombinant fragment of fibronectin, H/120, which does not contain the CCBD, was produced and purified as described (15). The synthetic peptides GRGDS and GRDGS were synthesized using Fastmoc chemistry on an Applied Biosystems 431A peptide synthesizer and purified as outlined previously (16).

Proteins

Integrin alpha 5beta 1 was purified from human placenta as described previously (8). An 80-kDa fragment of fibronectin containing the CCBD was purified from a trypsin digest of human plasma fibronectin as described (17). Recombinant fragments of the CCBD were produced as before (5, 18, 19). All recombinant proteins, except proteins comprising the 9th or 10th type III repeats, were purified using DEAE-Sephacel (Pharmacia, Milton Keynes, U. K.) and hydroxylapatite (Bio-Rad, Hemel Hempsted, U. K.) chromatography, essentially as described previously (19). Recombinant proteins comprising the individual 9th and 10th repeats were purified as before (18). All purified proteins solutions were dialyzed against several changes of 150 mM NaCl, 25 mM Tris-Cl, pH 7.4 (buffer A).

Biotinylation of Proteins

Tryptic CCBD fragment of fibronectin or recombinant CCBD fragments (~500 µg/ml in buffer A) were mixed with an equal mass of sulfo-N-hydroxysuccinimido biotin (Pierce, Chester, U. K.) and rotary mixed for 30-40 min at room temperature. The mixture was then dialyzed against several changes of buffer A to remove excess biotin. Dialyzed protein solutions were centrifuged at 13,000 × g for 15 min and stored at 4 °C.

Effect of Ligand on the Binding of mAbs P1D6, JBS5, and P4C10 to alpha 5beta 1

Purified alpha 5beta 1 (at a concentration of ~500 µg/ml) was diluted 1:500 with phosphate-buffered saline containing 1 mM Ca2+ and 0.5 mM Mg2+, and 100-µl aliquots were added to the wells of a 96-well ELISA plate (Dynatech Immulon 3). Plates were incubated overnight at room temperature, and wells were blocked for 1-3 h with 200 µl of 5% (w/v) BSA, 150 mM NaCl, 0.05% (w/v) NaN3, 25 mM Tris-Cl, pH 7.4. Wells were then washed three times with 200 µl of 150 mM NaCl, 1 mM MnCl2, 25 mM Tris-Cl, pH 7.4, containing 1 mg/ml BSA (buffer B). 100-µl aliquots of mAbs (0.3 µg/ml or 1:10,000 dilution of ascites in buffer B) were added to the wells in the presence or absence of varying concentrations of tryptic CCBD fragment or GRGDS peptide. The H/120 fragment of fibronectin and the peptide GRDGS were used as controls. The plate was then incubated at 30 °C for 2 h. Unbound antibody was aspirated, and the wells were washed three times with buffer B. Bound antibody was quantitated by addition of 1:1,000 anti-mouse peroxidase conjugate (Dako A/C, Denmark) in buffer B for 20 min. Wells were then washed four times with buffer B, and color was developed using ABTS substrate (Sigma, Poole, U. K.). Measurements obtained were the mean ± S.D. of four replicate wells.

To test if ligand behaved as a direct competitive inhibitor or an allosteric inhibitor of mAb binding, the inhibition of mAb binding at different concentrations of tryptic CCBD fragment was measured as described above for 10-fold different concentrations of mAb (0.3 and 3 µg/ml or 1:10,000 and 1:1,000 dilution of ascites). The concentration of ligand required to inhibit antibody binding half-maximally and the maximal extent of inhibition were estimated by nonlinear regression analysis as described previously (8).

Solid Phase Assays

Solid phase ligand-receptor binding was performed essentially as described previously (20). ELISA plate wells were coated with alpha 5beta 1, blocked as described above, and washed three times with 200 µl of buffer B. In experiments examining the ability of recombinant proteins and GRGDS peptide to inhibit competitively the binding of the tryptic CCBD fragment to alpha 5beta 1, 100-µl aliquots of biotinylated tryptic CCBD fragment (0.1 µg/ml) in buffer B were added to the wells, with or without varying concentrations of competing peptide or proteins. The plate was then incubated at 30 °C for 3 h. Biotinylated ligand was aspirated, and the wells were washed three times with buffer B. Bound ligand was quantitated by the addition of 1:200 ExtrAvidin-peroxidase conjugate (Sigma) in buffer B for 10 min. Wells were then washed four times with buffer B, and color was developed using ABTS. Measurements obtained were the mean ± S.D. of four replicate wells. To estimate the concentrations of peptide or proteins required for half-maximal inhibition of CCBD fragment binding, nonlinear regression analysis of the data was performed as described previously (15).

In experiments examining the direct binding of biotinylated recombinant CCBD fragments to alpha 5beta 1, ELISA plate wells were coated with alpha 5beta 1, blocked, and washed as described above. 100-µl aliquots of biotinylated proteins (0.05-30 µg/ml) diluted in buffer B were added to the wells, and the plate was then incubated at 30 °C for 3 h. Bound ligand was then quantitated as described above. To estimate apparent KD values, nonlinear regression analysis of the data was performed (15). For experiments examining the effect of anti-alpha 5 and anti-beta 1 mAbs on the binding of biotinylated recombinant CCBD fragments to alpha 5beta 1, assays were performed in the presence of 10 µg/ml purified mAbs or 1:500 dilution of ascites.

In all of the assays described above, the amount of nonspecific binding was measured by determining the level of antibody or ligand binding to wells coated with BSA alone; these values were subtracted from the corresponding values for receptor-coated wells. Each experiment shown is representative of at least three separate experiments. Under the conditions used in these assays, the ELISA signal appeared to be directly proportional to the amount of bound antibody or ligand because plots of 1/absorbance versus 1/(free antibody or ligand) did not deviate from linearity at high concentrations. Note, however, that binding constants cannot be determined precisely in these assays and that only apparent KD values are quoted.

Flow Cytometric Analysis

K562 erythroleukemia cells were grown in RPMI 1640 medium containing 10% (v/v) fetal calf serum, as described previously (24). Cells were washed with 150 mM NaCl, 25 mM HEPES, pH 7.4, incubated at 37 °C for 15 min in 150 mM NaCl, 25 HEPES, 2 mM EDTA, pH 7.4, washed twice in 150 mM NaCl, 1 mM MnCl2, 25 mM HEPES, pH 7.4, containing 1 mg/ml BSA (buffer C), and resuspended in buffer C to a concentration of 1 × 107/ml. Aliquots of buffer C (50 µl) containing 2 × the final concentration of mAbs (1:1,000 diution of P1D6, 0.6 µg/ml JBS5, and 1:5,000 dilution of P4C10) and 2 × the final concentration of CCBD fragment (50 µg/ml) or GRGDS peptide (200 µg/ml) were added to 50-µl aliquots of cells. Samples were then incubated at room temperature for 1 h. Cells were washed three times in buffer C, and 50 µl of fluorescein isothiocyanate-conjugated F(ab')2 anti-mouse Fc secondary antibody (Serotec) diluted 1:200 in buffer C with 1% (v/v) normal human serum was added to each sample, and the samples were incubated at room temperature for a further 30 min. (The secondary antibody conjugate does not cross-react with rat mAbs.) Cells were then washed twice in buffer C, once in phosphate-buffered saline, and fixed in phosphate-buffered saline containing 0.2% (w/v) formaldehyde. 20,000 cells were analyzed from each sample using a FACscan flow cytometer (Becton Dickinson, Cowley, Oxford, U. K.), and mean fluorescence intensity values were calculated. In repeated measurements, standard errors were <5% of the mean fluoresence intensity values.

To estimate the amount of nonspecific fluoresence, the level of binding of an irrelevant mouse mAb 9E10 (anti-myc tag) to K562 cells was measured under the same conditions.

Cell Attachment Assay

K562 cells were washed with 150 mM NaCl, 25 mM HEPES, pH 7.4, incubated at 37 °C for 30 min in the same buffer, and resuspended in buffer C to a concentration of 1 × 106/ml. Assays were performed in 96-well microtiter plates (Costar, High Wycombe, U. K.). Wells were coated for 60 min at room temperature with 100-µl aliquots of recombinant proteins (0.2-100 µg/ml) diluted with Dulbecco's phosphate-buffered saline, and then sites on the plastic for nonspecific cell adhesion were blocked for 40-60 min at 37 °C with 100 µl of 10 mg/ml heat-denatured BSA. The BSA was removed by aspiration, and the wells were then washed once with buffer C. Aliquots of the cells (100 µl) in buffer C were then added to the wells and incubated for 20 min at 37 °C in a humidified atmosphere of 5% (v/v) CO2. For experiments examining the effect of anti-alpha 5 and anti-beta 1 mAbs on cell attachment, cells were preincubated with mAbs (10 µg/ml or 1:500 dilution of ascites) for 30 min at room temperature before being added to the wells. To estimate the reference value for 100% attachment, cells in quadruplicate wells coated with poly-L-lysine (500 µg/ml) were fixed immediately by direct addition of 100 µl of 5% (w/v) glutaraldehyde for 30 min at room temperature. Loosely adherent or unbound cells from experimental wells were removed by aspiration, the wells washed once with 100 µl of buffer C, and the remaining bound cells were fixed as described above for reference wells. The fixative was aspirated, the wells were washed three times with 200 µl of H2O, and attached cells were stained with Crystal Violet (Sigma) as described previously (20). The absorbance of each well at 570 nm was then measured using a multiscan ELISA reader (Dynatech, Billingshurst, U. K.). Each sample was assayed in quadruplicate, and attachment to BSA (<3% of the total) was subtracted from all measurements.

Epitope Mapping

Wild type human alpha 5 cDNA was subcloned into the pBJ-1 vector. Putative surface loops in the NH2-terminal repeats of alpha 5 were swapped with the corresponding loops in the human alpha 4 sequence. The positions of the swapping mutations are residues 41-48 in repeat 1 (R1), 116-134 in repeat 2 (R2), 179-191 in repeat 3 (R3), 252-259 in repeat 4 (R4), 308-321 in repeat 5 (R5), and 375-380 in repeat 6 (R6). The expression vector of each mutant was constructed using the overlap extension polymerase chain reaction (21). The presence of the mutation was verified by DNA sequencing. Twenty µg of wild type or mutant alpha 5 cDNA construct was transfected into Chinese hamster ovary-B2 cells (22) (8 × 106 cells), together with 1 µg of pFneo DNA containing a neomycin resistance gene, by electroporation. Transfected cells were maintained in Dulbecco's modified Eagle's medium supplemented with 10% fetal calf serum at 37 °C in 6% CO2 for 2 days. Then the cells were transferred to the same medium containing 700 µg/ml G418 (Life Technologies, Inc.). After 10-14 days, G418-resistant colonies were harvested. The expression level of wild type and mutant alpha 5 was confirmed by flow cytometric analysis in FACScan with VC5, a mAb that recognizes a nonfunctional epitope on the alpha 5 subunit. Chinese hamster ovary cells expressing mutant alpha 5 were then cloned to obtain cells expressing high levels of mutant alpha 5 by cell sorting in FACStar (Becton Dickinson). The cloned cells expressed mutant alpha 5 at levels comparable to that of cells expressing wild type alpha 5. Characteristics of these cells will be described in more detail elsewhere.2 To localize the epitopes for P1D6, JBS5, and mAb 11, the reactivity of the wild type and mutant alpha 5-expressing cells with these mAbs was examined by flow cytometry in FACScan.


RESULTS

A Tryptic CCBD Fragment of Fibronectin, but Not GRGDS Peptide, Inhibits the Binding of Anti-alpha 5 mAbs P1D6 and JBS5 to alpha 5beta 1

We showed previously that the binding of the inhibitory anti-beta 1 mAb 13 to alpha 5beta 1 was perturbed by both GRGDS synthetic peptide and a tryptic CCBD fragment (8). We therefore investigated whether the binding of two inhibitory anti-alpha 5 mAbs to alpha 5beta 1 was affected by these ligands. The results (Fig. 1, A and B) showed that the binding of P1D6 and JBS5 was not inhibited by GRGDS peptide; in fact, we reproducibly observed a slight stimulation (1.2-1.4-fold) of P1D6 binding to alpha 5beta 1 by GRGDS peptide. However, binding of both P1D6 and JBS5 was strongly attenuated by the CCBD fragment. In correspondence with our previous results for mAb 13 (8), binding of the inhibitory anti-beta 1 mAb P4C10 to alpha 5beta 1 was partially blocked by both GRGDS peptide and the CCBD fragment (Fig. 1C).


Fig. 1. Effect of GRGDS peptide and tryptic CCBD fragment of fibronectin on the binding of mAbs P1D6, JBS5, and P4C10 to alpha 5beta 1. Results shown are for purified alpha 5beta 1 (panels A-C) or for alpha 5beta 1 on K562 cells (panel D). Binding of P1D6 (panel A), JBS5 (panel B), or P4C10 (panel C) to purified alpha 5beta 1 was measured for a range of concentrations of CCBD fragment (bullet ) or GRGDS peptide (black-square). In a separate experiment the binding of these antibodies was unaffected by the control peptide GRDGS or the control fibronectin fragment H/120 (15) (data not shown). Binding of the antibodies to K562 cells (panel D) was measured by flow cytometry in the presence of the activating rat anti-human beta 1 mAb 9EG7, without ligand (open bars) or with 100 µg/ml GRGDS peptide (hatched bars) or with 25 µg/ml tryptic CCBD fragment (filled bars). P1D6, JBS5, and P4C10 binding was detected using a mouse-specific fluorescein isothiocyanate conjugate. The dashed line indicates the level of fluorescence in the presence of an irrelevant mouse mAb. Results are of one experiment, representative of three separate experiments.
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In control experiments (not shown) the binding of the noninhibitory anti-alpha 5 mAb 11 and the noninhibitory anti-beta 1 mAb K20 to alpha 5beta 1 was not affected by either GRGDS peptide or the CCBD fragment. We used 1 mM Mn2+ in all the above experiments because ligand recognition by alpha 5beta 1 is optimal under these conditions (20). The binding of P1D6, JBS5, and P4C10 to alpha 5beta 1 was not influenced by GRGDS peptide or CCBD fragment when Mn2+ in the assay buffer was replaced with 1 mM EDTA (data not shown), i.e. conditions under which ligand recognition does not occur (20). These findings strongly suggest that the altered binding of P1D6, JBS5, and P4C10 seen in the above experiments (Fig. 1, A-C) is a consequence of ligand recognition by alpha 5beta 1.

GRGDS peptide was also ineffective at blocking the binding of P1D6 and JBS5 to alpha 5beta 1 on K562 cells (Fig. 1D), whereas the CCBD fragment was strongly inhibitory. In contrast, P4C10 binding was attenuated by both GRGDS peptide and the CCBD fragment. (These experiments were performed in the presence of the activating anti-beta 1 mAb 9EG7 because GRGDS peptide recognition by alpha 5beta 1 on K562 cells does not occur unless the integrin is stimulated using activating mAbs (8).)

The CCBD Fragment Acts Predominantly as an Allosteric Inhibitor of mAb Binding to alpha 5beta 1

To examine if the tryptic CCBD fragment acts as a direct competitive inhibitor or as an allosteric inhibitor of P1D6, JBS5, and P4C10 binding to alpha 5beta 1, we examined the inhibitory effect of the CCBD fragment at 10-fold different mAb concentrations. The results showed that the concentration of CCBD fragment required for half-maximal inhibition of P1D6 (Fig. 2A) and P4C10 (Fig. 2C) binding was not significantly different over this range of antibody concentrations. However, the concentration of CCBD fragment required for half-maximal inhibition of JBS5 (Fig. 2B) binding to alpha 5beta 1 was increased approximately 4-fold. For all the mAbs, the maximal extent of inhibition decreased with increasing antibody concentration. If ligand behaved as a direct competitive inhibitor of mAb binding, the concentration of ligand for half-maximal inhibition of antibody binding should increase in parallel with the antibody concentration, and the maximal extent of inhibition should be unchanged. For P1D6 and P4C10, the results are instead consistent with an allosteric inhibition, in which ligand does not compete directly with mAb for binding to alpha 5beta 1 but instead binds to a separate site and decreases the affinity of mAb binding by an allosteric effect on the conformation of the integrin. However, for JBS5 the inhibition is not purely allosteric in nature; the increased concentration of ligand for half-maximal inhibition of antibody binding with increased mAb concentration indicates that some direct competitive inhibition may also be involved. For each mAb, plots of 1/(antibody binding) versus ligand concentration were hyperbolic (not shown), which is diagnostic of a mainly allosteric type of inhibition (23). Hence, as observed for mAb 13 (8), P1D6, JBS5, and P4C10 appear to recognize sites on alpha 5beta 1 which are attenuated as a consequence of ligand occupancy.


Fig. 2. Effect of mAb concentration on the inhibition of P1D6, JBS5, and P4C10 binding to alpha 5beta 1 by the tryptic CCBD fragment. Binding of P1D6 (panel A), JBS5 (panel B), or P4C10 (panel C) to purified alpha 5beta 1 was measured for a range of concentrations of CCBD fragment at 10-fold different mAb concentrations: bullet , 1:1,000 dilution and black-square, 1:10,000 dilution in panels A and C; bullet , 3 µg/ml and black-square, 0.3 µg/ml in panel B. By nonlinear regression analysis, the concentrations of CCBD fragment required for half-maximal inhibition of P1D6 binding are 2.1 ± 0.6 and 1.2 ± 0.3 µg/ml for 1:1,000 and 1:10,000 dilutions, respectively; the maximal extents of inhibition are estimated to be 57 and 76%, respectively. The concentrations of CCBD fragment for half-maximal inhibition of JBS5 binding are estimated to be 5.5 ± 0.8 and 1.5 ± 0.4 µg/ml for 3 and 0.3 µg/ml, respectively; the maximal extents of inhibition are estimated to be 62 and 77%, respectively. The concentrations of CCBD fragment required for half-maximal inhibition of P4C10 binding are estimated to be 1.7 ± 0.5 and 1.8 ± 0.5 µg/ml for 1:1,000 and 1:10,000 dilutions, respectively; the maximal extents of inhibition are estimated to be 39 and 48%, respectively.
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The Region of the CCBD Responsible for Perturbing the Binding of the Anti-alpha 5 mAbs to alpha 5beta 1 Lies Outside the 10th Type III Repeat

The above results show that the binding of P1D6 and JBS5 to alpha 5beta 1 is decreased markedly when the CCBD of fibronectin is recognized by alpha 5beta 1. However, recognition of the RGD sequence alone does not decrease the affinity of P1D6 and JBS5 binding. To narrow down which region of the CCBD is involved in blocking P1D6 and JBS5 binding, recombinant wild type and mutant fragments from the CCBD were produced (Fig. 3). Initially, the activity of these fragments was assessed by testing their ability to inhibit competitively the binding of the tryptic CCBD fragment to alpha 5beta 1 in a solid phase assay (Fig. 3). In close agreement with a previous study using intact cells (5), mutation of the synergy region led to a 50-200-fold loss of activity in this assay. However, when used at sufficiently high concentrations, such fragments did fully inhibit tryptic CCBD fragment binding. In contrast, fragments lacking the RGD sequence had little or no activity. Since the synergy region and the RGD sequence lie in the 9th and 10th type III repeats, respectively, we first tested whether these repeats were involved in blocking P1D6 and JBS5 binding to alpha 5beta 1. The results (Fig. 4, A and B) showed that a recombinant protein comprising only the 10th type III repeat (III10) did not perturb P1D6 and JBS5 binding; however, a recombinant protein containing the 9th and 10th type III repeats (III9-10) strongly inhibited the binding of these mAbs. In contrast, binding of P4C10 to alpha 5beta 1 was inhibited by both III10 and III9-10 (Fig. 4C). A recombinant protein comprising only the 9th type III repeat (III9) had no effect on the binding of any of the mAbs to alpha 5beta 1. A mixture of III9 and III10 also failed to perturb P1D6 and JBS5 binding (data not shown). These results indicate that the region of the CCBD responsible for blocking P1D6 and JBS5 binding lies in the 9th type III repeat; however, the activity of this region is only observed when the 10th type III repeat is also present in the same protein. In contrast, consistent with the effect of GRGDS peptide on P4C10 binding to alpha 5beta 1, the region of the CCBD responsible for blocking the binding of this mAb appears to lie mainly within the RGD-containing 10th type III repeat.


Fig. 3. Recombinant fragments of the CCBD of fibronectin and their inhibitory activities in a solid phase assay. The various recombinant proteins shown were constructed and assayed for their ability to inhibit competitively the binding of biotinylated tryptic CCBD fragment to alpha 5beta 1. Amino acid residues from the 8th type III repeat are indicated by gray boxes. The III9-10SPSDN protein has the PHSRN sequence in the 9th type III repeat substituted with the corresponding sequence SPSDN from the 8th type III repeat. The III6-10(SPSDN) protein has 16 amino acid residues in the 9th type III repeat (including the PHSRN sequence) substituted with residues from the 8th type III repeat. The III6-10KGE protein has the RGD sequence in the 10th type III repeat mutated to KGE. The concentrations of proteins required for 50% inhibition of tryptic CCBD fragment binding are shown relative to the molar activity of GRGDS synthetic peptide (IC50 of GRGDS peptide/IC50 of the protein). N.I. (no inhibition detected) indicates that no inhibitory activity whatsoever was detected at the highest concentration used. The III6-10KGE protein was slightly inhibitory, but the level of inhibition was less than 50% at the highest concentration used. IC50 of GRGDS peptide was approximately 0.24 µM in this assay.
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Fig. 4. Effect of the 9th and 10th type III repeats of fibronectin on the binding of mAbs P1D6, JBS5, and P4C10 to alpha 5beta 1. Binding of P1D6 (panel A), JBS5 (panel B), or P4C10 (panel C) to purified alpha 5beta 1 was measured for a range of concentrations of III9 (black-triangle), III10 (black-square), or III9-10 (bullet ). The III9 protein could not be used at concentrations above 30 µg/ml because it was poorly soluble under the assay conditions.
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The PHSRN Site in the 9th Type III Repeat Is Involved in Perturbing the Binding of the Anti-alpha 5 mAbs to alpha 5beta 1

To define further the region of the CCBD involved in blocking P1D6 and JBS5 binding, we examined the effect of mutations in the 9th type III repeat on the capacity of the III9-10 protein to block P1D6 and JBS5 binding. The results (Fig. 5, A and B) showed that replacement of the synergy sequence region (PHSRN) in the 9th type III repeat with an inactive sequence (SPSDN) from the 8th type III repeat resulted in a marked loss of activity for perturbing P1D6 and JBS5 binding. Replacement of the entire 9th type III repeat with the 8th caused a further loss of activity. In contrast, mutations in the 9th type III repeat had little effect on the ability of the recombinant proteins to inhibit P4C10 binding (Fig. 5C) (although in agreement with the lower affinity of binding of the mutant proteins to alpha 5beta 1, much higher concentrations of the mutant proteins were required to inhibit P4C10 binding maximally compared with the wild type III9-10 protein). These data indicate that the synergy region of the 9th type III repeat (particularly the PHSRN sequence) is required for blocking P1D6 and JBS5 binding to alpha 5beta 1; however, this region plays little or no role in blocking P4C10 binding.


Fig. 5. Effect of mutations in the 9th type III repeat on P1D6, JBS5, and P4C10 binding to alpha 5beta 1. Binding of P1D6 (panel A), JBS5 (panel B), or P4C10 (panel C) to purified alpha 5beta 1 was measured for a range of concentrations of wild type III9-10 (bullet ), III9-10SPSDN (black-square), or III8,10 (black-triangle).
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Binding of a CCBD Fragment Lacking the Synergy Site to alpha 5beta 1 Is Not Blocked by the Anti-alpha 5 mAb P1D6

Since binding of the synergy region of the 9th type III repeat to alpha 5beta 1, but not the RGD sequence of the 10th type III repeat, causes attenuation of the epitopes recognized by P1D6 and JBS5, we hypothesized that the binding of these mAbs to alpha 5beta 1 should inhibit recognition of the synergy sequence but not the RGD sequence. To test this hypothesis we produced recombinant fragments of the CCBD containing wild type and mutant versions of type III repeats 6-10. The use of these longer fragments of the CCBD allowed us to compare results in solid phase and cell attachment assays. The wild type protein (III6-10) bound with high affinity to alpha 5beta 1 in solid phase assays. In correspondence with the results shown in Fig. 3, a mutant protein in which 16 amino acid residues in the synergy region of the 9th type III repeat were replaced with corresponding sequence from the 8th type III repeat (III6-10(SPSDN)) also bound to alpha 5beta 1, but with >100-fold lower apparent affinity than the wild type protein. A second mutant protein in which the RGD sequence in the 10th type III repeat was mutated to KGE (III6-10KGE) bound very poorly to alpha 5beta 1 (Fig. 6A). None of the proteins bound to alpha 5beta 1 in the presence of EDTA (data not shown). Parallel results were obtained in K562 cell attachment assays (Fig. 6B).


Fig. 6. Panel A, binding of III6-10 proteins to alpha 5beta 1 in a solid phase assay. Binding of biotinylated wild type III6-10 (bullet ), III6-10(SPSDN) (black-square), or III6-10KGE (black-triangle) was measured for a range of concentrations of each recombinant protein. By nonlinear regression analysis, the apparent affinity of wild type III6-10 binding to alpha 5beta 1 is 1.1 ± 0.2 nM; the apparent affinity of III6-10(SPSDN) binding is 160 ± 20 nM. Panel B, attachment of K562 cells to III6-10 proteins. Cell attachment to wild type III6-10 (bullet ), III6-10(SPSDN) (black-square), or III6-10KGE (black-triangle) was measured for a range of coating concentrations of each recombinant protein. The maximal levels of binding to wild type III6-10 and III6-10(SPSDN) correspond to approximately 98 and 50% cell attachment, respectively.
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The effects of inhibitory anti-alpha 5 and anti-beta 1 mAbs on III6-10 and III6-10(SPSDN) binding to alpha 5beta 1 were then tested (Fig. 7A), using concentrations of these proteins which gave similar levels of binding in the absence of mAbs. The results showed that, as predicted, P1D6 inhibited binding of III6-10 but not III6-10(SPSDN) to alpha 5beta 1. However, JBS5 inhibited both III6-10 and III6-10(SPSDN) binding. All of the inhibitory anti-beta 1 mAbs tested (P4C10, 13, and 4B4) blocked both III6-10 and III6-10(SPSDN) binding. There was no inhibition of either III6-10 or III6-10(SPSDN) binding by control anti-alpha 5 or anti-beta 1 mAbs. Again, parallel results were obtained in cell attachment assays (Fig. 7B). Taken together, these data show that P1D6 inhibits recognition of the synergy region but not the RGD sequence by alpha 5beta 1. However, it appears that JBS5 does affect binding of the RGD sequence to alpha 5beta 1.


Fig. 7. Panel A, effect of anti-alpha 5 and -beta 1 mAbs on the binding of wild type III6-10 (0.05 µg/ml) (open bars) and III6-10(SPSDN) (10 µg/ml) (filled bars) to purified alpha 5beta 1. Results are expressed as a percentage of recombinant protein binding to alpha 5beta 1 in the absence of mAbs. Panel B, effect of anti-alpha 5 and -beta 1 mAbs on the attachment of K562 cells to wild type III6-10 (0.2 µg/ml) (open bars) or III6-10(SPSDN) (50 µg/ml) (filled bars). Results are expressed as a percentage of cell attachment to the recombinant proteins in the absence of mAbs. The noninhibitory anti-beta 1 mAb K20 did not affect binding of wild type III6-10 or III6-10(SPSDN) to purified alpha 5beta 1 (108 ± 12% and 96 ± 1% of control values, respectively), or attachment of K562 cells to wild type III6-10 or III6-10(SPSDN) (94 ± 4% and 106 ± 4% of control values, respectively).
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Epitopes of P1D6 and JBS5 Lie within the NH2-terminal Repeats of the alpha 5 Subunit

For the integrin alpha 4beta 1 it has been shown that the epitopes of inhibitory anti-alpha 4 mAbs map to sites mainly within the third NH2-terminal repeat (24, 25) and are probably close to, or within, predicted loop structures (12, 26, 27). To localize the epitopes of P1D6 and JBS5, putative loop regions within the NH2-terminal repeats of the alpha 5 subunit were swapped with the corresponding loops from the alpha 4 subunit. Mutant alpha 5 subunits (which formed heterodimers with endogenous hamster beta 1) were expressed on the surface of Chinese hamster ovary-B2 cells and tested for their ability to bind P1D6 and JBS5 using flow cytometric analysis. The results (Table I) showed that swapping of loops in the NH2-terminal repeats, particularly in repeats 2 and 3, perturbs P1D6 and JBS5 binding. Hence it appears that the epitopes of these mAbs comprise several noncontiguous residues in these repeats. Binding of the noninhibitory anti-alpha 5 mAb 11 to alpha 5beta 1 was not affected by any of the loop swaps, suggesting that its epitope lies outside the NH2-terminal repeats. The epitopes of the inhibitory anti-beta 1 mAbs used in this study (P4C10, 13, and 4B4) have been shown previously to map to a region of the beta 1 subunit which contains amino acid residues 207-218 (10).

Table I. Reactivity of anti-alpha 5 mAbs to wild type and mutant alpha 5beta 1

Mutant human alpha 5 subunits were constructed by swapping putative loop regions in NH2-terminal repeats 1-6 (R1-R6) with the corresponding loops from the human alpha 4 subunit. The wild type (wt) and mutant human alpha 5 subunits were clonally expressed on the B2 variant of Chinese hamster ovary cells, and the reactivity of the anti-alpha 5 mAbs to the cells was examined by flow cytometry. The numbers in the table represent the percentage of positive cells in a typical experiment. /+ represents positive reactivity of the cells to the mAb.
mAb B2 cells wt alpha 5 Mutant
R1 R2 R3 R4 R5 R6

Control 1.0 2.0 5.7 8.1 4.6 2.8 1.9 2.2
mu IgG
mAb 11 0.5 97.8/+ 88.9/+ 83.0/+ 85.1/+ 93.9/+ 89.6/+ 86.7/+
P1D6 0.5 97.8/+ 53.9/+ 3.8 4.7 76.1/+ 91.1/+ 91.4/+
JBS5 0.8 96.3/+ 29.0/+ 5.8 4.4 45.8/+ 66.5/+ 81.1/+


DISCUSSION

The NH2-terminal portions of both integrin alpha  and beta  subunits appear to cooperate in ligand recognition; however, it is not yet understood how this cooperativity arises, how specificity is generated, and whether the alpha  and beta  subunits recognize the same or distinct sequences in the ligand. The prototypical interaction of alpha 5beta 1 with the CCBD of fibronectin studied here allows us to begin to address these questions.

The main findings of this report are as follows. (i) Binding of the anti-alpha 5 mAbs P1D6 and JBS5 to alpha 5beta 1 is strongly inhibited by CCBD fragments containing both synergy and RGD sequences, but not by GRGDS peptide or CCBD fragments containing only the RGD site. In contrast, binding of the anti-beta 1 mAb P4C10 to alpha 5beta 1 is inhibited to a similar extent by GRGDS peptide, CCBD fragments containing both synergy and RGD sequences, or CCBD fragments containing only the RGD site. (ii) P1D6 inhibits the interaction of a wild type recombinant CCBD fragment with alpha 5beta 1 but has no effect on the binding of a mutant CCBD fragment that lacks the synergy sequence. In contrast, the binding of both wild type and mutant fragments to alpha 5beta 1 is inhibited by P4C10 (and by other anti-beta 1 mAbs). (iii) The epitopes of P1D6 and JBS5 lie in the NH2-terminal repeats of the alpha 5 subunit. Taken together, our results indicate that the synergy region is recognized primarily by the alpha 5 subunit (in particular by its NH2-terminal repeats) but that the beta 1 subunit plays the major role in binding of the RGD sequence.

Although our data suggested that ligand acted mainly as an allosteric inhibitor of antibody binding, we believe that this should not be taken as evidence that these antibodies recognize epitopes that are spatially distant from the ligand binding sites. Inhibitory mAbs probably recognize sites proximal to the ligand binding domains because they lie in the same regions of the subunits implicated by other techniques (such as cross-linking and site-directed mutagenesis) as containing ligand binding sequences (9). Our epitope mapping results indicate that the epitopes of JBS5 and P1D6 include a putative beta -turn sequence in the third NH2-terminal repeat of alpha 5, a region that has previously been shown to pay a role in fibronectin recognition (12). These findings are consistent with the concept that inhibitory mAb epitopes are at sites that are attenuated as a result of the conformational changes that take place in the integrin upon ligand recognition and that these changes take place close to the ligand binding sites. Furthermore, our results suggested that the inhibition of JBS5 binding to alpha 5beta 1 by ligand was not purely allosteric but also involved a direct competition; hence the epitope recognized by this mAb appears to be partly overlapping with the ligand binding pocket.

P1D6 only inhibited binding of the wild type CCBD fragment that contained both synergy sequence and RGD to alpha 5beta 1 but had no effect on the binding of a mutant fragment lacking the synergy site but retaining the RGD sequence. These results imply that P1D6 only blocks recognition of the synergy sequence by alpha 5beta 1. A similar conclusion was reached in a study examining the effect of P1D6 on epithelial cell adhesion to mutant fibronectin fragments (28). In contrast, however, we found that the other anti-alpha 5 mAb used in this study (JBS5) inhibited binding of both wild type and mutant CCBD fragments to alpha 5beta 1. Since not all beta 1 integrins recognize RGD sequences, it is likely that the alpha 5 subunit plays some role in RGD binding, and thus it is possible that the JBS5 epitope may be spatially close to a region of the alpha 5 subunit involved in recognition of RGD. In agreement with this suggestion, mutations in the third NH2-terminal repeat of the alpha IIb subunit blocked binding of mAbs containing an RGD-type motif to alpha IIbbeta 3 (29). Alternatively, as seen with the anti-beta 1 mAb 13 (8), JBS5 may induce a conformational change in alpha 5beta 1 which precludes binding of the RGD sequence. All of the inhibitory anti-beta 1 mAbs tested blocked the binding of both wild type and mutant fragments, as would be predicted if they allosterically affect an RGD-binding region of the beta 1 subunit. Our proposal that the beta 1 subunit contains the main site involved in RGD recognition is consistent with studies examining the cross-linking of RGD-containing peptides to alpha IIbbeta 3 and alpha Vbeta 3, which showed that the beta 3 subunit contained the major site of cross-linking (30, 31). A possible RGD binding motif in integrin beta  subunits has recently been identified from a phage display library (32).

Our observation that the 9th type III repeat appears unable to bind to alpha 5beta 1 in the absence of the 10th type III repeat is consistent with a previous report showing that the 9th repeat alone cannot support alpha 5beta 1-mediated cell attachment (18). It has also been shown previously that a peptide containing the PHSRN sequence is unable to inhibit alpha 5beta 1-mediated cell adhesion to fibronectin; however, when the same peptide was positioned via a covalent bond in the corresponding site of the normally inactive 8th type III repeat in a recombinant fragment containing the 8th and 10th repeats, adhesive activity was partially restored (5). Hence it was proposed that the PHSRN sequence may need to be located a specific distance from the RGD sequence to be recognized by alpha 5beta 1. Our data suggest an explanation for this observation, i.e. the recognition site for the PHSRN sequence on the alpha 5 subunit is positioned a specific distance from the RGD recognition site on the beta 1 subunit. The synergistic activity of the PHSRN site can also be readily explained if it provides a second (weaker) site for integrin recognition. alpha 5beta 1 recognizes fibronectin with high affinity but binds only poorly, or not at all, to other extracellular matrix proteins containing an RGD sequence. The interaction of alpha 5beta 1 with the synergy region provides a mechanism for achieving higher affinity and higher fidelity binding that could be conferred by the RGD site alone. By analogy, the binding of an RGD/LDV site in an integrin ligand to the beta  subunit and the binding of a second (synergistic) sequence to the alpha  subunit may constitute a widespread paradigm for generating specificity of integrin-ligand interactions.

The x-ray crystal structure of a recombinant protein spanning type III repeats 7-10 of the CCBD revealed that the synergy sequence and the RGD site are located on the same face of the fibronectin molecule, separated by 3-4 nm (13). Since the large globular head of an integrin (about 12 nm across) can easily span this distance, it is possible that an integrin could interact simultaneously with both sites. Based on the structure of the CCBD (13), the recognition site for the PHSRN sequence on the alpha 5 subunit is probably positioned 3-4 nm away from the RGD binding site on the beta 1 subunit. The NH2-terminal repeats of integrin alpha subunits have recently been proposed to form a beta -propeller structure in which the sequences implicated in ligand recognition are within loops on the upper surface of the propeller (27). The NH2-terminal portion of integrin beta  subunits has been proposed to contain a region with an A-domain-like fold (11, 33-35), with the ligand binding site on the top face of this domain. Since the synergy site and the RGD sequence lie on the same side of the fibronectin molecule, our results imply that the top surface of the alpha  subunit beta -propeller and the top face of the beta  subunit A-domain must be approximately coplanar in the ligand-occupied state of alpha 5beta 1. This arrangement would also place sites involved in ligand binding and the epitopes of inhibitory mAbs near the alpha  subunit/beta subunit interface, as proposed in models of integrin activation (9, 36, 37).


FOOTNOTES

*   These studies were supported by grants from the Wellcome Trust (to M. J. H.) and by Grants GM47157 and GM49899 from the National Institutes of Health (to Y. T.).The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Dagger    To whom correspondence should be addressed: Wellcome Trust Centre for Cell-Matrix Research, School of Biological Sciences, University of Manchester, 2.205 Stopford Bldg, Oxford Rd., Manchester, M13 9PT, U. K. Tel.: 44-161-275-5649; Fax: 44-161-275-5082; E-mail: pmould{at}fs1.scg.man.ac.uk.
1   The abbreviations used are: CCBD, central cell binding domain of fibronectin; mAb(s), monoclonal antibody; ELISA, enzyme-linked immunosorbent assay; BSA, bovine serum albumin; ABTS, 2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid).
2   A. Irie, T. Kamata, and Y. Takada, manuscript in preparation.

ACKNOWLEDGEMENTS

We thank J. Aplin for providing human placenta, and D. Vestweber for supplying mAb 9EG7. We are grateful to D. S. Tuckwell, P. Newham, R. C. Liddington, and A. G. Lowe for helpful discussions.


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