(Received for publication, April 15, 1996, and in revised form, October 30, 1996)
From the Department of Biochemistry, The Albert Einstein College of Medicine of Yeshiva University, Bronx, New York 10461
Tyrosine-specific protein kinases are known to utilize short synthetic tyrosine-containing peptides as substrates and, as a consequence, a number of inhibitory peptides have been prepared by replacing the tyrosine moiety in these peptides with a nonphosphorylatable phenylalanine residue. Unfortunately, the inhibitory efficacy of these phenylalanine-based peptides is often disappointing. These results demonstrate the need for nonphosphorylatable tyrosine surrogates that enhance enzyme affinity. As a consequence, we prepared nearly two dozen different phenethylamine derivatives, attached them to the C terminus of an active site-directed peptide (Glu-Glu-Leu-Leu), and examined their effectiveness as inhibitors of pp60c-src. Three derivatives exhibit enhanced inhibitory activity (relative to phenethylamine), including para-substituted sulfonamide and guanidino analogs as well as a pentafluoro-containing species. The para-sulfonamide derivative was selected for further study and was found to function as a competitive inhibitor versus variable peptide substrate and as a noncompetitive inhibitor versus variable ATP. In short, the enhanced inhibitory activity of the sulfonamide derivative is not due to the association of this moiety with the ATP binding site. Furthermore, peptides containing the para-guanidino and pentafluoro derivatives of phenylalanine were prepared. These species also display enhanced inhibitory activity toward pp60c-src relative to the corresponding phenylalanine-based peptide.
More than 2 decades ago, the cAMP-dependent protein kinase was shown to phosphorylate short synthetic peptides containing sequences that correspond to phosphorylated sites in intact proteins (1-4). This key observation, which has been demonstrated innumerable times for other protein kinases in the intervening years, has had a profound impact on the ability to examine the chemistry and biochemistry of this important family of enzymes. Synthetic peptides are readily available and, unlike common protein kinase substrates such as histones, can be prepared containing only a single site of phosphorylation. As a consequence, peptidic substrates have proven to be an indispensable tool in the many detailed enzymological studies that have been described for protein kinases.
In addition to their clear enzymological utility, peptide-based
substrates immediately suggest the likelihood that structurally analogous inhibitors can be prepared. Indeed, the incorporation of an
alanine residue, in place of the phosphorylatable serine moiety in a
cAMP-dependent protein kinase-directed peptide, generates a
species that serves as a competitive inhibitor versus both
peptide and protein substrates (4). Feramisco and Krebs (5)
subsequently introduced other residues in place of serine, including
glycine, valine, aspartic acid, and asparagine. However, none of these substitutions provides an inhibitor as powerful as the alanine-based peptide. Interestingly, a naturally occurring inhibitor of the cAMP-dependent protein kinase also contains an alanine
residue at the position typically reserved for serine (6). Based upon these observations, the design of protein kinase inhibitors appears to
be relatively straightforward. Inhibitors for the serine/threonine kinases should contain an alanine at the appropriate position in an
active site-directed peptide. In contrast, for the tyrosine-specific kinases, a phenylalanine-for-tyrosine exchange should generate the
desired inhibitory species. Unfortunately, the potency of the
peptide-based inhibitors created using the alanine-for-serine or
phenylalanine-for-tyrosine strategy is often disappointing. For
example, whereas kemptide (Leu-Arg-Arg-Ala-Ser-Leu-Gly) is an excellent
cAMP-dependent protein kinase substrate
(Km = 16 µM), the corresponding
alanine-containing peptide (Leu-Arg-Arg-Ala--Leu-Gly) is
a modest inhibitor (Ki = 490 µM) (5).
One explanation offered for this discrepancy is the absence of the
serine alcohol moiety in the inhibitor, a functional group that could
potentially enhance enzyme affinity via hydrogen bonding to an active
site residue. Indeed, analogous poor inhibitory performances have been recorded for phenylalanine-based peptides directed against tyrosine kinases (for recent examples see Refs. 7-9). However, Adams and Taylor
(10) have recently uncovered an additional molecular mechanism that
rationalizes the dismal inhibitory performances exhibited by
nonphosphorylatable peptides. These investigators demonstrated that the
Km associated with the cAMP-dependent protein kinase-catalyzed phosphorylation of kemptide vastly
overestimates the affinity of this peptide substrate for the enzyme
active site (i.e. Km < Kd) (10).
Although these results explain why alanine- and phenylalanine-based
peptides often serve as unexpectedly weak inhibitors, they also
demonstrate the need for nonphosphorylatable serine/threonine and
tyrosine analogs that enhance enzyme affinity. We describe herein
phenethylamine derivatives that serve in this capacity for the
tyrosine-specific protein kinase pp60c-src.
All chemicals were obtained from Aldrich, except for
[-32P]ATP (DuPont NEN), benzhydrylamine and Rink
resins, and piperidine (Advanced ChemTech), protected amino acid
derivatives and para-aminophenylalanine (Advanced ChemTech
and Bachem), and Liquiscint (National Diagnostics). The oxime resin was
prepared as described previously (11). Phosphocellulose P-81 paper
disks were purchased from Whatman. 1H NMR experiments were
performed at 400 MHz (Varian VXR-400S). Fast atom bombardment
(peptides) mass spectral analyses were conducted with a VG-70SE mass
spectrometer.
Human Recombinant pp60c-src
Human pp60c-src was purchased from Upstate Biotechnology Inc. The enzyme was expressed by recombinant baculovirus containing the human c-src gene in SF9 insect cells.
Preparation of Phenethylamine Derivatives
The phenethylamine analogs contained in peptides 1, 2, 3, 4, 5, 6, 8, 9, 12, and 21 (see Tables I and II) were purchased from Aldrich. All others were synthesized as described below. All compounds gave satisfactory NMR data.
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Fmoc-N-hydroxysuccinimide was added portionwise (in a 1:1 molar ratio) to para-aminophenethylamine (dissolved in 1,4-dioxane) and to para-aminophenylalanine (dissolved in 30% 1,4-dioxane, 70% water, and 1 equivalent of triethylamine) maintained at 0 °C. The respective solutions were stirred at room temperature for 2 h, and then water was added to produce precipitates. The heterogeneous mixtures were separately extracted with CHCl3, and the organic extracts were removed under reduced pressure. Both compounds were separately purified via silica gel chromatography using CH2Cl2 as the eluting solvent. The Fmoc-protected phenethylamine was obtained in 91% yield, whereas the corresponding phenylalanine derivative was furnished in 90% yield. Note that in both cases the Fmoc moiety is exclusively attached to the aliphatic amine.
Protocol for the Synthesis of Pentafluorophenethylamine (Phenethylamine Derivative in Peptide 7)Borane-THF (5 ml, 5 mmol) was added dropwise over a 30-min period to pentafluorophenylacetonitrile (0.83 g, 4 mmol) dissolved in 2 ml of THF (argon, O °C). The solution was warmed to room temperature and stirred for an additional 4 h. Methanol was slowly added to decompose unreacted borane, and the solvent was then removed under reduced pressure. The residue was dissolved in 20 ml of CHCl3 and subsequently washed with water. The organic layer was separated, and the solvent was then removed in vacuo. The crude product was subsequently purified by silica gel chromatography (CH2Cl2:CH3OH:NH3·H2O, 79:20:1) to furnish the desired compound in 75% yield.
Protocol for the Synthesis of para-Aminomethylphenethylamine (Phenethylamine Derivative in Peptide 10)Di-t-butyl-dicarbonate (1.09 g, 5 mmol) was added to para-aminomethylbenzyl alcohol (0.69 g, 5 mmol) (12) in dioxane (15 ml) maintained at 0 °C. The mixture was allowed to warm to room temperature and was subsequently stirred for 2 h. The solvent was then removed under vacuum, and the resultant crude product was suspended in 20 ml of water. The aqueous suspension was extracted with ethyl acetate (2 × 40 ml), and the combined organic layers were removed in vacuo. The residue was purified by silica gel column chromatography (CH2Cl2) to furnish para-t-butyloxycarbonyl (Boc)-aminomethylbenzyl alcohol in 93% yield. Methanesulfonyl chloride (0.39 g, 3.4 mmol) was slowly added over 25 min at 0 °C to the benzyl alcohol (0.71 g, 3 mmol) dissolved in 12 ml of CH2Cl2 containing triethylamine (0.34 g, 3.4 mmol). After the addition was complete, the reaction mixture was stirred for an additional 30 min at room temperature. At this point, LiBr (2.0 g, 34 mmol) in 12 ml of acetone was introduced into the reaction vessel. The resulting suspension was stirred at room temperature for 2 h. The solution was then filtered, and the solvent was subsequently removed under reduced pressure. The residue was dissolved in 50 ml of ethyl ether, the organic phase was washed with 30 ml of water, and the solvent was evaporated in vacuo to furnish the benzyl bromide in 97% yield. KCN (0.36 g) in 1 ml of water was added dropwise to a stirred solution of the benzyl bromide (0.6 g, 2 mmol) in ethanol (8 ml). The mixture was heated at reflux for 4 h. The solvent was evaporated in vacuo, and the residue was dissolved in 60 ml of ethyl ether. The latter was sequentially washed with brine and water, and then the organic phase was removed under reduced pressure. The product was subjected to silica gel column chromatography (CH2Cl2) to furnish the benzyl cyanide in 72% yield. Borane·THF (1.5 ml, 1.5 mmol) was added dropwise (0 °C, argon) over 45 min to a stirred solution of the benzyl cyanide (0.25 g, 1 mmol) in 4 ml of anhydrous THF. The solution was then stirred for an additional 4 h. Water (20 ml) was added, and the aqueous phase was subsequently extracted with CH2Cl2 (2 × 30 ml). The combined organic phases were removed under reduced pressure, and the residue was subjected to silica gel column chromatography (CH2Cl2:CH3OH:NH3·H2O, 79:20:1) to furnish the desired para-Boc-aminomethylphenethylamine in 80% yield. The Boc protecting group was removed after this phenethylamine derivative was coupled to the peptide (see below).
Protocol for the Synthesis of para-Aminoethylphenethylamine (Phenethylamine Derivative in Peptide 11)This was synthesized from 1,4-phenylenediacetonitrile via LiAlH4 reduction as described previously (12) in 67% yield.
Protocol for the Synthesis of para-Carboxamidophenethylamine (Phenethylamine Derivative in 13)KCN (0.4 g, 6.2 mmol) in 2 ml of water was added, portionwise, to a solution of
-bromo-para-toluic acid (0.86 g, 4 mmol) in ethanol (15 ml). The solution was heated to reflux for 10 h and then allowed
to cool to room temperature. The solvent was evaporated under reduced
pressure. The product was dissolved in 10 ml of water and subsequently
precipitated upon addition of a few drops of 1 N HCl. The
aqueous phase was extracted with ethyl acetate (3 × 50 ml), and
the organic layers were combined and evaporated to give 570 mg (88%
yield) of
-cyano-para-toluic acid. 0.5 g of the
latter was added to 2 ml of SOCl2, and the solution was
heated to reflux for 1 h. The solution was cooled to room temperature and subsequently poured into, with vigorous stirring, 10 ml
of an ice-cold concentrated ammonium hydroxide solution. After 30 min,
the crude product was collected by filtration and purified by silica
gel chromatography (CH2Cl2).
-Cyano-para-toluamide was obtained in 80% yield.
Borane-THF (1 ml, 1 mmol) was added dropwise over a 30-min period to 95 mg of
-cyano-para-toluamide (0.59 mmol) dissolved in 2 ml
of THF (argon, 0 °C). The solution was warmed to room temperature
and stirred for an additional 4 h. Methanol was slowly added to
decompose unreacted borane, and the solvent was then removed under
reduced pressure. The residue was dissolved in 20 ml of
CHCl3 and subsequently washed with water. The organic layer
was separated, and the solvent was then removed in vacuo.
The crude product was subsequently purified by silica gel
chromatography
(CH2Cl2:CH3OH:NH3·H2O,
79:20:1) to furnish the desired compound in 72% yield.
t-Butylamine (30 mmol) was added
portionwise to sulfuryl chloride (8 ml, 0.1 mol) in 15 ml of
acetonitrile. The solution was heated to reflux with stirring for
24 h, after which time an additional 8 ml of sulfuryl chloride was
added. After heating at reflux for an additional 24 h, the
reaction mixture was cooled to room temperature, and the solvent was
evaporated under reduced pressure. The residue was extracted with ethyl
ether (3 × 30 ml), and the organic extracts were combined and
removed in vacuo to furnish, in 60% yield,
t-butylsulfamoyl chloride
((CH3)3CNHSO2Cl). The latter (50 mg, 0.31 mmol, in 5 ml of ethyl ether) was added dropwise to a solution
of
Fmoc-NHCH2CH2C6H4NH2 (see above; 105 mg, 0.3 mmol, 50 mg of triethylamine, 10 ml of ethyl
ether) maintained at 78 °C. The solution was slowly allowed to
warm to room temperature and stirred overnight. The solvent was removed
under reduced pressure, and the residue was subsequently dissolved in
20 ml of CH2Cl2. The latter was washed with
water. The organic solvent was removed under reduced pressure, and 5 ml
of 10% piperidine in CH2Cl2 was introduced to
deprotect the Fmoc-protected amine (the solution was allowed to stand
for 15 min). The solvent was removed in vacuo, and the
residue was subjected to silica gel column chromatography
(CH2Cl2:CH3OH:NH3·H2O,
79:20:1) to furnish the desired t-butyl-derivatized
sulfamate in 86% yield. The t-butyl group was subsequently
removed after this phenethylamine derivative was coupled to the peptide
(see below).
Borane·THF (5 ml,
5 mmol) was slowly added over 20 min at 10 °C to a stirred
solution of para-methylsulfonylbenzoic acid (1.0 g, 5 mmol)
in 5 ml of THF. After the addition was complete, the solution was
allowed to warm to room temperature and then stirred for 4 h.
Water (30 ml) was added, and the solution was then extracted with ethyl
ether (3 × 60 ml). Evaporation of the combined organic phases
furnished para-methylsulfonylbenzyl alcohol in 75% yield.
The benzyl alcohol was subsequently converted to the corresponding
bromide (87% yield), cyanide (75% yield), and desired phenethylamine
(73% yield) derivatives via the protocol described above for
10.
Phenethylamine (2.4 g, 20 mmol) was added to chlorosulfonic acid (5 g, 43 mmol) at
10 °C. The mixture was stirred overnight. Wet ice was then added,
the solution was neutralized with 6 N NaOH, and the solvent
was removed under reduced pressure. Methanol was added to extract the
desired product from the residual salt, the mixture was filtered, and
the solvent was removed under reduced pressure to furnish
para-sulfonoxyphenethylamine in 51% yield.
Prepared as described below for para-methylsulfonamidophenethylamine with the exception that acetic anhydride was used in place of methanesulfonyl chloride. para-acetamidophenethylamine was obtained in 90% yield.
Protocol for the Synthesis of para-Methylsulfonamidophenethylamine (Phenethylamine Derivative in 18)Methanesulfonyl chloride (69 mg, 0.6 mmol) was added dropwise over a period of 10 min to an ice-cold solution of the mono-Fmoc derivative of para-aminophenethylamine (0.18 g, 0.5 mmol) dissolved in 4 ml of anhydrous CH2Cl2 containing triethylamine (76 mg, 0.76 mmol). The solution was then stirred at room temperature for 2 h. CH2Cl2 (20 ml) was added to the reaction mixture, and the solution was then washed with water. The organic phase was evaporated under reduced pressure, and 5 ml of 10% piperidine in CH2Cl2 was added to deprotect the Fmoc-protected amine (15-min reaction time). The solvent was removed in vacuo, and the residue was subjected to silica gel column chromatography (CH2Cl2:CH3OH:NH3·H2O, 79:20:1) to furnish the desired product in 81% yield.
Protocol for the Synthesis of para-Guanidinophenethylamine (Phenethylamine Derivative in 19)HgCl2 (105 mg, 0.39 mmol) was added to a solution containing the mono-Fmoc derivative of para-aminophenethylamine (i.e. Fmoc-NHCH2CH2C6H4NH2) (125 mg, 0.35 mmol), bis-Boc-thiourea (102 mg, 0.37 mmol) (13), and pyridine (92 mg, 1.2 mmol) in 2 ml of N,N-dimethylformamide maintained at 0 °C. The resulting solution was stirred at room temperature for 4 h. The solution was then filtered, and the solvent was removed under reduced pressure. 5 ml of 10% piperidine in CH2Cl2 was added to remove the Fmoc protecting group (15-min reaction time). The solvent was removed in vacuo, and the residue was subjected to silica gel column chromatography (CH2Cl2:CH3OH:NH3·H2O, 79:20:1) to furnish para-bis-Boc-guanidinophenethylamine in 65% yield. The Boc protecting groups were removed after this phenethylamine derivative was coupled to the peptide (see below).
Protocol for the Synthesis of Peptide 20The side chain-protected crude peptide 9 (from 200 mg of Glu(O-t-butyl)-Glu(O-t-butyl)-Leu-Leu-oxime resin; see below) was suspended in 2 ml of water. 100 mg of NaHCO3 was added to this mixture, followed by 126 mg of dimethylsulfate. The solution was heated to 50 °C for 20 min and subsequently stirred at room temperature for 2 h. The solvent was removed in vacuo, and the residue was lyophilized. The side chain protecting groups were removed as described below under "Preparation of the Glu-Glu-Leu-Leu-phenethylamine Conjugates."
Protocol for the Synthesis of N-Fmoc-L-para-bis-Boc-guanidinophenylalanine (the Protected Analog of 24 (see Fig. 3))The
mono-Fmoc derivative of para-aminophenylalanine was prepared
as described above and subsequently converted to the bis-Boc derivative
(92% yield) employing the same protocol as described for
para-guanidinophenethylamine.
Preparation of Glu(O-t-butyl)-Glu(O-t-butyl)-Leu-Leu-oxime Resin
The tetrapeptide-oxime resin was prepared according to a previously described Boc protocol using an Advanced ChemTech Act 90 peptide synthesizer (14).
Preparation of the Glu-Glu-Leu-Leu-phenethylamine Conjugates
The tetrapeptide-phenethylamine conjugates were synthesized by treating Glu(O-t-butyl)-Glu(O-t-butyl)-Leu-Leu-oxime resin with the phenethylamine derivatives described above. These reactions were performed with CHCl3 as the solvent (except for 12 and 16, for which N,N-dimethylformamide was employed). The side chain-protected peptides were purified by preparative HPLC (C18 reverse phase) employing the following solvent protocol with solvent A (0.1% trifluoroacetic acid in water) and solvent B (0.1% trifluoroacetic acid in acetonitrile): 0-1 min (100% A); a linear gradient from 1-3 min (100% A to 80% A, 20% B); 3-20 min (80% A, 20% B to 60% A, 40% B); 20-25 min (60% A, 40% B to 15% A, 85% B). The appropriate fractions were collected and lyophilized. The side chain protecting groups were then removed via treatment of the peptide with 1 ml of 90% trifluoroacetic acid, 10% thioanisole for 1 h (with the exception of 14 (6 h) and 19 (20 h)). The crude peptides were precipitated via the addition of ethyl ether, collected, and then purified by preparative HPLC. For peptides 1-8, 15, and 21, the following protocol was employed: 0-3 min (100% A); a linear gradient from 3 to 5 min (100% A to 80% A, 20% B); 5-20 min (80% A, 20% B to 60% A, 40% B); 20-25 min (60% A, 40% B to 15% A, 85% B). For peptides 9-14 and 16-20 the following protocol was employed: 0-3 min (100% A); a linear gradient from 3 to 30 min (100% A to 65% A, 35% B); 30-35 min (65% A, 35% B to 15% A, 85% B). All of the fractions containing the desired peptide were collected and lyophilized. All peptide-phenethylamine conjugates gave satisfactory mass spectral analyses.
Preparation of Arg-Arg-Arg-Arg-Arg-Leu-Glu-Glu-Leu-Leu-Tyr-amide
This pp60c-src substrate was prepared on the rink resin (15) (substitution level = 0.30 mmol/g resin). A standard Fmoc synthesis protocol was employed using a Miligen Biosearch 9600 peptide synthesizer (the N-terminal arginine was incorporated in the N-Boc-protected form). The side chain protecting groups were removed, and the peptide was cleaved from the resin simultaneously via treatment with 90% trifluoroacetic acid, 10% thioanisole (6 h). The mixture was filtered, and the filtrate was treated with ethyl ether to precipitate the crude peptide. The peptide was then purified via ion exchange chromatography on CM-Sephadex C-25 (using a 50 mM potassium acetate, pH 3.5, buffer with a 0.5 M KCl to 1.4 M KCl gradient). The desired peptide was collected and subjected to preparative HPLC as described for peptides 1-8.
Preparation of Glu-Glu-Leu-Leu-(pentafluoro)Phe-Gly-Glu-Ile (22)
22 was prepared on the benzhydrylamine resin (substitution level = 0.44) using a Boc synthesis protocol. The side chain protecting groups were removed, and the peptide was simultaneously cleaved from the resin via treatment with anhydrous HF (10 ml of HF/g of peptide-bound resin) containing para-cresol (1 g/10 ml of HF) for 1 h at 0 °C. The cleaved deprotected peptide was dissolved in methanol and then filtered to remove the solid resin. The crude peptide was then purified on a Dowex 1 × 8-200 (chloride form) resin using a 0.5% NaCl solution and then subsequently subjected to the HPLC protocol described for peptides 1-8.
Preparation of Glu-Glu-Leu-Leu-(para-guanidine)-Phe-Gly-Glu-Ile (23) and Glu-Glu-Leu-Leu-Phe-Gly-Glu-Ile (25)
These peptides were prepared as described above for Arg-Arg-Arg-Arg-Arg-Leu-Glu-Glu-Leu-Leu-Tyr-amide with the exceptions that 23 was cleaved from the resin with 90% trifluoroacetic acid, 10% thioanisole for 20 h and that both 23 and 25 were purified on a Dowex 1 × 8-200 (chloride form) resin using a 0.5% NaCl solution. Peptide 23 was purified by HPLC using the protocol described for peptides 16-20, and peptide 25 was purified employing the HPLC protocol described for peptides 1-8.
Kinase Assay
Assays were performed in triplicate at pH 7.5 and thermostatted
in a water bath maintained at 30 °C. For determination of the
IC50 values, the following protocol was employed.
Phosphorylation reactions were initiated by the addition of 10 µl of
pp60c-src diluted from a concentrated stock
solution (3.97 nM in 1 mM dithiothreitol and 20 mM Hepes, pH 7.5) to a final 50-µl solution containing peptide inhibitor concentrations that varied about their respective IC50 values, 100 µM
[-32P]ATP (1000 cpm/pmol), 750 µM
Arg-Arg-Arg-Arg-Arg-Leu-Glu-Glu-Leu-Leu-Tyr-amide substrate, 20 mM Hepes, 20 mM MgCl2, 0.125 mg/ml
bovine serum albumin, 100 µM
Na3VO4, and 0.79 nM
pp60c-src. Reactions were terminated after 30 min
by spotting 25-µl aliquots onto 2.1-cm diameter phosphocellulose
paper disks. After 10 s, the disks were immersed in 10% glacial
acetic acid and allowed to soak with occasional stirring for 1 h.
The acetic acid was decanted, and the disks were collectively washed
with 4 volumes of 0.5% H3PO4, 1 volume of
water, followed by a final acetone rinse. The disks were air-dried and
placed in plastic scintillation vials containing 3 ml of Liquiscint
prior to scintillation counting for radioactivity. The following
conditions were employed for the determination of the
Ki values. The [
-32P]ATP (1000 cpm/pmol) was fixed at 100 µM for experiments with variable peptide substrate (600-1800 µM). The peptide
substrate was fixed at 750 µM for experiments with
variable [
-32P]ATP (1800 cpm/pmol, 15-60
µM). Inhibitor concentrations were varied about their
respective Ki values in both sets of experiments.
The reactions were initiated and terminated as described above.
Given the key role played by tyrosine kinases in transducing growth-promoting signals from the cell surface to the nucleus, it is not surprising that there has been intense interest in developing potent inhibitors for individual members of this enzyme family. The majority of successful inhibitors described to date are targeted to the ATP binding site (16). In marked contrast, the few peptide-based species designed to impede protein substrate binding have been, in general, disappointing (for recent examples, see Refs. 7-9). These peptides often contain a nonphosphorylatable phenylalanine moiety in place of the tyrosine residue. Their poor inhibitory efficacy may be due to the fact that the aromatic alcohol of tyrosine has been replaced by a single hydrogen atom, and the latter is incapable of participating in any productive interactions with active site residues. In addition, Wang et al. (7) have demonstrated that, in some cases, the Km values exhibited by tyrosine-based peptide substrates are gross overestimates of how well these peptides bind to the target enzyme. Is it possible to replace the tyrosyl hydroxyl with a functional group that simultaneously blocks phosphoryl transfer yet promotes enzyme affinity? The obvious way to address this question is to prepare phenylalanine derivatives containing a variety of functional groups positioned at the para position. These derivatives can then be inserted into active site-directed peptides, via solid phase peptide synthesis, and subsequently assayed for inhibitory potency. Unfortunately, the synthetic obstacles associated with this approach are impressive. First, although some phenylalanine analogs are commercially available, many structurally interesting derivatives are not. Consequently, a labor-intensive synthetic research effort will be required to generate a reasonable variety of phenylalanine derivatives for testing purposes. Second, for each inhibitor candidate to be examined, a complete peptidic species must be synthesized. Finally, some functional groups may simply not survive the harsh conditions of solid phase peptide synthesis, thereby limiting the range of compounds that can be investigated as nonphosphorylatable replacements for tyrosine.
We have previously demonstrated that protein kinases will catalyze the
phosphorylation of alcohol-bearing residues at the C terminus of
active site-directed peptides. For example,
pp60c-src utilizes
Arg-Arg-Arg-Arg-Arg-Leu-Glu-Glu-Leu-Leu--amide as a
substrate (12). This observation provides a means to circumvent the
synthetic disadvantages (enumerated above) associated with the
preparation of peptides containing an assortment of internally positioned hypermodified amino acid residues. The general approach is
illustrated in Fig. 1. First, the active site-directed
peptide is synthesized by employing a standard Boc protocol on a
modified polystyrene support (17). The peptide can subsequently be
simultaneously displaced from the solid support and condensed with an
appropriate amine. This double displacement/condensation reaction is
possible due to the labile nature of the oximate ester linkage between the peptide and the polystyrene bead. In the study described herein, Glu-Glu-Leu-Leu-oxime·resin was treated with a variety of
para-substituted phenethylamine derivatives
(H2NCH2CH2C6H4-X)
to produce active site-directed peptides of the general structure
Glu-Glu-Leu-Leu-HNCH2CH2C6H4-X.
We examined a total of 20 different nonphosphorylatable phenethylamine derivatives (Table I). Our initial survey of the inhibitory efficacy of these compounds focused on the acquisition of IC50 values at fixed ATP (100 µM) and peptide substrate (Arg-Arg-Arg-Arg-Arg-Leu-Glu-Glu-Leu-Leu-Tyr-amide, at its Km of 750 µM), since significantly larger quantities of inhibitor and, in particular, enzyme, are required to obtain Ki values. Compound 1, which contains the parent phenethylamine itself, is structurally analogous to that of phenylalanine. The nearly 2 mM IC50 value associated with this species is in keeping with the poor inhibitory performances exhibited by other, previously described, phenylalanine-based tyrosine kinase inhibitors (7-9). For comparative purposes, we also investigated the inhibitory activity of the tyramine-containing analog, 2. We have previously shown that this alcohol-bearing residue is phosphorylated by pp60c-src when attached to the C-terminal position of Arg-Arg-Arg-Arg-Arg-Leu-Glu-Glu-Leu-Leu- (12). However, since we attached tyramine to Glu-Glu-Leu-Leu- in this study, any phosphorylation of the aromatic alcohol will be "invisible" to the phosphocellulose paper disc detection method. As an inhibitor of the pp60c-src-catalyzed phosphorylation of Arg-Arg-Arg-Arg-Arg-Leu-Glu-Glu-Leu-Leu-Tyr-amide, peptide 2 exhibits an IC50 of 300 ± 10 µM. In short, there is an apparent 7-fold difference in inhibitory efficacy between 1 and 2. Clearly, it is tempting to attribute this difference in inhibitory activity to the presence of the hydroxyl group on 2, a known hydrogen bond donor and acceptor. Is it possible to replace the hydroxyl moiety with a nonphosphorylatable functional group that retains (or even exceeds) the apparent enhancement in affinity for pp60c-src afforded by the aromatic alcohol?
The methyl-substituted derivative 3 is a slightly poorer
inhibitor than 1. The halogenated derivatives 4, 5, and 6 are also somewhat weaker as inhibitors compared with 1. However, the pentafluoro derivative
7 is significantly more effective as an inhibitor than its
monohalogenated counterparts. One possible explanation for this
behavior is that the electron-deficient aromatic ring in 7 may interact with an electron-rich moiety in the active site of
pp60c-src, thereby enhancing enzyme affinity.
Interestingly, the methoxy-substituted species (8) contains
a significantly more electron-rich aromatic system than its counterpart
in 1; however, the inhibitory potency of 8 is
nearly identical to that of 1. This may imply that the
electron density associated with the system has little influence on
active site affinity or, at the very least, that only profoundly
electron deficient aromatic systems (i.e. as in
7) interact with the active site in a unique fashion. An
alternative explanation for the unusual behavior of 7 is
based upon recent work by Whitesides and colleagues (18). These
investigators demonstrated that the apparent greater lipophilicity of
fluorocarbons, relative to their hydrocarbon counterparts, is due to
the larger hydrophobic surface area associated with the former. In
short, the enhanced inhibitory potency of 7, compared with
that of 1, may be due to this difference in relative
hydrophobic surface area. Indeed, the recently elucidated three-dimensional structure of the insulin receptor reveals that the
tyrosine binding site is in a particularly lipophilic region of the
active site (19). Sequence alignments suggest that a structurally
analogous situation should be present in
pp60c-src (20).
The alcohol in tyrosine and the amine in 9 are not only similar in size but are also electronically analogous in that they both can serve as hydrogen bond donors and acceptors. Furthermore, since the amine is directly positioned on the aromatic ring in 9, it is not strongly basic and therefore will not be protonated under physiological conditions. Most importantly, the aromatic amine, unlike the corresponding alcohol, is not particularly acidic and therefore should not be deprotonated by the active site base. Rather, it could conceivably hydrogen bond to the latter without promoting phosphoryl transfer. Given these promising characteristics, the inhibitory potency of 9 is surprisingly poor. In fact, 9 is an even poorer inhibitor of pp60c-src than 1. In contrast, and somewhat unexpectedly, the aliphatic amines 10 and 11 are slightly better inhibitors than 1. The aromatic amine of 9 exhibits profoundly different structural properties than those in 10 and 11. First, the latter two will be protonated under physiological conditions (of course, it is not clear if they bind to the active site in the positively charged form). In addition, 10 and 11 both enjoy a considerably greater degree of conformational mobility than that of the aromatic amine in 9. In addition, the amines in 10 and 11 may penetrate somewhat deeper into the active site than their counterpart in 9. Is conformational mobility and/or the degree of active site penetration responsible for the enhanced inhibitory potencies associated with 10 and 11? We prepared several compounds to address this question.
The sulfonamide 12 displays an IC50 of 325 µM, which is significantly better than those exhibited by the parent species 1 as well as the benzylamine 10. Indeed, the inhibitory potency of 12 is essentially identical to that displayed by the substrate 2. The nitrogen atom in 12 is positioned, to a first approximation, somewhat analogously to that in 10. However, the amine in 12 is clearly more conformationally restricted than its counterpart in 10. In addition, the sulfonamide nitrogen is not basic enough to be protonated at physiological pH. In short, the sulfonamide functionality in 12 is a neutral conformationally restricted version of the methylamine moiety in 10. This may imply that it is the position of the nitrogen relative to the aromatic ring, and not conformational mobility, that is crucial for inhibitory potency. Interestingly, 13, which contains a carboxamide moiety at the para position, is not as potent an inhibitor as 12. Clearly, additional structural factors must influence enzyme affinity (see below). We also prepared the derivative 14, in which a nonbasic amine is now positioned further from the aromatic ring system than in 12. Unfortunately, 14 is disappointing as an inhibitor.
Is the sulfonyl group, and not the amine, responsible for the inhibitory properties of 12? Although we viewed this possibility as unlikely, we did prepare the methyl sulfone (15) as well as the sulfonic acid (16). Both 15 and 16 lack the amine moiety present in 12. In addition, the sulfonic acid moiety in 16 is negatively charged at neutral pH. Neither 15 nor 16 are effective inhibitors of pp60c-src. The poor inhibitory performance of 16, in particular, is noteworthy in light of the previous work of Graves and colleagues (21). These investigators prepared a gastrin analog in which the phosphorylatable tyrosine is replaced with both L- and D-tetrafluorotyrosine residues. Neither of these peptides serve as substrates for the insulin receptor, although both act as potent inhibitors. The L-tetrafluorotyrosine-containing peptide is particularly intriguing, since it functions as a competitive inhibitor versus protein substrate as well as versus ATP. Tetrafluorotyrosine exists as the negatively charged phenoxide at physiological pH as a consequence of the electron withdrawing fluorine substituents. These investigators proposed that the ionized phenoxide may mimic the transition state of the kinase-catalyzed reaction, which in turn explains the "bisubstrate" inhibition patterns exhibited by this species. We simply note here that the negatively charged sulfonic acid-containing derivative (16) is a weak inhibitor compared with the majority of inhibitors listed in Table I. This may imply that negatively charged functionality must be properly positioned on the aromatic nucleus in order to ensure potent inhibition. Alternatively, it is possible that structural motifs that are effective against the insulin receptor may be spectacularly ineffective against pp60c-src. Finally, we also prepared two compounds in which the sulfonyl (carbonyl) and amine groups are inverted relative to their positions in 12 (and 14). 17 and 18 are among the poorest inhibitors identified in this study.
Given the apparent requirement for a nitrogen atom, one (i.e. 10) or two (i.e. 11) atoms removed from the aromatic nucleus on the para-positioned side chain, we synthesized the guanidino-derivatized analog 19. Indeed, this compound is nearly as effective as 12 in its inhibitory potency toward pp60c-src. In contrast, the bulky positively charged trimethylammonium derivative 20 is a poor inhibitor as well as its neutral, but polar, nitro-containing counterpart 21.
Since 12 serves as the most potent inhibitor in this study,
we decided to examine its mode of action in somewhat greater detail. In
particular, the aromatic sulfonamide moiety in 12 is
structurally reminiscent of various isoquinoline sulfonamides that have
been previously shown to serve as protein kinase inhibitors by
coordinating to the ATP binding site (22). Consequently, we were
concerned that the phenylsulfonamide in 12 may actually be
functioning as an ATP analog. However, peptide 12 serves as
a competitive inhibitor versus variable peptide substrate and as a noncompetitive inhibitor versus variable ATP (Fig.
2). These results confirm that 12 functions
as a Src kinase inhibitor in the intended fashion, namely, by
coordinating exclusively to the protein and not to the ATP binding site
of pp60c-src. The Ki (300 ± 20 µM) value obtained from the variable substrate
experiment is analogous to the IC50 (325 ± 14 µM) value exhibited by 12.
The sulfonamide moiety in 12 is the most potent tyrosine
surrogate that we have identified to date. However, we were curious
whether the results that we obtained with the phenethylamine series
would apply to the more conventional phenylalanine-based inhibitory
peptides. For these studies we prepared
Glu-Glu-Leu-Leu--Gly-Glu-Ile (22) and
Glu-Glu-Leu-Leu-
-Gly-Glu-Ile (23). In the later case, we employed the
para-guanidine derivative 24 (Fig.
3), whose synthesis is described under "Materials and
Methods." As a control, we also prepared peptide Glu-Glu-Leu-Leu-
-Gly-Glu-Ile (25). One might
expect that the completely peptidic environment would enhance enzyme affinity compared with the truncated peptides employed for the preparation of the inhibitors listed in Table I. Indeed, it does, but
only to a modest extent with the primary sequence chosen. The
pentafluorophenylalanine-containing derivative (22) exhibits
a Ki of 240 ± 10 µM, and the
guanidine-containing derivative (23) displays a
Ki of 180 ± 10 µM. In contrast,
Glu-Glu-Leu-Leu-
-Gly-Glu-Ile (25) is a somewhat more modest inhibitor (Ki = 860 ± 20 µM). Furthermore, the phenethylamine/phenylalanine pairs
exhibit the same relative difference in inhibitory potency. The
Ki of the peptide containing
para-guanidinophenylalanine (23) is nearly half (i.e. 0.46) of that displayed by its
para-guanidinophenethylamine analog (19).
Similarly, the corresponding ratio for the pentafluorophenylalanine/pentafluorophenethylamine pair
22/7 is 0.44. In short, the IC50 and
Ki values that we have obtained with the
phenethylamine series of compounds listed in Tables I and
II appear to be excellent indicators of the inhibitory potency of the corresponding tyrosine analogs in conventional peptides.
To the best of our knowledge, the para-guanidino (19), para-sulfonamido (12), and pentafluorophenyl (7) derivatives are the first and only examples of nonphosphorylatable tyrosine surrogates2 with demonstrated enhanced inhibitory properties relative to both phenethylamine (1) and phenylalanine (24). The sulfonamide-based species is the best inhibitor identified to date. However, given the number of nonphosphorylatable tyrosine analogs investigated in this study, it is curious that the most potent species is equivalent to, but not better than, the corresponding aromatic alcohol substrate in terms of inhibitory potency. Although it would be somewhat rash to rule out the possibility that more potent analogs may be acquired in the future, it is conceivable that there is little additional binding energy to be gained within the immediate microenvironment of the alcohol binding region. However, based on the results described herein, it is clear that analogous strategies may lead to the acquisition even more powerful inhibitors. For example, functional groups can be positioned on the aromatic ring that extends into the ATP binding domain, a region where additional electrostatic and hydrophobic interactions can be appropriated. Indeed, "bisubstrate analogs" have been employed as inhibitors for a number of enzymes, including protein kinases. In addition, the comparatively good inhibitory profile of the pentafluoro derivative (7) suggests a second alternative for inhibitor development, namely modification of the phenolic aromatic ring. The latter approach, in combination with the results described herein, may ultimately provide inhibitors that exhibit both selectivity and high affinity for specific protein kinase targets.