Kinetic Mechanism of a Monomeric Kinesin Construct*

(Received for publication, May 21, 1996, and in revised form, October 17, 1996)

Yong-Ze Ma and Edwin W. Taylor Dagger

From the Department of Molecular Genetics and Cell Biology, The University of Chicago, Chicago, Illinois 60637

ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
Acknowledgment
REFERENCES


ABSTRACT

The kinetic mechanism is analyzed for a monomeric human kinesin construct K332. In the absence of microtubules, the rate constants of the ATPase cycle are very similar to dimeric human kinesin K379 and whole kinesin from bovine brain. The microtubule-activated ATPase is 60 s-1 at 20 °C; Km(Mt) is 5 µM; dissociation constants in the presence of ATP and ADP are 9 µM and 16 µM, respectively. The values of dissociation constants are 5 times larger than for K379. Binding of K332 to microtubules increased the rate of the hydrolysis step from 7 s-1 to greater than 200 s-1 and the 2'-(3')-O-(N-methylanthraniloyl) (mant) ADP dissociation step from 0.02 s-1 to greater than 100 s-1. At higher ionic strength, more than one ATP is hydrolyzed before dissociation of MtK332 (small processivity). Data are fitted to the kinetic scheme.
<UP>MtK + ATP </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><UL><IT>k</IT><SUB><UP>1</UP></SUB></UL></LIM><UP> MtK · ATP </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><UL><IT>k</IT><SUB><UP>2</UP></SUB></UL></LIM><UP> MtK · ADP · P </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><UL><IT>k</IT><SUB><UP>3</UP>(<UP>−P</UP>)</SUB></UL></LIM><UP> </UP>
<AR><R><C>MtK</C></R><R><C>⥮<IT>k</IT><SUB><UP>dis</UP></SUB></C></R><R><C><UP>K · ADP</UP></C></R></AR>
<AR><R><C><UP> · ADP </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><UL><IT>k</IT><SUB><UP>4</UP></SUB></UL></LIM><UP> MtK + ADP</UP></C></R><R><C><RM> </RM></C></R><R><C><RM> </RM></C></R><R><C></C></R></AR>
<SC><UP>Scheme</UP></SC><UP> 1</UP>


INTRODUCTION

Approximate values of rate constants are k1 = 500 s-1, k2 >=  200 s-1, k3k4/(k3 + k4) = 100 s-1, kdis = 80 ± 10 s-1. Two experiments to measure k4 gave 110 s-1 from the maximum rate of dissociation of mant ADP for reaction of K·ADP with microtubules and 300 s-1 from extrapolation to zero concentration of rate of binding of mant ADP to MtK. It is proposed that mant ADP dissociation is a two-step process. In the simple scheme, k4 is the effective rate of the two-step release of ADP, k4 = 150 s-1 to 200 s-1, and k3 = 150 s-1 to 200 s-1 to account for the steady state rate.

The detailed kinetic mechanism of microtubule kinesin ATPase has been investigated previously using dimeric kinesin constructs (1, 2, 3, 4). The scheme has been analyzed in terms of an independent head model, but it is known that the heads interact at least in the ADP dissociation step (5).

A comparison of the kinetic behavior of a monomeric and a dimeric kinesin should allow us to determine which steps in the mechanism are affected by interaction between heads. Molecular weight measurements for various constructs showed that the dissociation constant of the dimer decreases with increasing chain length (6, 7, 8). The dimer is stabilized by a sequence of 30 to 40 amino acids between 340 and 380 which are believed to form a coiled-coil (9).

The present work is a study of a monomeric human kinesin construct of 332 amino acids (K332).1 Relative to the sequence at the C-terminal end, human K332 is equivalent to Drosophila 340, the first monomer to be studied (6). In the absence of microtubules, the kinetic properties of K332 are essentially the same as the K379 dimer or whole kinesin (1, 10). Therefore, it is suitable for comparison of the microtubule-activated ATPase of a monomer versus a dimer.

The rate constants of the steps in the kinetic mechanism of MtK332, ATP binding, the hydrolysis step, ADP dissociation, and dissociation of the MtK332 complex by ATP and ADP are quantitatively different for monomer and dimer. A simple kinetic scheme is proposed which accounts for most of the experimental results and provides a basis for comparison of the mechanisms. The dissociation of mant ADP is not explained by the simple model, and it is proposed that there are two ADP intermediate states.


MATERIALS AND METHODS

Expression and Purification of Human Kinesin 332

Escherichia coli BL21(DE3) cells were transformed with a pET plasmid containing the truncated kinesin gene which was kindly provided by L. Romberg and used for expression of K332 protein. The construct was prepared from the human cDNA clone of Navone et al. (11), which was obtained from a placenta cDNA library. The methods of cell culture and the purification of K332 were essentially the same as for K379 (1). The purified protein was dialyzed overnight against the standard buffer used in all experiments (25 mM PIPES, pH 6.9, 2 mM MgCl2, 1 mM EGTA), plus 50 mM NaCl and 2 µM ATP and then clarified. Sucrose (10% final concentration) was added, and the solution was stored at -80 °C. The yield of K332 was about 85 mg from 1400 mg of crude protein. The preparations used in this work were at least 90% pure based on SDS-polyacrylamide gel electrophoresis. The content of nucleotide binding sites was determined by a centrifuge column method using [3H]ATP (1). The protein concentration was measured by Bio-Rad Protein Assay reagent using calibration curves prepared with bovine serum albumin or myosin subfragment 1. The total bound nucleotide was 0.95 to 1.0 per 38-kDa molecular mass after correction for 10% impurities.

Human kinesin K349 monomer was prepared by the same method using a plasmid provided by R. D. Vale. The methods of preparation of microtubules, [3H]K332, ATPase assays, stopped flow, and quench flow measurements were recently described (1, 2).

Preparation of Nucleotide-free K332

The strongly bound ADP was removed by the method described previously (1). Briefly, the protein was bound to a phosphocellulose column and nucleotide was removed by washing with 2 mM EDTA in standard buffer minus MgCl2. The protein was eluted with 500 mM NaCl in standard buffer plus 20% glycerol. The content of nucleotide binding sites was at least 0.8 mol/mol of K332 assayed by the centrifuge column method or by titration of mant ADP fluorescence enhancement. The nucleotide-free K332 was more stable than K379 which tends to aggregate with loss of binding activity. There was no significant loss of nucleotide binding sites during 2 weeks at -20 °C in the high salt-glycerol buffer. Bound ADP could also be removed by treatment with apyrase (Sigma Potato Apyrase, grade VII). The nucleotide-free K332 prepared by apyrase had essentially the same properties as the protein treated with EDTA, and it was used in some experiments.

Preparation of mant ATP

Preparation of the mixed isomer 2'-(3')-O-(N-methylanthraniloyl) ATP (mant ATP) was described previously (1). The reaction was scaled down to prepare 2'-deoxy,3'-mant ATP and 3'-deoxy,2'-mant ATP from 10-mg amounts of 2'-deoxy- or 3'-deoxy-ATP. The yield was about 60%. The purity was checked by thin layer chromatography on silica plates in 1-propanol/NH4OH/H2O, 6:3:1 by volume plus 0.5 g/liter EDTA.

Molecular Weight of K332

The molecular weight was estimated by gel filtration on calibrated Sepharose CL6B and Sephacryl S-300 superfine columns as described previously (1). The elution position was also compared with K379 dimer and [3H]K349 monomer run on the same column. The calculated molecular mass was 35 ± 5 kDa, and the peak essentially coincided with the K349 peak. Concentrations were calculated using a molecular mass of 38 kDa obtained from the amino acid composition.


RESULTS

Kinetic Properties of K332

The rate of binding of mant ATP was measured by the enhancement of fluorescence. A typical recording is shown in Fig. 1A. The fluorescence increased to a maximum and decreased to about two-thirds of the maximum value. A biphasic signal was also obtained with K379 and brain kinesin (1, 10).


Fig. 1. Time course of the fluorescence enhancement for the reactions of mant ATP and 3'-deoxy,2'-mant ATP with nucleotide-free K332. A, 4 µM K332 and 20 µM mant ATP (concentration after mixing 1:1 in the stopped flow apparatus). The jagged curve is the actual fluorescence signal, and the smooth curve is the computer-generated best fit to two exponential terms; rate constants 110 s-1 and 6.5 s-1. B, 2 µM K332 and 15 µM 3'-deoxy,2'-mant ATP. The signal was fitted to one exponential term with a rate constant of 100 s-1. Conditions: 20 °C, standard buffer (25 mM PIPES, pH 6.9, 2 mM MgCl2, 1 mM EGTA) plus 10 mM NaCl.
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mant ATP or mant ADP is a mixture of 2' and 3' isomers. The reaction of 2'-deoxy,3'-mant ATP with K379 gave a much larger decrease phase such that the signal fell almost back to baseline while the 2'-deoxy,3'-mant ADP gave a very small fluorescence enhancement (1). The fluorescence signal for the binding of 3'-deoxy,2'-mant ATP is shown in Fig. 1B. There is essentially no decrease phase. The 2'-deoxy- and 3'-deoxy-mant nucleotides are satisfactory substrates with similar maximum rates of the microtubule-activated ATPase. The fluorescent group in the 3' position apparently detects a second step in the reaction which quenches the enhancement.

The signal for mant ATP was fitted to two exponential terms, and the observed rate constants are plotted in Fig. 2A. The fluorescence increase phase fitted a hyperbolic dependence with a maximum rate of 300 s-1, and the initial slope gave an apparent second order rate constant of 9 µM-1 s-1 in 10 mM NaCl. The decrease phase is independent of substrate concentration as expected for a sequential process, and the rate constant is 7 s-1. The corresponding values of the rate constants for K379 are 200 s-1 and 9 s-1 for the increase and decrease phases measured in 50 mM NaCl (1). The lower ionic strength was chosen because the MtK332 complex is partly dissociated by nucleotides at higher ionic strength which complicates the determination of the rate constants of the complex for comparison with K332. The larger values for the maximum rate and apparent second order rate constant of K332 versus K379 are partly a result of the lower ionic strength.


Fig. 2. Concentration dependence of apparent rate constants for the binding of mant ATP and mant ADP to nucleotide-free K332. The apparent rate constant was obtained by fitting the fluorescence signal to one exponential term at low substrate and to two exponential terms at higher substrate concentrations. bullet , apparent rate constant for the increase in fluorescence; open circle , apparent rate constant for the decrease in fluorescence. Conditions as in Fig. 1. Bars are standard deviations of three or four measurements. A, binding of mant ATP. The curve for rate of increase of fluorescence was fitted to a hyperbola, maximum rate of approximately 350 s-1; horizontal line is a rate constant of 7 s-1. The K332 concentration was varied from 0.2 to 20 µM to maintain the ratio of substrate to nucleotide-free K332 at 4:1 for concentrations less than 3 µM and 5:1 or larger at higher concentrations. B, binding of mant ADP. The rising curve is a fit to a hyperbola for concentrations greater than 5 µM, maximum rate 400 s-1; rate constant for the decrease phase is 35 s-1.
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The binding of mant ADP also gave a biphasic signal. The two rate constants are plotted in Fig. 2B. The curve for the increase phase is "S"-shaped with an initial slope of 4 µM-1 s-1 and maximum rate of 350 s-1. The decrease phase has a rate of 35 s-1. The values for K379 are 200 s-1 and 40 s-1 for the increase and decrease phases.

It was shown previously, from the solution of the rate equations, that the upward curvature of a plot of rate constant versus mant ADP concentration can arise from a partial cancellation of the increase and decrease phases of the signal (1). To test this conclusion, rate constants were measured for the binding of 3'-deoxy,2'-mant ADP which has almost no decrease phase. A plot of rate constant versus concentration showed almost no curvature (data not shown). These findings for the monomer provide support for our previous conclusion that the "S"-shaped plot obtained for the K379 dimer was caused by the fitting procedure rather than interaction between heads.

The nucleotide-free K332 gave a phosphate burst phase with a rate constant of 8 s-1 and amplitude of 0.88 mol per site, corrected for loss of binding sites (data not shown). The value for K379 is 9 ± 1 s-1. The rate constant for the fluorescence decrease is equal to the rate of the phosphate burst within experimental error. As discussed previously for K379 (1), the fluorescence decrease phase may be determined by the effective rate of the step or steps leading to phosphate dissociation and formation of the K·ADP complex.

The steady state rate of K332 is 0.02 s-1 at 20 °C which is equal to the rate of ADP or mant ADP dissociation determined from fluorescence enhancement. Therefore, the properties of K332 in the absence of microtubules are very similar to the K379 dimer.

Microtubule K332: Steady State Properties

The activation of K332 ATPase by microtubules is shown in Fig. 3 in which the ATPase rate is plotted versus microtubule concentration expressed as tubulin dimer concentration. The dependence fits a hyperbola with maximum rate of 60 s-1 at 20 °C and concentration for half-maximum rate, Km(Mt) of 5 µM in 10 mM NaCl. The Km(Mt) increased markedly with increasing ionic strength.


Fig. 3. Dependence on microtubule concentration of the steady state ATPase of K332 and the apparent rate constant of mant ADP dissociation. bullet , steady state ATPase, 0.5 µM K332, 5 mM Mg[gamma -32P]ATP. Curve is a hyperbola fitted to data points; Vmax = 60 s-1, Km(Mt) = 5 µM. Microtubule concentration is expressed as tubulin dimer concentration in all cases. open circle , rate constant for the decrease of fluorescence for the reaction of K332 mant ADP with microtubules plus ATP. The extrapolated maximum rate of 110 s-1 is the rate constant of mant ADP dissociation from the MtK332·mant ADP complex. Concentration at half-maximum rate of 24 µM is an estimate of the dissociation constant of K332·mant ADP from the initial MtK332·mant ADP complex: 1-2 µM K332·mant ADP, 5 mM MgATP. Conditions: standard buffer plus 10 mM NaCl, 20 °C.
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The binding of K332 to microtubules in the presence of MgATP or MgADP is shown in Fig. 4. The measurements were made by the sedimentation method using [3H]K332. The maximum binding fitted to an hyperbola is 0.8 of the total K332. In the presence of 0.5 mM AMPPNP, the binding is 0.9 which is taken to be complete binding. The remaining 10% appears to be impurities or inactive protein. Essentially 100% of the [3H]K332 that sedimented with microtubules was rebound in a second sedimentation experiment in the presence of ATP or AMPPNP.


Fig. 4. Binding of K332 to microtubules in the presence of ATP and ADP. Fractional binding of [3H]K332 was measured by the sedimentation assay. The smooth curves are hyperbolas fitted to data points. The extrapolated maximum binding is 0.8 (not corrected for approximately 10% impurities or inactive protein). The apparent dissociation constant is 9 µM in the presence of ATP and 16 µM for ADP. Conditions, 5 mM MgATP or MgADP, 0.25 µM [3H]K332, other conditions as in Fig. 3.
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The apparent dissociation constant in the presence of ATP is 9 µM while the equilibrium dissociation constant in the presence of ADP is 16 µM (in 10 mM NaCl plus 5 mM MgATP or MgADP which contributes an additional 20 mM to the ionic strength). The same trend in relative values was observed for the MtK379 dimer although the actual dissociation constants are 5 times smaller for the dimer at the same total ionic strength.

Nucleotide-free MtK332 was obtained by treatment with apyrase. The dissociation constant in 100 mM NaCl was 0.7 µM. Assuming the same ionic strength dependence of dissociation constants found for K379, the dissociation constant in 10 mM NaCl is roughly 0.06 µM. Therefore, the binding of ADP to K332 reduces the affinity for microtubules by about 250-fold.

Dissociation constants were measured for complexes of MtK332 with ADP·BeFx, ADP·AlF4, and ADP-vanadate. The values are given in Table I. The binding of the ADP-BeFx complex is slightly stronger than in the presence of ATP which is consistent with its being an analogue of an ATP state (12). However, the ADP-vanadate complex was more weakly bound than the ADP complex, while the ADP-AlF4 complex was very strongly bound yet both complexes have been proposed to be analogues of an ADP·P state (12, 13). Further studies to characterize these complexes are in progress.

Table I.

Rate and dissociation constants of MtK332

Vm, extrapolated maximum ATPase rate, Km(Mt), microtubule concentration at half-maximum rate (tubulin dimer concentration), Kd, dissociation constant (tubulin dimer concentration) in presence of ATP, ADP, ADP-AlF4, ADP-BeFx, ADP-vanadate. B, extrapolated maximum binding of K332 to microtubules; maximum binding in 50 mM NaCl + NaF ranged from 0.83 to 0.88. Data given as mean ± S.D. of three or four experiments. Conditions: standard buffer, 22 °C, NaCl or NaCl + 10 mM NaF as indicated, 1 mM AlCl3 or BeF2 or sodium vanadate.
Vm Km (Mt) Kd (ATP) B Kd (ADP) B

s-1 µM µM µM
10 mM NaCl 60  ± 2 5  ± 0.3 9  ± 0.5 0.88  ± 0.04 16  ± 1 0.88  ± 0.03
Kd
ADP ADP-AlF4 ADP-BeFx ADP-vanadate

µM
50 mM NaCl + NaF 22  ± 2 1  ± 0.1 7  ± 0.6 30  ± 4

Kinetic Studies of the ATPase Mechanism of MtK332

The mant ATP Binding Step

The rate of binding of mant ATP was measured at a high microtubule concentration and a low ionic strength such that the complex remans associated. The fluorescence signal fitted a single rate constant at low concentrations, but the rate was large, 150 s-1 at 5 µM mant ATP. At higher concentrations, the signal became biphasic, an increase followed by a decrease. The two rate constants are plotted in Fig. 5. The concentration dependence of the fluorescence increase, fitted to a hyperbola, had a maximum rate of about 700 s-1 and an intercept at zero concentration of approximately 100 s-1. The decrease phase was independent of concentration with a rate constant of 30 s-1.


Fig. 5. Concentration dependence of apparent rate constants for the binding of mant ATP to MtK332 complex. bullet , apparent rate constant for the increase in fluorescence; open circle , apparent rate constant for the decrease in fluorescence. Rising curve is the fit to a hyperbola, maximum rate 700 s-1, intercept 100 s-1, rate of decrease phase 35 s-1. Microtubule concentration is 12.5 µM for mant ATP concentrations less than 100 µM and 21.5 µM at 100 and 120 µM mant ATP. K332 concentration was varied from 1.5 to 20 µM. Conditions: standard buffer plus 10 mM NaCl, 20 °C.
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The Hydrolysis Step

The phosphate burst in 10 mM NaCl had a very large rate constant and small amplitude (Fig. 6). The system reached a steady state in 3 to 5 ms and the intercept, which defines the size of the phosphate burst, is 0.4 to 0.5 mol per site. Under these conditions, the system is largely associated and the steady state rate of 53 s-1 is nearly equal to the maximum value. The rate constant of the transient phase is too large to measure but it is greater than 250 s-1. The rate constant is determined by the rate of the hydrolysis step plus the rate of product release in reaching the steady state. To satisfy the equations for the steady state rate, burst size, and transient rate (2), the hydrolysis step must be at least 200 s-1.


Fig. 6. Phosphate burst phase of MtK332. Measurements were made in a quench flow apparatus; steady state rate was also measured by hand mixing on a longer time scale. Data are fitted to Pi = B(1 - exp(-lambda t)) + Vst. black-down-triangle , 10 mM NaCl, 15 µM tubulin dimer, 7.25 µM K332, 125 µM [gamma -32P]ATP. The steady state rate Vs is 52 s-1, transient rate constant lambda  is approximately 250 s-1, and the phosphate burst size B is 0.5 Pi/active site. bullet , 75 mM NaCl, 30 µM tubulin dimer, 15 µM K332, and 150 µM [gamma -32P]ATP. Vs = 15 s-1, lambda  = 50 s-1, and B = 1.1 to 1.2 Pi/active site. Error bars are range of duplicate measurements. Conditions: standard buffer, 20 °C.
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The transient phase of phosphate formation was also measured in 75 mM NaCl so that the complex is largely dissociated at the end of the transient. The results of a burst experiment are also plotted in Fig. 6. The steady state rate is 15 s-1, and the complex is 80 to 90% dissociated in the steady state based on a sedimentation measurement. The transient phase had a rate constant of 50 s-1. However, the size of the burst was greater than 1.

Variation of the ATP concentrations from 55 to 150 µM gave at most a 20% increase in the rate constant of the transient. The rate also did not increase more than 10% for variation in the microtubule concentration from 20 to 40 µM. The differences are within the error of fitting to one exponential plus a linear term. It is concluded that the maximum rate is in the range 50 ± 5 s-1.

The amplitude of the burst ranged from 1.1 to 2.0 in six experiments. A burst larger than 1 can only be explained by a processive mechanism.

Dissociation of MtK332 by ATP and ADP

The rate of dissociation of MtK332 by ATP and ADP was measured by the small decrease in light scattering. Mixing MtK332 with buffer generated a slow change with a rate in the 5 to 8 s-1 range and an amplitude equal to 25% of the change for complete dissociation of the complex. Measurements were limited to high substrate concentrations such that the rate of dissociation was much larger than the artifact. It was still necessary to use signal averaging to reduce the noise level. Light scattering transients are shown in Fig. 7 (in 50 mM NaCl). The maximum rate of dissociation is 65 to 90 s-1 by ADP and 40 to 50 s-1 by ATP. The rate increased slightly with ionic strength.


Fig. 7. Dissociation of MtK332 complex by ADP (A) and ATP (B). MtK332 complex, 2.5 µM tubulin dimer, 2 µM K332, 500 µM ADP or ATP (concentration after mixing). The jagged curve is the light-scattering signal at 295 nm, average of eight traces. The smooth curve is the fit to one exponential term. The rate constant is 84 s-1 for dissociation by ADP (A) and 39 s-1 for dissociation by ATP (B). Conditions: standard buffer plus 50 mM NaCl, 20 °C.
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Although the errors in rate constants are large, the experiments make two important points. First, the rate of dissociation by ADP is significantly larger than the rate of dissociation by ATP. Second, the rate of dissociation by ATP is approximately equal to the rate of the transient phase of phosphate formation at the same ionic strength. This relatively slow dissociation prolongs the transient phase, and more than one ATP is hydrolyzed before the steady state is attained. Thus, the MtK332 monomer has a small processivity.

The mant ADP Dissociation Step

The rate of mant ADP dissociation from a MtK332·ADP complex was measured by reacting the K332·mant ADP complex with microtubules plus a high concentration of ATP to block rebinding. The fluorescence signal for mant ADP dissociation fitted a single exponential term, and the values are plotted versus microtubule concentration in Fig. 3. Extrapolation, assuming an hyperbolic dependence on microtubule site concentration, gave a rate of 110 s-1 for the dissociation of mant ADP from the MtK·mant ADP complex. The concentration at half-maximum rate is 24 µM in 10 mM NaCl which is 50% larger than the equilibrium dissociation constant. For a two-step reaction,
<UP>Mt</UP>+<UP>K</UP> · <UP>ADP* </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP></LIM><UP> MtK</UP> · <UP>ADP* </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP></LIM><UP> MtK</UP>+<UP>ADP</UP>
REACTION 1

where the asterisk denotes a state of enhanced fluorescence, a hyperbola would fit the results if the first step were in rapid equilibrium relative to the second step. This condition is probably not met because of the large rate constant of dissociation of the mant ADP. A Scatchard plot exhibited some curvature indicating that the maximum rate may be overestimated. However, the observed rate is as large as 80 s-1, and the extrapolated value is at least 100 s-1. The corresponding experiment for MtK379 gave a value of 30 to 35 s-1 (2). The rate of dissociation of mant ADP is about 50% larger than the maximum steady state rate of MtK332 and the same correlation holds for MtK379 and also for microtubule-ncd (nonclaret disjunction) (14).

Binding of mant ADP to MtK332

The binding of mant ADP to MtK332 gave a signal of much smaller amplitude at low nucleotide concentrations compared to mant ATP and a very large rate of increase in fluorescence (>300 s-1 at 5 µM mant ADP). The transient fitted one exponential term. The rate constant increased with mant ADP concentration (Fig. 8, in 10 mM NaCl) and appeared to be reaching a maximum value of about 700 s-1. The limiting rate at zero concentration is approximately 300 s-1. For a one-step reaction,
<UP>MtK</UP>+<UP>ADP </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP></LIM><UP> MtK</UP> · <UP>ADP</UP>
REACTION 2


Fig. 8. Concentration dependence of apparent rate constant for the binding of mant ADP to MtK332 complex. The maximum rate fitted to a hyperbola is approximately 700 s-1, and the intercept at zero concentration is 300 s-1. Microtubule concentration is 12.5 µM for mant ADP concentrations less than 60 µM and 22.4 µM at 80 and 100 µM mant ADP; K332 concentration was varied from 2 to 20 µM. Conditions: standard buffer plus 10 mM NaCl, 20 °C.
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with rate constants ka and kd in the forward and reverse directions, the intercept as [ADP] approaches zero is kd, the rate constant of ADP dissociation. The value is significantly larger than the rate constant determined in the mant ADP release experiment (Fig. 3).

At higher ionic strength (50 mM NaCl), the fluorescence transient fitted two exponential terms, a very large rate of increase followed by a slower increase in fluorescence of 10 to 20% of the total, after correction for loss of the fast signal in the dead time. In this case, the complex is partly dissociated by mant ADP. The second step reached a rate of 60 to 70 s-1 which is equal to the rate of dissociation measured by light scattering. Therefore, the additional signal arises from dissociation of K·ADP which binds the substrate with much higher affinity.

A second type of experiment supported the conclusion that the rate constant of mant ADP dissociation is very large. At a high microtubule concentration, MtK332 is largely associated in the presence of mant ADP. The dissociation constant of mant ADP in this complex is expected to be 20 to 30 µM. The reaction of MtK332·mant ADP with a large excess of ATP should provide a measurement of the rate of mant ADP dissociation. The fluorescence transient is shown in Fig. 9 (20 µM K332, 20 µM mant ADP, 75 µM tubulin dimer, concentrations before mixing one to one with 1 mM ATP). More than half of the amplitude of the signal (corrected for signal loss during the dead time) corresponds to a very fast step with rate constant of 400 s-1. The slower process, with a rate constant of 13 s-1, is attributed to the presence of some dissociated K332·mant ADP which must bind to microtubules before release of the mant ADP. The experiment demonstrates that at equilibrium, at least part of the bound mant ADP is present in a complex with a very large rate constant of dissociation.


Fig. 9. Time course of the dissociation of mant ADP from an equilibrium complex of MtK332·mant ADP. The complex formed from 20 µM K332, 20 µM mant ADP, and 75 µM microtubules was mixed one to one with 1 mM MgATP. The jagged curve is the fluorescence signal for the dissociation of mant ADP; the smooth curve is the fit to two exponential terms with rate constants of 400 s-1 and 13 s-1. Conditions: standard buffer plus 10 mM NaCl, 20 °C.
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DISCUSSION

The objective of this study is to formulate a kinetic scheme
<UP>MtK</UP>+<UP>ATP </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><LL>k<SUB>−1</SUB></LL><UL>k<SUB>1</SUB></UL></LIM><UP> </UP><UP>MtK</UP> · <UP>ATP </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><UL>k<SUB>2</SUB></UL></LIM><UP> </UP><UP>MtK</UP> · <UP>ADP</UP> · <UP>P </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><UL>k<SUB>3(<UP>−P</UP>)</SUB></UL></LIM><UP> </UP><UP>MtK</UP> · <UP>ADP </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><LL>k<SUB><UP>−4</UP></SUB></LL><UL>k<SUB>4</SUB></UL></LIM><UP> </UP><UP>MtK</UP>+<UP>ADP</UP>
⥮                     ¦                        ¦                           ⥮k<SUB><UP>dis</UP></SUB>                              ⥮
<UP>K</UP>+<UP>ATP   </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><LL>k<SUB><UP>−1′</UP></SUB></LL><UL>k<SUB>1′</SUB></UL></LIM><UP> </UP><UP>K</UP> · <UP>ATP   </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><UL>k<SUB>2′</SUB></UL></LIM><UP> </UP><UP>K</UP> · <UP>ADP</UP> · <UP>P   </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><UL>k<SUB>3′(<UP>−P</UP>)</SUB></UL></LIM><UP> </UP><UP>K</UP> · <UP>ADP   </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><LL>k<SUB><UP>−4′</UP></SUB></LL><UL>k<SUB>4′</SUB></UL></LIM><UP> </UP><UP>K</UP>+<UP>ADP</UP>
<SC><UP>Scheme</UP></SC><UP> 2</UP>

for a monomeric kinesin (K332). In the absence of microtubules, the rate constants for K332 are very similar to dimeric K379 and whole kinesin prepared from bovine brain (1, 10). The removal of the 47 amino acid residues, which stabilize the motor as a dimer complex, appear to have little or no effect on the steps of substrate binding, hydrolysis, and release of reaction products.

The data are analyzed in terms of the simple kinetic scheme proposed for dimeric K379 (Scheme 2).

The first step in mant ATP or mant ADP binding, the formation of a rapid equilibrium complex, is omitted for simplicity; k1, k1' and k-4, k-4' are the first order rate constants for the transition induced by nucleotide binding.

Measurements were made at 10 mM NaCl to obtain rate constants for transitions between MtK states because the MtK332 complex is partly dissociated at higher ionic strengths. The maximum observed rates for the first order transition for the binding of mant ATP are approximately 350 s-1 for K332 and 700 s-1 for MtK332. In part, the increase in rate constant arises from an increase in k-1, but the value of k1 is probably larger than k1'. The maximum rate for mant ADP binding is also twice as large for MtK332 compared to K332, and, as discussed below, the increase in rate is caused mainly by the large rate of dissociation of mant ADP. The rate of hydrolysis (step 2) is increased from 7 s-1 to at least 200 to 250 s-1 by binding to the microtubule and the rate of dissociation of mant ADP is increased from 0.02 s-1 to greater than 100 s-1.

The irreversible steps 3 and 4 are equivalent to an effective rate ke = k3k4/(k3 + k4). To obtain a steady state rate of 50 to 60 s-1, the values assigned to the rate constants of the first two steps require ke to be 70 to 100 s-1. The intercept at zero concentration for the rate of binding of mant ATP is a measure of ke (2), and the value is approximately 100 s-1 (Fig. 5). A difficulty arises in assigning values to the individual rate constants k3 and k4. The only direct measurement of k3 is the report that the rate of phosphate dissociation for a dimeric kinesin complex (Drosophila K401) is comparable to the steady state rate (4).

Two kinds of experiments were done to estimate k4, but the results did not agree. The extrapolated maximum rate of mant ADP dissociation from the reaction of K·ADP with microtubules is 110 s-1. The rate of mant ADP binding to MtK extrapolated to zero concentration (Fig. 8), and the dissociation of mant ADP from an equilibrium MtK·ADP complex (Fig. 9) gave approximately 300 s-1. For the simple kinetic scheme, both experiments should measure k4, and the discrepancy is larger than expected from experimental errors.

A reasonable explanation is that there are two MtK-ADP states. The initial complex formed by K·ADP with the microtubule is weakly bound, but it undergoes a transition to a more strongly bound state followed by rapid dissociation of ADP. This complication will be discussed later. In terms of the simple scheme, the effective rate of ADP dissociation in the cycle lies between the values obtained in the two experiments or roughly 200 s-1. Rate constants k3 and k4 are similar in magnitude in the scheme.

Pathway of Dissociation

The important problem is to determine which state or states dissociate in the reaction cycle. The simple scheme with one MtK·ADP state is satisfactory for the discussion of this question. The rate of dissociation of the MtK332 complex by ATP is 40 s-1 in 50 mM NaCl and probably smaller in 10 mM NaCl while the rate of the hydrolysis step is at least 200 s-1. Therefore, the reaction reaches the MtK·ADP·P state before dissociation. The dissociation constant and the rate of dissociation for the MtK·ADP·P state are not known. The state formed with ADP·AlF4 has been considered to be an analogue of ADP·P (12), and the binding is much stronger than in the presence of ADP (13, 14 and Table I). The ADP·vanadate state may be a better analogue of ADP·P in the case of myosin (15), and it is more weakly bound than the MtK·ADP state. Further studies are needed to determine the significance of the findings with these analogues. The ADP state (or states) dissociate with an effective rate constant of 75 ± 10 s-1.

The finding of a phosphate burst of more than 1 mol/mol of sites provides evidence for the dissociation pathway. The size of the phosphate burst is 0.4 to 0.5 for conditions such that the system remains associated which agrees with the value calculated from the rate constants and steady state rate (equations are given in Ref. 2). At higher ionic strength (75 mM NaCl) under conditions that the system is largely dissociated in the steady state, the rate constant of the burst is only 40 to 50 s-1 which is equal to the rate of dissociation by ATP. and the size of the burst was as large as 2 mol per site. The excess of the burst over the value expected from the hydrolysis step is termed the extra burst.

The significance of the extra burst is made clear by considering two possible reaction pathways. In the first case, the rate of dissociation of MtK·ADP·P is assumed to be much smaller than the rate of phosphate release (k3); consequently, only the MtK·ADP state dissociates in the cycle. The rate constants assigned to steps 1 through 4 and kdis define a model which can be simulated using KINSIM. In the limit of nearly complete dissociation in the steady state, the extra burst is approximately k4/kdis, and, since the ratio of the rate constants is approximately 2, this pathway accounts for the extra burst. Furthermore, the rate of dissociation of MtK by ATP is equal to the rate of the extra burst.

In the second case, the rate of dissociation of MtK·ADP·P is taken to be large compared with k3. In the limit of complete dissociation, there is no extra burst. It is concluded that the main pathway is dissociation (and rebinding) of the MtK·ADP state. Some dissociation of MtK·ADP·P may occur, but this step reduces the size of the extra burst. Thus, even a monomer shows a small processivity in that more than one ATPase cycle can occur before reaching the steady state level of dissociation. Jiang and Hackney (16)2 obtained a burst of at least 2 mol per site for a monomeric kinesin and also concluded that the size of the extra burst is a measure of processivity.

Gilbert et al. (4) considered two kinetic pathways. Although their studies were made with a dimeric kinesin, the kinetic scheme is presented in terms of a single head. They favor a mechanism in which the dissociation of MtK·ADP·P is the rate-limiting step and phosphate dissociation occurs from the K·ADP·P state. Because this model cannot account for the extra burst, it is incorrect when applied to a monomer. Their second model makes phosphate dissociation from MtK·ADP·P the rate-limiting step, and the model includes two MtK-ADP states although evidence for two states was not given. Thus, their second model is similar to the one proposed here.

Problem of Two MtK·ADP States

The rate constants for a two-step reaction are not uniquely determined by the data. Simulation using KINSIM gave an approximate fit to the results for the two ADP release experiments and the rate of dissociation of MtK by ADP for the following scheme:
<UP>K</UP> · <UP>ADP</UP>+<UP>Mt </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><LL><UP>>300 s<SUP>−1</SUP></UP></LL></LIM><UP> Mt<SUB>w</SUB>K</UP> · <UP>ADP </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><LL>150 <UP>s<SUP>−1</SUP></UP></LL><UL>300 <UP>s<SUP>−1</SUP></UP></UL></LIM><UP> Mt<SUB>s</SUB>K</UP> · <UP>ADP </UP><LIM><OP><ARROW>&rlhar2;</ARROW></OP><UL>300 <UP>s<SUP>−1</SUP></UP></UL></LIM><UP> </UP>
MtK+<UP>ADP</UP>
REACTION 3

Two different rate constants in the two experiments would only be observed if the equilibrium between ADP states favors MtsK·ADP. The two-step fluorescence signal for the binding of mant ADP to K332 and other kinesin constructs provides some evidence for two ADP states. Simulation of the ATPase cycle with two ADP states showed that the value of ke of 100 s-1 was consistent with the rate constants assigned to the ADP release steps and a phosphate dissociation rate of 150 s-1 to 200 s-1. Two ADP states have also been reported for myosin S-1 and actomyosin (17, 18).

The microtubule kinesin mechanism has been described as alternating between a weak and a strongly bound state much like the actomyosin mechanism (13). The weakly bound MtwK·ADP state has a dissociation constant of 20 µM based on the concentration dependence of the rate of mant ADP release (Fig. 3). The dissociation constant of the more strongly bound state is not known, but it is expected to be much larger than the value for nucleotide-free kinesin. The proposal that a weak to strong transition is necessary for ADP release is relevant to the problem of head interactions in the microtubule-kinesin dimer complex (19).


FOOTNOTES

*   This work was supported by National Institutes of Health Grant GM 51858. The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Dagger    To whom correspondence should be addressed: The University of Chicago, 920 E. 58th Street, Chicago, IL 60637. Tel.: 312-702-1660; Fax: 312-702-3172.
1    The abbreviations used are: K332, K379, K349, and K401, kinesin constructs of 332, 379, 349, and 401 amino acid residues; AMPPNP, 5'-adenylyl beta ,gamma -imidodiphosphate; mant ATP and mant ADP, 2'-(3')-O-(N-methylanthraniloyl) adenosine 5'-triphosphate and -diphosphate, respectively; 3'-deoxy,2'-mant ATP, 2'-O-(N-methylanthraniloyl),3'-deoxyadenosine 5'-triphosphate; PIPES, 1,4-piperazinediethanesulfonic acid; Mt, microtubule.
2    W. Jiang and D. D. Hackney, personal communication.

Acknowledgment

We thank Aldona Rukuiza for expert technical assistance.


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