(Received for publication, August 31, 1995; and in revised form, December 19, 1995)
From the
A protein, p33/41, expressed in bovine kidney and many other tissues was identified as a lectin which binds to sialoglycoproteins and glycosaminoglycans in a calcium-dependent manner. Partial amino acid sequences of p33/41 are highly homologous to those of a calcium/phospholipid-binding annexin protein, annexin IV (endonexin). p33/41 exhibited similar calcium-dependent phospholipid binding activity (Kojima, K., Ogawa, H., Seno, N., Yamamoto, K., Irimura, T., Osawa, T., and Matsumoto, I. (1992) J. Biol. Chem. 267, 20536-20539). To further characterize p33/41, we cloned the p33/41 cDNA and characterized the recombinant protein encoded by this cDNA. Oligonucleotide probes were synthesized based on partial amino acid sequences of p33/41 and used for screening. A p33/41 cDNA clone was isolated encoding a protein of 319 amino acids with a calculated molecular mass of 35,769 Da. The deduced amino acid sequence was identical to that of bovine annexin IV except for one amino acid substitution. The recombinant protein gave two 33-kDa (p33) and 41-kDa (p41) bands on SDS-polyacrylamide gel electrophoresis under non-reducing conditions, and only one 33-kDa band under reducing conditions, as did the native protein. Mass spectrometric analysis combined with site-directed mutagenesis of each of the four cysteine residues of the recombinant protein revealed that p41 is a dimer of p33 cross-linked at Cys-198 via a disulfide bond. The recombinant protein bound to columns of heparin and fetuin glycopeptides in a calcium dependent manner and to phospholipid vesicles composed of phosphatidylserine (PS)/phosphatidylcholine (PC), phosphatidylethanolamine (PE)/PC or phosphatidylinositol (PI)/PC. Furthermore, concurrent binding assays showed that the binding of the recombinant protein to phospholipid vesicles was not affected by heparin, whereas that to heparin was influenced by the phospholipid composition of the vesicles; the highest binding was observed with vesicles composed of PE/PC. These results suggest that p33/41 binds two types of ligands via different sites and that phospholipids modulate the carbohydrate binding activity of p33/41.
Various proteins have been found to interact with specific carbohydrate structures on selected glycoconjugates to perform their physiological functions. Many carbohydrate-binding proteins (lectins) have been identified in various contexts, both as a result of direct searches for proteins with selective carbohydrate binding activity, and in the course of investigations on biological recognition processes. In many cases, the physiological roles of lectins have been ascribed to biological recognition events. The list of lectin-mediated processes includes diverse biological phenomena, such as protein clearance from circulating bloods, phagocytosis, intracellular routing of glycoproteins, and cell to cell adhesion(1, 2, 3, 4, 5, 6) .
We have purified a calcium-dependent carbohydrate-binding protein,
p33/41, from bovine kidney extracts by successive affinity
chromatography on fetuin- and heparin-Sepharose(7) . Upon
SDS-polyacrylamide gel electrophoresis (SDS-PAGE), ()the
protein gave unique doublet bands corresponding to 33-kDa (p33) and
41-kDa (p41) proteins under non-reducing conditions. Under reducing
conditions, the 41-kDa protein disappeared and only the 33-kDa protein
was detected, suggesting that p41 is produced from p33. Therefore, the
protein was termed, tentatively, p33/41. Immunoblot analysis of bovine
tissue extracts revealed that p33/41 is expressed not only in the
kidney but also in the liver, pancreas, and several other
tissues(8) . Immunohistochemical study of bovine kidney
specimen showed that p33/41 is highly concentrated in the apical plasma
membrane of the epithelial cells in the renal proximal tubules, and the
results of sequential extraction with EDTA and Triton X-100 and phase
transfer analysis with Triton X-114 suggested that p33/41 is integrated
into the renal brush border membrane(9) . To obtain information
on its primary structure, we determined the amino acid sequence of the
peptides derived by proteolysis of p33/41. The results demonstrate that
partial amino acid sequences of p33/41 are strikingly homologous to
those of annexin IV (8) , one of the annexin family of
proteins.
The annexins, which bind to phospholipids and membranes in
the presence of calcium, comprise some 13 members expressed in diverse
organisms such as higher plants, slime molds, metazoans, insects,
birds, and mammals. Annexins are amphipathic and distinct from soluble
and integral membrane proteins, but share features of
both(9, 10, 11) . These proteins consist of
four or eight conserved repeating units of 70-80 amino acids, 17
of which are conserved in each unit. In contrast, the N-terminal
segment of the annexin family of proteins exhibits the greatest
variation in sequence and length. These proteins are claimed to have a
wide range of biological functions related to their
phospholipid/membrane-binding properties(12) . They are
anti-inflammatory proteins that inhibit phospholipase A activity in vitro by sequestering the substrate
phospholipids from phospholipase A
(13) .
Furthermore, the annexins exhibit anti-coagulant activity(14) ,
calcium channel activity (15) , and cyclic phosphate
phosphohydrolase activity(16) . They function in the membrane
fusion process, exocytosis(17) , endocytosis,
membrane-cytoskeleton interactions(18) , and regulation of
calcium-dependent anion current activation(19) .
In addition to its amino acid sequence homology to annexin IV, p33/41 exhibited calcium-dependent phospholipid binding activity. These two characteristics alone suggest that the two proteins p33/41 and annexin IV might be related or identical; however, their relationship has remained uncertain. For example, although most of the partial amino acid sequences obtained from p33/41 corresponded well to those of annexin IV, several did not. Annexin IV is a 32-kDa protein, and there has been no description of it as a doublet protein corresponding to 33 and 41 kDa. Annexin IV has not been identified as a lectin, and its biological functions have not been reported to be based on carbohydrate-binding properties. Although p33/41 can interact with two different types of ligands, carbohydrate and phospholipid, the influence of binding to one ligand on its affinity for the other ligand remains unclear. In the present study, we cloned a p33/41 cDNA by screening with oligonucleotide probes corresponding to partial amino acid sequences of p33/41. This cDNA was used to produce a recombinant protein in Escherichia coli that was characterized to obtain information on the carbohydrate and phospholipid binding properties of p33/41.
The coding region of the cDNA subcloned into M13mp18 was amplified by the polymerase chain reaction (PCR) using an upstream primer (primer N: 5`-CGGGATCCCCGCAGCCAAGGGAGG-3`) and a downstream primer (primer C: 5`-TTCGAATTCTGGATTTTAATCATC-3`) containing BamHI and EcoRI restriction sites, respectively. The PCR-generated DNA was digested with EcoRI and BamHI, and the product was ligated into the BamHI and EcoRI sites of plasmid pGEX-3X and then used to transform E. coli HB101. The recombinant fusion protein produced in E. coli was induced by adding IPTG and purified on glutathione-Sepharose. After digestion with proteinase factor Xa at a specific cleavage site, the recombinant protein was separated from glutathione S-transferase and obtained in the flow-through fraction from the glutathione-Sepharose column.
Silent changes were introduced into each primer in order to generate or delete restriction sites to facilitate identification of the mutant introduced. By use of individual primer pairs, 657-, 387-, and 256-base pair fragments corresponding to C108S, C198S, and C242L mutants, respectively, were amplified by PCR from the p33/41 cDNA. After chloroform-phenol extraction and ethanol precipitation, the reaction products were used as downstream primers for the next PCR. An amplification was performed from the bovine p33/41 cDNA subcloned into pGEX-3X using primer N as the upstream primer. Mutagenized partial cDNA for the C315S mutant was amplified from the p33/41 cDNA subcloned into M13mp18 using of primer N as the upstream primer and the following downstream primer.
The reaction products were digested with EcoRI and BamHI and then purified by agarose gel electrophoresis. Each mutagenized cDNA fragment was ligated into plasmid pGEX-3X for expression in E. coli HB101. The mutations were checked by examining altered restriction sites introduced by the primers and by full-length sequencing of the final plasmid constructs.
Figure 1: Nucleotide and predicted amino acid sequences of the cDNA for p33/41. Amino acid sequences determined in our previous study (8) are indicated by the dashed lines, and unidentifiable or different amino acids are denoted by X. Asparagine residues of potential N-glycosylation sites are indicated by &cjs1219;, and the terminal codon is denoted by an asterisk. The cDNA sequence for p33/41 is 99% identical to that for endonexin (bovine annexin IV) determined by Hamman et al.(24) . The differences in nucleotides and deduced amino acids between p33/41 and annexin IV are underlined.
The cDNA was subcloned into the E. coli expression vector pGEX-3X, and a recombinant fusion protein with glutathione S-transferase (26 kDa) was prepared. It was necessary to add EDTA to the buffer for sonication of E. coli cells to solubilize the recombinant fusion protein. Approximately 2 mg of the recombinant protein was purified from 1 liter of culture by column chromatography on glutathione-Sepharose. The fusion protein gave two protein bands, corresponding to 57- and 62-kDa proteins, on SDS-PAGE under non-reducing conditions and one band, corresponding to a 57-kDa protein, under reducing conditions (data not shown). After digestion of the fusion protein with proteinase factor Xa at a specific cleavage site, the recombinant protein was purified by a second chromatography on glutathione-Sepharose. Because of the location of the cleavage site for factor Xa and the introduction of a BamHI site, three extra amino acids (Gly-Ile-Pro) were present at the N terminus of the recombinant protein. Actually, the N-terminal amino acid sequence of the recombinant protein was determined to be Gly-Ile-Pro-Ala-Ala-Lys-Gly-Gly-Thr-Val-Lys-Ala-Ala-SerGly-Phe-Asn-Ala-Ala.
The results of SDS-PAGE analysis are shown in Fig. 2. Under non-reducing conditions, the recombinant protein also gave two protein bands with apparent molecular masses of 33 and 41 kDa, whereas only one protein band of 33 kDa was obsedved under reducing conditions. These results are in good agreement with those reported for native p33/41 and demonstrate that the 33- and 41-kDa proteins were both produced from a single cDNA of the isolated clone. When the recombinant protein was electrophoretically transferred to a PVDF membrane after SDS-PAGE and then probed with polyclonal anti-p33/41 antibodies, both the 33- and 41-kDa bands were stained. The identity of the recombinant protein with p33/41 was, thus, also supported immunologically.
Figure 2: SDS-PAGE and immunoblotting of native p33/41 and the recombinant protein. The migration patterns on SDS-PAGE of native p33/41 isolated from bovine kidneys (lane N) and the recombinant protein produced from cloned cDNA (lane R) are shown together with their immunoreactivity. The recombinant fusion protein with glutathione S-transferase was digested with proteinase factor Xa, loaded onto an 11% acrylamide gel, and then electroblotted onto a PVDF membrane. Proteins were stained with Coomassie Brilliant Blue (CBB) and allowed to react with polyclonal anti-p33/41 antibodies (immuno). The values on the left indicate the migration positions of the molecular weight markers. A, non-reducing conditions (2% SDS). B, reducing conditions (2% SDS and 25 mM dithiothreitol).
Native p33/41 was
initially purified from a bovine kidney extract by calcium-dependent
two-step affinity chromatography on fetuin-Sepharose and
heparin-Sepharose. As shown in Fig. 3, the recombinant protein
bound to fetuin glycopeptide-Sepharose as well as to heparin-Sepharose
in the presence of 5 mM CaCl and was eluted by
chelating the calcium ions with 2 mM EDTA. When chromatography
was performed in the presence of 5 mM EDTA, the recombinant
protein did not bind either fetuin glycopeptide-Sepharose or
heparin-Sepharose, indicating that the binding is calcium-dependent.
When the recombinant protein was applied to an asialofetuin
glycopeptide-Sepharose column, the protein was not retained on the
column but was recovered in the flow-through fraction, suggesting that
terminal sialic acids are required for the binding to fetuin
glycopeptides. In addition, the recombinant protein was confirmed to be
capable of binding to phospholipids in the presence of calcium
(mentioned in detail below). Taken together, our data demonstrated that
the recombinant protein produced from isolated cDNA possesses all the
characteristics of p33/41; therefore, we concluded that the cDNA
encodes p33/41.
Figure 3:
Binding of the recombinant protein to
columns of Sepharose coupled to fetuin glycopeptides (Fetuin),
asialofetuin glycopeptides (Asialofetuin), and heparin (Heparin) in the presence of 5 mM CaCl (solid line) or 2 mM EDTA (dotted
line). Approximately 20 µg of the recombinant protein was
applied to each column. The proteins adsorbed in the presence of 5
mM CaCl
were eluted with 2 mM EDTA and
monitored by ELISA using polyclonal anti-p33/41
antibodies.
Figure 4: Doublet formation of four cysteine mutants of p33/41. Four cysteine mutants (C108S (lane 1), C198S (lane 2), C242L (lane 3), and C315S (lane 4)) and the wild type (lane W) of p33/41 were loaded onto a 9.5% acrylamide gel under non-reducing (A) or reducing conditions (B), electroblotted onto a PVDF membrane, and then immunostained with polyclonal anti-p33/41 antibodies.
Figure 5:
MALDI-TOF mass analysis of wild type
p33/41 and the cysteine mutant C198S. Mass spectra were obtained from
wild type (A) and the C198S mutant (B) of p33/41 by
MALDI-TOF mass analysis under non-reducing conditions. A,
three peaks from wild type p33/41 correspond to one doubly charged (M
+ 2H) and two singly charged (M +
H)
molecular ions at m/z 18,039, 36,074, and
72,200, respectively. B, one peak from C198S mutant of p33/41
corresponds to singly charged (M + H)
molecular
ion at m/z 36104.
Recombinant p33/41 was incubated with phospholipid vesicles and then centrifuged. Recombinant p33/41 co-precipitated with the phospholipid vesicles was released up on the addition of EDTA, and the released protein was immobilized on a plastic plate and detected by ELISA. As shown in Fig. 6, rec-p33/41 bound to phospholipid vesicles composed of PE/PC, PI/PC, and PS/PC in dose-dependent manner, with similar half-maximal concentrations of around 10 µg/ml. Even high concentrations of heparin (1 mg/ml) did not influence the binding, suggesting that heparin does not compete with phospholipid at its binding sites on rec-p33/41.
Figure 6: Phospholipid binding activity of rec-p33/41 in the presence of heparin. Phospholipid vesicles (PE/PC, PI/PC, and PS/PC) were incubated with varying amounts of rec-p33/41 in the presence (dotted line) or absence (solid line) of heparin (1 mg/ml). The proteins bound were released by the addition of 2.5 mM EDTA and monitored by ELISA using polyclonal anti-p33/41 antibodies. The numbers on the abscissa indicate the ratio of rec-p33/41 to phospholipids (w/w).
Figure 7:
Heparin binding activity of rec-p33/41
associated with phospholipid vesicles. Phospholipid vesicles (PE/PC (circles), PI/PC (triangles), and PS/PC (squares)) were incubated with varying amounts of rec-p33/41
and then centrifuged. Recombinant p33/41 coprecipitated with
phospholipids was allowed to react with HRP-heparin, followed by
centrifugation. The amount of HRP-heparin released from rec-p33/41 by
the addition of 2.5 mM EDTA was monitored by development with
OPD and HO
. The numbers on the abscissa indicate the ratio of rec-p33/41 to phospholipids
(w/w).
In a previous study, we determined the amino acid sequence of 14 peptides derived by proteolysis of p33/41(8) . Eleven of the 14 sequences corresponded to those of annexin IV, whereas three peptide sequences did not. This striking sequence similarity between p33/41 and annexin IV suggested that the two proteins might be identical. Alternatively, p33/41 might consist of a segment of the annexin IV polypeptide and some additional peptide fragments. To prove the identity of p33/41, we isolated cDNA clones for p33/41 and characterized the resultant recombinant protein by biochemical analyses. Based on the results described herein, we concluded that p33/41 is identical to annexin IV. We screened a bovine liver cDNA library with oligonucleotide probes corresponding to the partial amino acid sequences of p33/41. Five positive cDNA clones, having different lengths but identical sequences, were obtained during the library screening. The amino acid sequence deduced from the cloned cDNA is identical to that deduced from bovine annexin IV cDNA, except for one amino acid substitution. As was observed for the p33/41 purified from bovine tissues, the recombinant protein produced from the cloned cDNA showed two forms, p33 and p41, on SDS-PAGE under non-reducing conditions. The recombinant protein exhibited both carbohydrate- and phospholipid binding activities in the presence of calcium, indicating that functional domains essential for the expression of binding activities toward two different types of ligands reside within the amino acid sequence deduced from the cloned cDNA. The inconsistency of the three non-corresponding sequences we reported before might be explained by the possibility that other proteins or peptides were present as contaminants during the protein or peptide purification steps.
Annexin IV (also called endonexin, protein II, chromobindin 4, placental anticoagulant protein II, and PP4-X) is one of a family of proteins that interact with phospholipids in the presence of calcium. In this study, we found that annexin IV has the additional unique property of recognizing carbohydrates. Calcium-dependent phospholipid binding activities are common and characteristic properties of the annexin family proteins. Phospholipids are suggested to bind via hydrophilic head groups to annexins, and the phospholipid-binding region is proposed to be localized on the convex surface side where calcium-binding sites are located in the crystal structure of annexin V(25) . It is noteworthy that the carbohydrate binding activity of p33/41 is modulated by association with phospholipid vesicles and that the effect varies with the phospholipid species; p33/41 associated with PE/PC vesicles is capable of responding to carbohydrate ligands whereas association with PI/PC or PS/PC vesicles decreased the carbohydrate binding activity. Proteins of the annexin family bind indiscriminately to every membrane fraction in cell-free systems, whereas, in intact cells, these proteins are localized along a specific domain of the plasma membrane and are associated with a restricted compartment. The limiting membrane may serve as a site at which p33/41 plays a functional role by expressing its carbohydrate binding activity.
Animal lectins have been classified into groups based on
shared sequence characteristics. While the overall structure of lectins
varies widely, their carbohydrate binding activity is ascribed to a
limited portion of a given lectin. This active segment is designated as
the carbohydrate recognition domain (CRD), and the CRDs in each group
share a pattern of invariant and highly conserved amino acid residues.
Three major groups of animal lectins, the C, S, and P-types, contain
CRDs with a distinct CRD motif. The lectins in each group share certain
functional properties beyond their amino acid sequence similarity.
C-type lectins require calcium ions for expression of their
carbohydrate binding activity and bind to a diversity of carbohydrates.
S-type lectins (galectins) are all -galactoside-specific and often
depend on reducing agents for their full activity. P-type lectins
recognize mannose 6-phosphate and function in intracellular targeting
of lysosomal enzymes(26) . p33/41 does not contain any of the
consensus sequences conserved in the CRDs of any animal lectins known
so far. Furthermore, consensus heparin-binding motifs (such as
BXBXBXXXXB)(27) , previously
identified glycosaminoglycan-binding sequences, or notably basic amino
acid cluster regions capable of binding to acidic polysaccharides
through simple ionic interaction were not observed within the primary
sequence of p33/41, suggesting that p33/41 may contain a unique CRD.
Mapping of the amino acid residues important for carbohydrate
recognition is one of the ways to understand the molecular basis of the
carbohydrate binding ability of p33/41.
In a series of experiments, the carbohydrate binding activity of p33/41 was examined with fetuin and heparin as carbohydrate ligands, because the detailed carbohydrate binding specificity remains uncertain. Our previous study showed that the binding of p33/41 to fetuin was inhibited by thyroglobulin, which has triantennary N-linked complex-type sialooligosaccharides, but not by transferrin, which only has biantennary N-linked complex-type sialooligosaccharides (7) . Mucin-type glycoproteins having large amounts of terminal sialic acid residues such as bovine submaxillary mucin, however, did not inhibit the binding of p33/41 to fetuin(7) . These results suggest that p33/41 preferentially recognizes the sialyl residues on triantennary N-linked oligosaccharides of glycoproteins. Since p33/41 exhibits significant binding activity toward heparin or heparan sulfate, it may function as a receptor for some proteoglycans. The next problems to be solved are to determine the biological processes in which p33/41 participates and the endogenous carbohydrate ligands for p33/41 under physiological conditions.
Because most carbohydrate chains on glycoconjugates are localized on the outer surface of plasma membrane or on the outside of cells rather than in the cytoplasm, p33/41, annexin IV, have to be expressed on the cell surface or secreted extracellularly to interact with carbohydrate ligands. Previously, annexins had been considered to be primarily intracellular proteins and to be neither secreted from cells nor expressed on the cell surface, as predicted from the lack of hydrophobic N-terminal signal sequences in their cDNA-deduced amino acid sequences. Therefore, studies on their physiological functions have been mainly focused on intracellular events, such as endocytosis, exocytosis, and intracellular trafficking. However, recent studies have shown that annexins are actually exported from cells and expressed on the cell surface. Annexin I is selectively secreted by the ductal epithelium of the human prostate (28) and by inflammatory cells(29) , and the export and expression of annexin II have been suggested in colon adenocarcinoma cells(30) , large-cell lymphoma cells(31) , chondrocytes(32) , and endothelial cells(33) . Annexin V, which was also identified as a collagen-binding protein, anchorin CII, was shown to be secreted and present in plasma, amniotic fluid, and post-culture medium(34) . There is much emerging evidence that both annexin I and annexin V can bind to many types of cell surfaces(35, 36, 37, 38, 39, 40) , and the identification of annexins as new receptors of tissue plasminogen activator in human endothelial cells (41) and of influenza virus in cultured cells (42) implies functional expression of annexins on the cell surface. With regard to annexin IV, there is conflicting evidence with different cells. It was reported that annexin IV is synthesized in human prostate gland cells but not secreted by the cells(28) , while it is expressed on the external surfaces of human and rodent tumor cells (30, 31) . The specific extracellular transport and expression mechanisms of annexins have not yet been defined.
The results of this study revealed that p33 is a monomer form of annexin IV, and p41 is a homodimer cross-linked via a single disulfide bond at Cys-198. Annexin II interacts with p11 protein via the short stretch of 12 amino acids situated at the N terminus and forms a heterotetramer composed of two annexin II and two p11 protein molecules (43) . Annexin V is known to give doublet bands exhibiting an apparent difference of 4 kDa on SDS-PAGE. Unlike annexin IV, the annexin V isoforms are not sensitive to reducing agents and occur as a result of only two amino acid substitutions between the isoforms(44) . This may be the first report of the formation of a covalently linked homodimer among annexins. Cysteine 198 is relatively conserved in annexins, and three of four cysteines (198, 242, and 315) in annexin IV are conserved in annexin III. Chen et al.(45) reported three-dimensional models of annexins (I, II, III, V and VII) constructed by homology modeling using the crystal structure of annexin V as a template, and showed that cysteines 198, 242, and 315 in the annexin III model do not appear to be exposed on the protein surface. A conformational change to expose cysteine 198 to the outside and to allow it to form an intermolecular disulfide bridge appears to occur upon dimer formation of annexin IV.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBank(TM)/EMBL Data Bank with accession number(s) D78178[GenBank].