©1996 by The American Society for Biochemistry and Molecular Biology, Inc.
Examination of the Potential Functional Role of Conserved Cysteine Residues in the Hormone Binding Domain of the Human 1,25-Dihydroxyvitamin D Receptor (*)

(Received for publication, August 9, 1995; and in revised form, December 15, 1995)

Shigeo Nakajima (§) Jui-Cheng Hsieh Peter W. Jurutka Michael A. Galligan Carol A. Haussler G. Kerr Whitfield Mark R. Haussler (¶)

From the Department of Biochemistry, College of Medicine, The University of Arizona, Tucson, Arizona 85724

ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES

ABSTRACT

The significance of conserved cysteines at positions 288, 337, and 369 in the hormone binding domain of the human vitamin D receptor was evaluated by individual site-directed mutagenesis to glycine. Neither nuclear localization nor heterodimerization with retinoid X receptors in binding to the vitamin D-responsive element was appreciably affected by altering these cysteines, but vitamin D hormone (1,25-(OH)(2)D(3)) activated transcription was compromised significantly in the C288G and C337G mutants. Only the C288G mutant displayed depressed (3-fold) 1,25-(OH)(2)D(3) ligand binding affinity at 4 °C, in vitro, although at elevated temperatures (23-37 °C), ligand binding was attenuated severely in C288G, moderately in C337G and very mildly in C369G. The degree of impairment of ligand binding at physiologic temperatures correlated with the requirement for increased concentrations of 1,25-(OH)(2)D(3) ligand to maximally stimulate transcriptional activity in co-transfected COS-7 cells. Thus cysteine 288 and, to a lesser extent, cysteine 337 are important for high affinity hormone binding to the vitamin D receptor, which ultimately leads to ligand-dependent transcriptional activation.


INTRODUCTION

The 1,25-dihydroxyvitamin D(3) receptor (VDR) (^1)is a nuclear protein that mediates many of the biological actions of the 1,25-dihydroxyvitamin D(3) (1,25-(OH)(2)D(3)) hormone, such as regulating calcium/phosphorus metabolism and cellular differentiation (1) . The VDR belongs to the steroid/retinoid/thyroid hormone receptor superfamily and, as with other members of this receptor family, consists of a highly conserved domain, which contains two zinc finger motifs required for DNA binding, and a carboxyl-terminal hormone binding domain (HBD) responsible for the specific, high affinity binding of 1,25-(OH)(2)D(3), the active form of vitamin D(2) . The binding of ligand presumably initiates a conformational change in the VDR protein whereupon the hormone-receptor complex binds to distinct sequences of nucleotides, termed vitamin D-responsive elements (VDREs), located upstream of target genes and thereby modulates transcription(3) . VDRE sequences have been identified in the promoter regions of the human (4) and rat (5) osteocalcin genes as well as in the mouse osteopontin gene(6) . Generally, VDREs consist of an imperfect direct repeat of six nucleotide bases, GGGTGA, separated by a three-base pair spacer. Gel mobility shift analysis using these VDREs has revealed that an additional nuclear factor, the family of retinoid X receptors (RXRs), forms heterodimers with the VDR (7, 8, 9) and facilitates its binding to DNA. VDR-RXR heterodimerization on VDREs is postulated to play an essential role in transcriptional modulation of target genes through the VDR. Mutational analysis has revealed that a conserved region between residues 244 and 263(10, 11) , as well as the fourth and ninth heptad repeats (12) in the HBD of human VDR (hVDR), are essential for heterodimerization on the VDRE. We have also reported that the region between amino acids 403 and 427 in the HBD of hVDR may be involved in transcriptional regulation(12) . Therefore, the HBD of hVDR must be considered as a multifunctional domain important not only for binding to the 1,25-(OH)(2)D(3) ligand, but also for forming a heterodimer with RXR and likely for interacting with the transcriptional machinery. These functions are closely related, since the 1,25-(OH)(2)D(3) hormone enhances the formation of VDR heterodimers with RXR on the VDRE (9, 13) and co-expression of RXRs enhances ligand-dependent transactivation mediated by the VDR(9) .

Cysteine residues are known to play a vital role in the formation and maintenance of protein conformation. Eight cysteine residues in the DNA binding domain are absolutely conserved among the steroid/retinoid/thyroid hormone receptors and form two zinc fingers which are involved in binding to the cognate-responsive elements of these receptors(14) . Furthermore, in keeping with an important structural role for cysteines, several cysteinyl residues in the HBD of steroid hormone receptors have been proposed to be involved in ligand binding. Previous studies revealed that cysteine residues in the glucocorticoid receptor (GR)(15, 16, 17, 18, 19, 20) and estrogen receptor (ER) (21, 22, 23, 24) play important roles in high affinity ligand binding. In the HBD of VDR, cysteines at positions 288, 337, and 369 are conserved in the human(25) , rat(26) , and avian (27, 28) receptors. Little information is available on the importance of HBD cysteines in the mechanism of VDR action, although in an early biochemical experiment, Coty et al. (29) showed that treatment of hormone-occupied avian VDR with mercurial reagents causes a dissociation of the 1,25-(OH)(2)D(3) ligand. This result suggested that VDR amino acids with sulfhydryl-containing side chains may play a crucial role in ligand binding, perhaps by maintaining the proper conformation of the hormone binding pocket. Detailed involvement of specific cysteines in this and other functions of VDR remains to be elucidated. In the present study, we constructed several site-specific mutant hVDRs to examine the precise roles of each of these conserved cysteine residues in the HBD of hVDR.


MATERIALS AND METHODS

Preparation of Wild-type and Mutant VDRs

The hVDR expression vector, pSG5hVDR(30) , was utilized to create point-mutant hVDR plasmids by in vitro site-directed mutagenesis(31) . Three cysteine residues in the HBD of hVDR at positions 288, 337, and 369, which are conserved among species, were replaced by glycines (designated C288G, C337G, and C369G, respectively). COS-7 monkey kidney cells (5 times 10^6 cells/150-mm culture dish) were transfected with 50 µg of each plasmid/plate by the calcium-phosphate DNA co-precipitation method, as described previously(32) , and cultured in Dulbecco's modified Eagle's medium (DMEM) (Life Technologies, Inc.) with 10% dextran-coated charcoal-stripped fetal bovine serum (Gemini Bioproducts, Calabasas, CA) for 48 h. The cells were then scraped, washed three times with phosphate-buffered saline (136 mM NaCl, 26 mM KCl, 8 mM Na(2)HPO(4), 1.5 mM KH(2)PO(4), pH 7.2), and resuspended in KETD-0.3 buffer (10 mM Tris-HCl, pH 7.6, 1 mM EDTA, 300 mM KCl, 10% glycerol, 1 mM dithiothreitol, 0.1 mM phenylmethylsulfonyl fluoride, 15 µg/ml aprotinin, 1 µg/ml leupeptin, 1 µg/ml pepstatin A). After sonication, samples were centrifuged at 215,000 times g for 30 min at 2 °C. The supernatant was collected, divided into small aliquots, and stored at -70 °C. Western blotting of VDR was performed with anti-VDR monoclonal antibody, 9A7, as described previously(33) . Protein concentrations were determined according to the method of Bradford (34) .

Ligand Binding Assays

COS-7 cell extracts containing wild-type or mutant VDR proteins were incubated with the indicated concentrations of 1,25-(OH)(2)[^3H]D(3) (Amersham Corp.) for 10 h at 4 °C or for 2 h at 23 °C along with 20 µg of rat liver nuclear extract in the presence or absence of a 400-600-fold molar excess of unlabeled 1,25-(OH)(2)D(3). Addition of rat liver nuclear extract, which alone does not possess 1,25-(OH)(2)D(3) binding activity, to samples containing overexpressed VDR is required for efficient high affinity, saturable 1,25-(OH)(2)D(3) hormone binding(35) . Bound and free ligand were separated with dextran-coated charcoal for analysis of hormone binding(36) .

Cellular Distribution of VDR

COS-7 cells transfected with wild-type or mutant VDR plasmids were incubated in the absence or presence of 10M 1,25-(OH)(2)D(3) for 12 h at 37 °C. The nuclear versus cytosolic partitioning of VDR was determined as described previously(33) .

Nuclear Uptake Assay

Assessment of the nuclear uptake of 1,25-(OH)(2)[^3H]D(3) by COS-7 cells was performed essentially as described previously (37) with slight modifications. COS-7 cells overexpressing hVDRs were harvested with 0.025% trypsin, 0.02% EDTA and washed twice with 5 ml of DMEM. Cells were then resuspended in DMEM containing 1% fetal bovine serum at a concentration of 2.5 times 10^6 cells/ml and incubated with the indicated concentrations of 1,25-(OH)(2)[^3H]D(3) in the presence or absence of a 600-fold molar excess of unlabeled 1,25-(OH)(2)D(3) at 37 °C for 2 h with shaking (100 rpm). Nuclear fractions were obtained as described elsewhere(33) , and the radioactivity was measured by liquid scintillation counting. Specific binding was calculated by subtracting nonspecific binding from total binding.

Gel Mobility Shift Assay

Gel mobility shift assays were performed in the absence of 1,25-(OH)(2)D(3) ligand as described previously(38) . Briefly, cellular extracts from COS-7 cells overexpressing wild-type or mutant hVDR were incubated with 0.5 ng of P-labeled rat osteocalcin VDRE (5`-AGCTGCACTGGGTGAATGAGGACATTACA-3`) in the presence of RXRalpha or RXRbeta for 30 min at 22 °C. The reaction mixtures were loaded onto 4% nondenaturing polyacrylamide gels in 0.25 times TBE (11 mM Tris, 11 mM borate, 0.5 mM EDTA). Gels were run at 10 mA for 70 min, dried, and subjected to autoradiography.

Transcriptional Activation Assay

Four copies of the CT4 oligonucleotide, which contains the rat osteocalcin VDRE, were subcloned into the upstream region of the viral thymidine kinase promoter-growth hormone reporter gene construct (Nichols Institute, San Juan Capistrano, CA) creating (CT4)(4)-TKGH(5) . COS-7 cells (5 times 10^5 cells/60-mm culture plate) were co-transfected with 5 µg of (CT4)(4)-TKGH and wild-type or mutant hVDR plasmids and then incubated with a final concentration of 10 to 10M 1,25-(OH)(2)D(3) or ethanol vehicle for 12 h at 37 °C. Growth hormone concentrations in the culture medium were determined by radioimmunoassay (Nichols Institute).


RESULTS

Expression of Wild-type and Mutant hVDRs

Cysteine residues in the HBD of hVDR at positions 288, 337, and 369, which are conserved in VDRs from various species, were individually replaced with glycine by site-directed mutagenesis (designated C288G, C337G, and C369G, respectively). The resulting mutated hVDR proteins are depicted schematically in Fig. 1A. Wild-type and mutant hVDR expression plasmids were transfected into COS-7 cells, and immunoblotting was employed to assess the levels and stability of these proteins (Fig. 1B). The mutations introduced do not appear to dramatically affect the expression or stability of the hVDR protein in COS-7 cells.


Figure 1: Schematic representation and expression of mutant hVDRs. A, mutant hVDR cDNAs were generated by site-directed mutagenesis within the expression vector pSG5hVDR to replace Cys-288, -337, and -369 with glycine. The resulting mutant hVDR proteins are depicted schematically in the context of the hormone binding domain. B, wild-type and mutant hVDRs were expressed in COS-7 cells, and cell extracts were prepared as described under ``Materials and Methods.'' These lysates were subjected to immunoblotting with a specific monoclonal antibody to VDR (9A7). Molecular weight standards are shown in the first and last lanes.



Heterodimerization on the VDRE

Because the replaced cysteines are near heptad repeat regions of hVDR (Fig. 1A) known to be required for dimerization with RXR, we first performed gel mobility shift assays with cellular extracts from transfected COS-7 cells overexpressing wild-type or mutant hVDRs in order to compare the abilities of the receptors to form heterodimers with RXR on the VDRE. The amount of COS-7 cellular extract utilized in these VDRE binding assays was adjusted based on the level of hVDR expression as determined by quantitative immunoblotting. Wild-type and all mutant hVDRs tested formed hVDR-dependent, shifted complexes with both RXRalpha (Fig. 2, lanes 1-4), and RXRbeta (Fig. 2, lanes 6-9). C288G appeared to heterodimerize with the RXRs on the VDRE with a capacity identical to that of the wild-type receptor (compare lanes 1 and 2 or 6 and 7 of Fig. 2). However, both C337G and C369G were slightly diminished in their ability to form shifted complexes in relation to the native hVDR (see lanes 3 and 4 or 8 and 9, Fig. 2). This analysis utilizing enriched preparations of RXRalpha and RXRbeta revealed that all mutant hVDRs examined formed qualitatively normal heterocomplexes with the RXRs, with only minor quantitative attenuation of C337G and C369G, the latter effect best detected by careful examination of the relative amounts of unshifted probe in Fig. 2. Extracts of COS-7 cells transfected with a control vector lacking the hVDR cDNA, even in the presence of RXRs (Fig. 2, lanes 5 and 10), did not form a complex on the VDRE. This observation, plus the fact that shifted complexes could be inhibited by VDR-specific monoclonal antibody 9A7 (data not shown), argues that the retarded bands are indeed comprised of complexes of hVDR. Finally, identical conclusions regarding the mutant hVDRs expressed in COS-7 cells were reached when heterodimerization was assessed in combination with endogenous nuclear factors and RXRs present in a rat liver nuclear extract (data not shown).


Figure 2: Heterodimerization of the wild-type or mutant hVDRs with retinoid X receptors on the VDRE. Cellular extracts from COS-7 cells expressing wild-type or mutant hVDRs were incubated with P-labeled rat osteocalcin VDRE in the presence of RXRs. Detailed procedures are described under ``Materials and Methods.'' Extracts from COS-7 cells transfected with expression plasmids for wild-type hVDR (lanes 1 and 6), C288G (lanes 2 and 7), C337G (lanes 3 and 8), C369G (lanes 4 and 9), or expression vector pSG5 without the hVDR cDNA insert (lanes 5 and 10) were incubated with P-labeled VDRE in combination with human RXRalpha (lanes 1-5) or mouse RXRbeta (lanes 6-10). RXRalpha and RXRbeta were expressed and partially purified as described elsewhere(9) .



Nuclear Translocation of Expressed Receptors

Steroid/retinoid/thyroid hormone receptors are localized to, or translocated into, the cell nucleus upon ligand binding. In the case of VDR, like the retinoid and thyroid hormone receptors, the unoccupied receptor is already predominantly localized in the nucleus(39, 40) . Although the ``hinge'' region between the DNA binding and HBD of many nuclear receptors has been proposed to be responsible for nuclear translocation(14) , it is possible that conformational changes resulting from the introduction of point mutations in the hormone binding domain may attenuate nuclear translocation and therefore diminish DNA binding and transcriptional activity of mutant hVDRs. Fig. 3illustrates VDR immunoblotting utilizing equivalent amounts of total protein of nuclear (N) and cytosolic (C) fractions of COS-7 cells transfected with the indicated receptor and incubated in the absence or presence of 1,25-(OH)(2)D(3). As expected, VDR is enriched in the nuclear fraction and the subcellular partitioning is not markedly affected by treatment with the hormonal ligand. Most relevant, all of the mutant hVDRs exhibit a similar apparent N/C ratio when compared with the wild-type receptor as determined by quantitative densitometric scanning of these immunoblots (data not shown). In this experiment, we noted that C337G was either expressed in lower amounts or was more unstable (especially in the absence of ligand) during the fractionation procedure than wild-type receptor and the other two hVDR mutants, but nuclear localization was still evident. These results strongly suggest that mutations at cysteine 288, 337, or 369 do not significantly alter the ability of the receptor to translocate into the nucleus.


Figure 3: Cellular distribution and stability of expressed wild-type and mutant hVDRs in COS-7 cells. COS-7 cells transfected with wild-type or mutant hVDR expression plasmids were incubated in the absence (upper panel) or presence (lower panel) of 10M 1,25-(OH)(2)D(3) for 12 h at 37 °C. Nuclear (N) and cytosolic (C) fractions were prepared as described elsewhere(33) . Western blotting to detect the specific activity of VDR in each fraction was performed with 15 µg of total protein from each preparation.



1,25-(OH)(2)D(3)Ligand Binding at 4 °C, in Vitro

Considering that mercurial reagents had been found to dissociate 1,25-(OH)(2)D(3) from VDR(29) , we next examined the ligand binding activity of the cysteine-mutant hVDRs utilizing an assay performed in vitro. Extracts from transfected COS-7 cells were incubated at 4 °C for 10 h with 1,25-(OH)(2)[^3H]D(3) at concentrations of 0.23, 0.45, 0.90, 1.35, and 1.8 nM. Scatchard analyses of saturable, specific hormone binding by wild-type and mutant hVDRs yielded evidence for a single class of high affinity binding sites in each case (data not shown). A summary of the average results (±S.E.) from four separate experiments is as follows. The dissociation constant of C288G (293 ± 40 pM) was 3.4 times higher than the wild-type K(d) of 86 ± 15 pM (p < 0.005). In contrast, C337G (K(d) = 35 ± 7 pM) demonstrated approximately one-half of the dissociation constant of the wild-type (p < 0.02), while C369G (K(d) = 77 ± 2 pM) was essentially equivalent to the wild-type receptor with respect to this parameter. Thus, only mutation of cysteine 288 appears to significantly diminish the affinity of hVDR for the 1,25-(OH)(2)D(3) ligand, at least as assessed by assay of binding at 4 °C, in vitro.

Ligand-dependent Transcriptional Activation by 10 nM 1,25-(OH)(2)D(3)

Even though alteration of the three cysteines in question did not dramatically affect ligand or DNA binding, in vitro, we proceeded to investigate 1,25-(OH)(2)D(3)-mediated transcriptional activation by wild-type or mutant hVDRs via co-transfection of individual hVDR plasmids and a rat osteocalcin VDRE-containing growth hormone reporter gene construct in COS-7 cells. Fig. 4A shows the effects of a slightly supraphysiologic concentration of 10M 1,25-(OH)D on VDRE-mediated transactivation. The hormone generated a 33-fold increase in the transcription of the reporter in the presence of wild-type hVDR. C337G demonstrated transcriptional activation by 1,25-(OH)D at levels approximately 60% of the wild-type hVDR, while the activity of C369G was not significantly different from the wild-type receptor. Surprisingly, C288G did not show detectable transcriptional activation (Fig. 4A) by the 1,25-(OH)D ligand, even though this mutant exhibited reduced but still relatively high binding affinity for the ligand under the conditions of the in vitro binding assay at 4 °C.


Figure 4: Transcriptional activation by 1,25-(OH)(2)D(3) via wild-type and cysteine point mutant hVDRs. COS-7 cells were co-transfected with wild-type or mutant pSG5hVDR expression plasmids along with the (CT4)(4)-TKGH reporter construct. The cells were then incubated with 1,25-(OH)(2)D(3) or ethanol vehicle for 12 h, and growth hormone secretion into the medium was assessed. A, transcriptional activation in the presence of 10M 1,25-(OH)(2)D(3). The amounts of growth hormone secreted into the media were compared with the amount in cultures receiving wild-type hVDR + 1,25-(OH)(2)D(3), which was set at 100 arbitrary units. Means (±S.E.) from four separate experiments are depicted. Expression of mutant hVDR proteins in the cells used in this experiment was similar to that of wild-type hVDR as determined by immunoblotting (data not shown). B, dose-response curves. COS-7 cells were transfected with wild-type hVDR (), C369G (box), C337G (bullet), or C288G (circle) expression plasmids along with (CT4)(4)-TKGH reporter and then treated with various concentrations of 1,25-(OH)(2)D(3) as indicated. Each point represents the average of assays on duplicate plates of cells, and the data were normalized to the maximal transcriptional activation effect of 1,25-(OH)(2)D(3) with the wild-type receptor. Virtually identical dose-response curves were obtained in two repeats of the experiment shown (see ``Results'' for compilation of EC values). The typical maximal stimulation of transcription by 1,25-(OH)(2)D(3) with the C337G and C288G mutant receptors was 15-fold, comparable with wild-type and C369G in these experiments, but less than the 33-fold effect reported for the experiment in A.



To amplify this analysis of transactivation, we performed a series of dose-response experiments in co-transfected COS-7 cells treated with 1,25-(OH)(2)D(3) concentrations ranging from 10 to 10M. A representative result is pictured in Fig. 4B, showing that the C369G hVDR mediates transcriptional activation nearly as effectively as wild-type receptor, with only a slight defect apparent at the lower doses of 10 and 10M 1,25-(OH)(2)D(3). In the case of C337G, the ligand response curve is appreciably shifted to the right, with normalization of transactivation only occurring at the relatively high level of 10M 1,25-(OH)(2)D(3) and no significant effect at 10M 1,25-(OH)(2)D(3) (Fig. 4B). C288G is clearly the most severely affected mutant, with a minuscule but statistically significant response at 10M 1,25-(OH)(2)D(3) and the requirement for a concentration of 10M 1,25-(OH)(2)D(3) to restore maximal transactivation. From the experiment depicted in Fig. 4B and two independent repeats, the following EC values (in nM 1,25-(OH)(2)D(3) ± S.D., n = 3) were calculated: wild-type VDR = 1.0 ± 0.2; C369G = 1.7 ± 0.3; C337G = 4.3 ± 1.5; and C288G = 187 ± 23. These data provide indirect evidence for a mild hormone binding suppression in C369G and more substantial reductions in ligand binding affinities at 37 °C for C337G and especially C288G. The observation that transactivation can be effectively rescued in all mutant hVDRs by increasing ligand concentrations argues against any of the three cysteines in question participating in subsequent interaction with the transcription machinery.

1,25-(OH)(2)D(3)Binding at Elevated Temperatures

Although ligand binding studies with cytosolic extracts at 0-4 °C are traditional for steroid hormone receptors, the dissociation constants for the three cysteine mutant hVDRs obtained in this fashion (see above) are inconsistent with apparent ligand binding affinities inferred from the transcriptional dose-response patterns shown in Fig. 4B. For example, C288G exhibits only a 3.4-fold increase over wild-type in apparent K(d) as assessed at 4 °C, while the EC for 1,25-(OH)(2)D(3) action via this mutant is 187 times that of the wild-type receptor. To resolve this discrepancy, we more directly examined the ligand binding activities of wild-type and mutant hVDRs at 37 °C, in vivo, by measuring the nuclear uptake of tritiated 1,25-(OH)(2)D(3) in intact COS-7 cells overexpressing the various hVDRs. Fig. 5A illustrates the specific binding of ligand in nuclear fractions of transfected COS-7 cells at five different concentrations of 1,25-(OH)[H]D. In studies such as the one pictured in Fig. 5A, we have found that saturation of wild-type hVDR even at low, endogenous receptor levels occurs only at relatively high concentrations of 1,25-(OH)D ligand, i.e. geq5 nM(37) . All three mutant hVDRs showed reduced nuclear uptake of the ligand in the intact COS-7 cells. Significantly, C288G demonstrated the lowest uptake, which was approximately 5% of wild-type levels; this finding correlates with the requirement for very high concentration of hormonal ligand (10M) to stimulate receptor-mediated transcription for this mutant (Fig. 4B). C337G, which paradoxically exhibited higher ligand binding activity, in vitro, at 4 °C as compared with the wild-type receptor, but a shift to the right in the transcriptional activity dose-response curve with 1,25-(OH)D at 37 °C (Fig. 4B), displayed markedly reduced nuclear uptake of 1,25-(OH)D. Because nuclear partitioning of all mutant hVDR proteins appears normal (Fig. 3), these data suggest that 1,25-(OH)D ligand binding activity, in vivo, at 37 °C is attenuated by the mutation at cysteine 337 and to a greater degree by altering cysteine 288. The results illustrated in Fig. 5A also reveal a small but significant suppression of nuclear uptake of ligand at 37 °C for the C369G receptor. Again, this slight defect appears to be in concert with the 70% increase in EC for 1,25-(OH)D-stimulated transcription with this mutant as noted in Fig. 4B and described in the accompanying text. Therefore, the level of nuclear uptake of the 1,25-(OH)D ligand by COS-7 cells transfected with the various mutant hVDRs (Fig. 5A) correlates with the EC values for 1,25-(OH)D-enhanced transcriptional activity of these mutant receptors (Fig. 4B), thereby demonstrating that reduced hormone binding is the major source of attenuation in transcriptional activation exhibited by the C288G and C337G mutants.


Figure 5: Specific binding of 1,25-(OH)(2)[^3H]D(3) in intact cells at 37 °C and in cellular extracts at 23 °C, in vitro. A, nuclear uptake of 1,25-(OH)(2)[^3H]D(3) by COS-7 cells expressing wild-type or mutant hVDRs. COS-7 cells expressing hVDRs were harvested, resuspended in culture medium containing 1% fetal bovine serum, and incubated with five concentrations of 1,25-(OH)(2)[^3H]D(3) in the presence or absence of a 600-fold molar excess of unlabeled 1,25-(OH)(2)D(3) at 37 °C for 2 h. B, specific binding of 1,25-(OH)(2)[^3H]D(3) to extracts of COS-7 cells transfected with hVDR and cysteine point mutants. Incubations were carried out for 2 h at 23 °C in the presence of 4.3 nM labeled ligand ± a 400-fold molar excess of radioinert 1,25-(OH)(2)D(3) to obtain specific binding. The binding shown is corrected for level of expression/degradation as determined by Western blotting.



Because of the striking differences between ligand binding kinetics with receptor extracts at 4 °C and in intact cells at 37 °C (Fig. 5A), we performed a final 1,25-(OH)(2)D(3) binding experiment with cellular extracts at the intermediate temperature of 23 °C. Incubation of extracted VDR at this elevated temperature was found to elicit degradation (data not shown), so we were limited to the relatively short incubation time of 2 h to preserve the receptor. Under these conditions, saturation kinetics were not achieved, precluding the determination of K(d) values. However, specific binding levels at 23 °C for each mutant at a 1,25-(OH)(2)D(3) ligand concentration of 4.3 nM (Fig. 5B), corrected for receptor expression by normalizing the results to the signals from a Western blot performed after a 23 °C incubation (data not shown), strongly support the conclusion that C369G binds 1,25-(OH)(2)D(3) reasonably well at elevated temperatures while C337G and especially C288G hVDRs are defective in ligand binding.


DISCUSSION

Evidence for the involvement of cysteine residues in steroid hormone receptor-ligand binding was originally reported when it was observed that mercurial reagents which interfere with protein thiol residue interaction reduce ligand binding to the ER (21) and GR(15, 41) . Coty et al. (29) also found that treatment of occupied avian VDR with mercurial reagents causes a dissociation of 1,25-(OH)(2)D(3). With active analogs utilized for affinity labeling of the receptor, such as dexamethasone 21-mesylate, Cys-656 of the rat GR (corresponding to Cys-644 of the mouse GR) was identified as a critical residue for ligand binding(16, 17, 18) . Utilizing arsenite as a thiol bridging reagent, it has been demonstrated that Cys-656 and -661 of rat GR are important for hormone binding(20) . In the case of ER, Harlow et al. (22) reported that both an estrogen agonist and an estrogen antagonist covalently bind to Cys-530 in the HBD of human ER.

The present data advance our understanding of the ligand binding domain of hVDR and provide insight into the potential role of the three conserved cysteine residues in this region. Cysteine 288 is clearly essential for normal high affinity hormone binding (Fig. 5, A and B) and stimulation of transcription at physiologic doses of 1,25-(OH)(2)D(3) ligand (Fig. 4, A and B), but is not required for heterodimeric association of hVDR with RXR on the VDRE (Fig. 2). Because significant transcriptional activation can be generated when cells expressing C288G hVDR are treated with the high dose of 10M 1,25-(OH)(2)D(3) (Fig. 4B), cysteine 288 does not seem to be as crucial for transactivation, per se, as are residues 403-427(12) . In contrast, cysteine 369 is not critical for high affinity hormone binding at 4 °C, and mutation of this residue results in only minor suppressions of 1,25-(OH)(2)D(3) nuclear uptake (Fig. 5A), ligand binding at 23 °C (Fig. 5B), and possibly of heterodimerization with RXRs (Fig. 2); these effects are manifest as a small but significant shift in the dose-response curve with respect to transactivation (Fig. 4B). Finally, alteration of cysteine 337 to glycine elicits a paradoxical enhancement of ligand binding at 4 °C and a minor attenuation of RXR heterodimerization capacity (Fig. 2), but results in a significant diminution in hVDR transactivation function (Fig. 4, A and B), the latter finding most likely being explained by relatively ineffective 1,25-(OH)(2)D(3) ligand binding at 23-37 °C (Fig. 5, A and B). Strong evidence supporting this conclusion is provided by the fact that transactivation by C337G is restored to normal in the presence of 10M 1,25-(OH)(2)D(3) (Fig. 4B). Mutations such as C337G, therefore, appear to result in a temperature-dependent phenotype for as yet unexplained reasons and reveal a necessity for functional testing at or near physiological temperatures. This concept is further illustrated in the case of C288G. When cell extracts were assayed by traditional ligand binding, at 4 °C, in vitro, the Cys-288 mutant exhibited approximately one-third of the binding affinity of the wild-type receptor. Yet this mutant VDR displayed only 5% of wild-type nuclear uptake of the hormonal ligand in vivo, at 37 °C (Fig. 5A). Although there are several possibilities to explain these results, including: i) instability and degradation of the receptor protein at physiologic temperatures, ii) attenuated nuclear translocation of the receptor, and iii) weaker binding to the ligand in vivo; the first two possibilities are not likely because nuclear fractions from COS-7 cells expressing the C288G mutant receptor contained a similar amount of intact hVDR protein compared with the cells expressing wild-type hVDR (Fig. 3). Thus, we again conclude that there is a temperature-sensitive defect, in this case in the hormone binding activity of the C288G mutant.

The recent crystal structure elucidation of the HBD of human RXRalpha (42) appears to provide a prototype for this region in nuclear receptors. The RXRalpha ligand binding domain consists of an antiparallel alpha-helical sandwich containing 11 alpha-helices surrounding two beta-strands(42) , and the proposed ligand binding pocket is a hydrophobic cavity bordered by helix 5, both beta-strands, helix 7, the COOH-terminal portion of helix 10 and the NH(2)-terminal part of helix 11. That a similar ligand binding pocket may exist in the other members of the nuclear receptor superfamily is suggested not only by the homologies seen in this region (typically 20-30% across the superfamily), but also by mutagenesis studies with ER and GR. Katzenellenbogen et al. (43) have previously suggested that Cys-381 and Cys-530 lie at the ``mouth'' of a putative ligand binding pocket; these two residues in fact correspond to positions in human RXRalpha within helix 5 and the NH(2)-terminal portion of helix 11, respectively. The participation of the two beta-strands and helix 7 in a generalized hormone binding site is confirmed by the findings of Chakraborti et al.(20) , who implicate Cys-640 (1st beta-strand), as well as Cys-656 and Cys-661 (both in helix 7), as being important for ligand binding by rat GR. In addition, a previous report describing the effect of an artifactual mutation in the cloned human ER from MCF-7 cells (44) indicates that Gly-400 raises the dose of estradiol-17beta required for maximal transactivation by 10-100-fold; this residue is also located in the region of ER that corresponds to the second beta-strand in RXRalpha. More recent site-directed mutagenesis of the mouse GR (45) points to the significance of Cys-742 (COOH-terminal portion of helix 10) in ligand-dependent transcriptional activation. The location of all of these residues implicated in hormone-binding or hormone-dependent functions of the respective receptors seems in complete agreement with the proposed prototypical hydrophobic binding pocket.

The two mutants reported here for hVDR which have substantial effects on hormone binding and hormone-dependent transactivation, namely Cys-288 and Cys-337, occur in areas corresponding to the 1st beta-strand in RXRalpha and in helix 8, respectively. Cys-288 would therefore take its place along with Cys-640 in rat GR and Gly-400 in human ER as confirming the general importance of the beta-strand region in ligand binding. Furthermore, recently reported natural mutations of hVDR which display impaired hormone binding lie in helix 5 (Arg-274 (46) ) and helix 7 (Ile-314(47) ), both critical regions in RXR ligand association. In contrast, Cys-337 resides in an area of hVDR corresponding to helix 8, which places it outside the proposed ligand binding pocket. However, mutations at analogous positions in the human ER at Cys-447 (48) and in the mouse GR at Cys-671 (45) result in impaired ligand-induced transcriptional activation at physiological temperatures. Because these mutations have marked effects on hormone binding and transactivation, it is suggested that helix 8, which lies adjacent and parallel to helix 5 in the structure of RXRalpha, might somehow be important in stabilizing the conformation of the ligand binding cavity. Thus, the fact that RXR, ER, GR, and VDR represent widely diverse members of the nuclear receptor superfamily argues strongly that many features of the proposed ligand binding pocket may be shared across the nuclear receptor superfamily.

Covalent modification of specific residues in hVDR with ligands using affinity labeling techniques will be required to extend the present conclusions. Further studies of the type carried out in this report could involve altering Cys-288 and Cys-337 in hVDR to serine or alanine residues, since they may better preserve the size of the R-group and possibly the protein conformation. Ultimately, a physical examination of the molecular structure of the 1,25-(OH)(2)D(3)-occupied, hormone binding domain of VDR, such as through x-ray crystallography, will be necessary to elucidate the mechanism of 1,25-(OH)(2)D(3) ligand binding and how this can influence the control of gene transcription.


FOOTNOTES

*
This work was supported by National Institutes of Health Grants DK-33351 and AR-15781 (to M. R. H.), DK-49604 (to J.-C. H.), and DK-40372 (to G. K. W.). A preliminary report of some of the data reported in this manuscript was presented at the Fifteenth Annual Meeting of the American Society for Bone and Mineral Research and published in abstract form ((1993) J. Bone Mineral Res.8, Suppl. 1, S126). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore by hereby marked ``advertisement'' in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

§
Present address: Dept. of Environmental Medicine, Research Institute, Osaka Medical Center for Maternal and Child Health, Osaka 590-02, Japan.

To whom correspondence and reprint requests should be addressed: Dept. of Biochemistry, College of Medicine, The University of Arizona, Tucson, AZ 85724. Tel.: 520-626-6033; Fax: 520-626-9015.

(^1)
The abbreviations used are: VDR, 1,25-dihydroxyvitamin D(3) receptor; hVDR, human VDR; 1,25-(OH)(2)D(3), 1,25-dihydroxyvitamin D(3); HBD, hormone binding domain; VDRE, vitamin D responsive element; RXR, retinoid X receptor; GR, glucocorticoid receptor; ER, estrogen receptor; DMEM, Dulbecco's modified Eagle's medium.


ACKNOWLEDGEMENTS

We thank Drs. Ronald M. Evans and David J. Mangelsdorf for the generous gift of the human RXRalpha and mouse RXRbeta cDNAs. We also gratefully acknowledge Mina C. Reeder, Michelle Thatcher, and Sanford H. Selznick for their technical assistance.


REFERENCES

  1. Haussler, M. R., Mangelsdorf, D. J., Komm, B. S., Terpening, C. M., Yamaoka, K., Allegretto, E. A., Baker, A. R., Shine, J., McDonnell, D. P., Hughes, M., Weigel, N. L., O'Malley, B. W., and Pike, J. W. (1988) Recent Prog. Horm. Res. 44, 263-305 [Medline] [Order article via Infotrieve]
  2. Haussler, M. R., Mangelsdorf, D. J., Yamaoka, K., Allegretto, E. A., Komm, B. S., Terpening, C. M., McDonnell, D. P., Pike, J. W., and O'Malley, B. W. (1988) in Steroid Hormone Action (Ringold, G., ed) Vol. 75, pp. 247-262, Alan R. Liss, Inc., New York
  3. Haussler, M., Terpening, C., Haussler, C., MacDonald, P., Hsieh, J.-C., Jones, B., Jurutka, P., Meyer, J., Komm, B., Galligan, M., Selznick, S., and Whitfield, G. K. (1991) in Vitamin D: Gene Regulation, Structure-Function Analysis and Clinical Application (Norman, A. W., Bouillon, R., and Thomasset, M., eds) pp. 3-11, Walter de Gruyter, Berlin
  4. Ozono, K., Liao, J., Kerner, S. A., Scott, R. A., and Pike, J. W. (1990) J. Biol. Chem. 265, 21881-21888 [Abstract/Free Full Text]
  5. Terpening, C. M., Haussler, C. A., Jurutka, P. W., Galligan, M. A., Komm, B. S., and Haussler, M. R. (1991) Mol. Endocrinol. 5, 373-385 [Abstract]
  6. Noda, M., Vogel, R. L., Craig, A. M., Prahl, J., DeLuca, H. F., and Denhardt, D. T. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 9995-9999 [Abstract]
  7. Yu, V. C., Delsert, C., Andersen, B., Holloway, J. M., Devary, O. V., Näär, A. M., Kim, S. Y., Boutin, J.-M., Glass, C. K., and Rosenfeld, M. G. (1991) Cell 67, 1251-1266 [Medline] [Order article via Infotrieve]
  8. Kliewer, S. A., Umesono, K., Mangelsdorf, D. J., and Evans, R. M. (1992) Nature 355, 446-449 [CrossRef][Medline] [Order article via Infotrieve]
  9. MacDonald, P. N., Dowd, D. R., Nakajima, S., Galligan, M. A., Reeder, M. C., Haussler, C. A., Ozato, K., and Haussler, M. R. (1993) Mol. Cell. Biol. 13, 5907-5917 [Abstract]
  10. Rosen, E. D., Beninghof, E. G., and Koenig, R. J. (1993) J. Biol. Chem. 268, 11534-11541 [Abstract/Free Full Text]
  11. Whitfield, G. K., Hsieh, J.-C., Nakajima, S., MacDonald, P. N., Thompson, P. D., Jurutka, P. W., Haussler, C. A., and Haussler, M. R. (1995) Mol. Endocrinol. 9, 1166-1179 [Abstract]
  12. Nakajima, S., Hsieh, J.-C., MacDonald, P. N., Galligan, M. A., Haussler, C. A., Whitfield, G. K., and Haussler, M. R. (1994) Mol. Endocrinol. 8, 159-172 [Abstract]
  13. Sone, T., Kerner, S., and Pike, J. W. (1991) J. Biol. Chem. 266, 23296-23305 [Abstract/Free Full Text]
  14. Carson-Jurica, M. A., Schrader, W. T., and O'Malley, B. W. (1990) Endocr. Rev. 11, 201-220 [Abstract]
  15. Baxter, J. D., and Tomkins, G. M. (1971) Proc. Natl. Acad. Sci. U. S. A. 68, 932-937 [Abstract]
  16. Simons, S. S., Jr., Pumphrey, J. G., Rudikoff, S., and Eisen, H. J. (1987) J. Biol. Chem. 262, 9676-9680 [Abstract/Free Full Text]
  17. Carlstedt-Duke, J., Strömstedt, P.-E., Persson, B., Cederlund, E., Gustafsson, J.-Å., and Jörnvall, H. (1988) J. Biol. Chem. 263, 6842-6846 [Abstract/Free Full Text]
  18. Smith, L. I., Bodwell, J. E., Mendel, D. B., Ciardelli, T., North, W. G., and Munck, A. (1988) Biochemistry 27, 3747-3753 [Medline] [Order article via Infotrieve]
  19. Chakraborti, P. K., Garabedian, M. J., Yamamoto, K. R., and Simons, S. S. (1991) J. Biol. Chem. 266, 22075-22078 [Abstract/Free Full Text]
  20. Chakraborti, P. K., Garabedian, M. J., Yamamoto, K. R., and Simons, S. S. (1992) J. Biol. Chem. 267, 11366-11373 [Abstract/Free Full Text]
  21. Jensen, E. V., Hurst, D. J., DeSombre, E. R., and Jungblut, P. W. (1967) Science 158, 385-387 [Medline] [Order article via Infotrieve]
  22. Harlow, K. W., Smith, D. N., Katzenellenbogen, J. A., Greene, G. L., and Katzenellenbogen, B. S. (1989) J. Biol. Chem. 264, 17476-17485 [Abstract/Free Full Text]
  23. Reese, J. C., and Katzenellenbogen, B. S. (1991) J. Biol. Chem. 266, 10880-10887 [Abstract/Free Full Text]
  24. Reese, J. C., Wooge, C. H., and Katzenellenbogen, B. S. (1992) Mol. Endocrinol. 6, 2160-2166 [Abstract]
  25. Baker, A. R., McDonnell, D. P., Hughes, M., Crisp, T. M., Mangelsdorf, D. J., Haussler, M. R., Pike, J. W., Shine, J., and O'Malley, B. W. (1988) Proc. Natl. Acad. Sci. U. S. A. 85, 3294-3298 [Abstract]
  26. Burmester, J. K., Wiese, R. J., Maeda, N., and DeLuca, H. F. (1988) Proc. Natl. Acad. Sci. U. S. A. 85, 9499-9502 [Abstract]
  27. Elaroussi, M. A., Prahl, J. M., and DeLuca, H. F. (1994) Proc. Natl. Acad. Sci. U. S. A. 91, 11596-11600 [Abstract/Free Full Text]
  28. MacDonald, P. N., Dowd, D. R., and Haussler, M. R. (1994) Semin. Nephrol. 14, 101-118 [Medline] [Order article via Infotrieve]
  29. Coty, W. A., McConkey, C. L., Jr., and Brown, T. A. (1981) J. Biol. Chem. 256, 5545-5549 [Abstract/Free Full Text]
  30. Hsieh, J.-C., Jurutka, P. W., Galligan, M. A., Terpening, C. M., Haussler, C. A., Samuels, D. S., Shimizu, Y., Shimizu, N., and Haussler, M. R. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 9315-9319 [Abstract]
  31. Kunkel, T. A., Roberts, J. D., and Zakour, R. A. (1987) Methods Enzymol. 154, 367-382 [Medline] [Order article via Infotrieve]
  32. Jurutka, P. W., Hsieh, J.-C., MacDonald, P. N., Terpening, C. M., Haussler, C. A., Haussler, M. R., and Whitfield, G. K. (1993) J. Biol. Chem. 268, 6791-6799 [Abstract/Free Full Text]
  33. Hsieh, J.-C., Jurutka, P. W., Nakajima, S., Galligan, M. A., Haussler, C. A., Shimizu, Y., Shimizu, N., Whitfield, G. K., and Haussler, M. R. (1993) J. Biol. Chem. 268, 15118-15126 [Abstract/Free Full Text]
  34. Bradford, M. M. (1976) Anal. Biochem. 72, 248-254 [CrossRef][Medline] [Order article via Infotrieve]
  35. Nakajima, S., Hsieh, J.-C., MacDonald, P. N., Haussler, C. A., Galligan, M. A., Jurutka, P. W., and Haussler, M. R. (1993) Biochem. Biophys. Res. Commun. 197, 478-485 [CrossRef][Medline] [Order article via Infotrieve]
  36. Dokoh, S., Pike, J. W., Chandler, J. S., Mancini, J. M., and Haussler, M. R. (1981) Anal. Biochem. 116, 211-222 [Medline] [Order article via Infotrieve]
  37. Mangelsdorf, D. J., Koeffler, H. P., Donaldson, C. A., Pike, J. W., and Haussler, M. R. (1984) J. Cell Biol. 98, 391-398 [Abstract]
  38. MacDonald, P. N., Haussler, C. A., Terpening, C. M., Galligan, M. A., Reeder, M. C., Whitfield, G. K., and Haussler, M. R. (1991) J. Biol. Chem. 266, 18808-18813 [Abstract/Free Full Text]
  39. Clemens, T. L., Garrett, K. P., Zhou, X. Y., Pike, J. W., Haussler, M. R., and Dempster, D. W. (1988) Endocrinology 122, 1224-1230 [Abstract]
  40. Milde, P., Merke, J., Ritz, E., Haussler, M. R., and Rauterberg, E. W. (1989) J. Histochem. Cytochem. 37, 1609-1617 [Abstract]
  41. Harrison, R. W., Woodward, C., and Thompson, E. (1983) Biochim. Biophys. Acta 759, 1-6 [Medline] [Order article via Infotrieve]
  42. Bourguet, W., Ruff, M., Chambon, P., Gronemeyer, H., and Moras, D. (1995) Nature 375, 377-382 [CrossRef][Medline] [Order article via Infotrieve]
  43. Katzenellenbogen, B. S., Bhardwaj, B., Fang, H., Ince, B. A., Pakdel, F., Reese, J. C., Schodin, D., and Wrenn, C. K. (1993) J. Steroid Biochem. & Mol. Biol. 47, 39-48
  44. Tora, L., Mullick, A., Metzger, D., Ponglikitmongkol, M., Park, I., and Chambon, P. (1989) EMBO J. 8, 1981-1986 [Abstract]
  45. Chen, D., and Stallcup, M. R. (1994) J. Biol. Chem. 269, 7914-7918 [Abstract/Free Full Text]
  46. Kristjansson, K., Rut, A. R., Hewison, M., O'Riordan, J. L. H., and Hughes, M. R. (1993) J. Clin. Invest. 92, 12-16 [Medline] [Order article via Infotrieve]
  47. Haussler, M. R., Jurutka, P. W., Hsieh, J.-C., Thompson, P. D., Selznick, S. H., Haussler, C. A., and Whitfield, G. K. (1995) Bone 17, (suppl.) 33S-38S [CrossRef][Medline] [Order article via Infotrieve]
  48. Reese, J. C., and Katzenellenbogen, B. S. (1992) J. Biol. Chem. 267, 9868-9873 [Abstract/Free Full Text]

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