©1995 by The American Society for Biochemistry and Molecular Biology, Inc.
Molecular Characterization of Monodehydroascorbate Radical Reductase from Cucumber Highly Expressed in Escherichia coli(*)

(Received for publication, May 15, 1995; and in revised form, July 6, 1995)

Satoshi Sano (§) Chikahiro Miyake Bunzo Mikami Kozi Asada (¶)

From the Research Institute for Food Science, Kyoto University, Uji, Kyoto 611, Japan

ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS AND DISCUSSION
FOOTNOTES
REFERENCES

ABSTRACT

Monodehydroascorbate radical (MDA) reductase, an FAD-enzyme, is the first enzyme to be identified whose substrate is an organic radical and catalyzes the reduction of MDA to ascorbate by NAD(P)H. Its cDNA has been cloned from cucumber seedlings (Sano, S., and Asada, K.(1994) Plant Cell Physiol. 35, 425-437), and a plasmid was constructed in the present study that allowed a high level expression in Escherichia coli of the cDNA-encoding MDA reductase using the T7 RNA polymerase expression system. The recombinant MDA reductase was purified to a crystalline state, with a yield of over 20 mg/liter of culture, and it exhibited spectroscopic properties of the FAD similar to those of the enzyme purified from cucumber fruits during redox reactions with NADH and MDA. The red semiquinone of the FAD of MDA reductase was generated by photoreduction. p-Chloromercuribenzoate inhibited the reduction of the enzyme-FAD by NADH, and dicumarol suppressed electron transfer from the reduced enzyme to MDA. The specificity of electron acceptors of the recombinant enzyme appeared to be similar to that of MDA reductase, even though the amino acid sequence encoded by the cDNA was somewhat different from that of the enzyme purified from cucumber fruits. The K values for NADH and NADPH of the recombinant enzyme indicated a high affinity of the enzyme for NADH. The reaction catalyzed by the enzyme did not exhibit saturation kinetics with MDA up to 3 µM. A second order rate constant for the reduction of the enzyme-FAD with NADH was 1.25 10^8M s, as determined by a stopped-flow method, and its value decreased with increases in ionic strength, an indication of the enhanced electrostatic guidance of NADH to the enzyme-FAD.


INTRODUCTION

Since the first isolation of ascorbate (AsA) (^1)from Hungarian red pepper (Svirbery and Szent-Györgyi, 1933), it has been established that AsA functions as an antioxidant and protects cells from oxidative stress. The level of AsA in plant cells, as postulated from its initial isolation from plant tissues, is high as compared to that in mammalian cells, and an AsA-specific peroxidase scavenges hydrogen peroxide. In mammalian cells, by contrast, a selenium-containing glutathione peroxidase plays a major role (Asada, 1992). When AsA acts as an antioxidant in cells, in most cases, monodehydroascorbate radicals (MDA) are produced as the primary oxidation product. AsA peroxidase in plants generates MDA when it scavenges hydrogen peroxide (Hossain et al., 1984), as do guaiacol peroxidases such as horseradish peroxidase (Yamazaki and Piette, 1961). Superoxide and hydroxyl radicals oxidize AsA to MDA. Other organic oxidizing radicals, such as tocopherol chromanoxy, carbon-centered, aminooxy, peroxy, and phenoxy radicals, are generated under oxidative stress and generate MDA via their interactions with AsA (Bielski, 1982). The glutathione thiol radical is produced by the interaction of GSH with various radicals (Winterbourn, 1993), and it generates MDA as a result of its reaction with AsA (Forni et al., 1983). Thus, the MDA radical functions as a ``sink'' for radicals and active species of oxygen that are generated in cells under oxidative stress. In addition, MDA is generated via the autooxidation of AsA (Scarpa et al., 1983) and via the spontaneous oxidation of AsA by electron carriers such as cytochrome c, cytochrome b(5), and cytochrome b. Furthermore, MDA is produced during the enzymatic reactions catalyzed by AsA oxidase (Yamazaki and Piette, 1961), thyroid peroxidase (Nakamura and Ohtaki, 1993), and dopamine beta-monooxygenase (Dhariwal et al., 1991). De-epoxidation of violaxanthine to zeaxanthine in chloroplasts seems to be associated with a photoprotective function, and MDA is very probably generated in this reaction since AsA is required for the de-epoxidation reaction (Yamamoto et al., 1972).

To maintain the antioxidant activity of AsA, the regeneration of AsA from MDA is obviously indispensable. For example, in leaf cells, AsA is found at or above 10 mM in chloroplasts. However, from rates of the photoproduction of superoxide and hydrogen peroxide, it can be calculated that the AsA in chloroplasts is consumed within 80 s if no system in regeneration of AsA is operative in illuminated chloroplasts (Asada, 1994). Furthermore, several enzymes are inactivated by MDA (Davison et al., 1986, Harwood et al., 1986), and the toxicity of AsA to cells (Stich et al., 1976) might be attributable to MDA. Thus, it is essential to maintain a low steady state concentration of the MDA radical in cells.

The NADPH-dependent activity for regeneration of AsA from MDA has been found in mammalian tissue, but the enzyme that catalyzes the regeneration has not been yet purified. Cytochrome b and cytochrome b(5) reductase can reduce MDA (Iyanagi and Yamazaki, 1969; Nishino and Ito, 1986; Njus and Kelly, 1993), but the reactivity of MDA with reduced cytochrome b(5) reductase is several orders of magnitude lower than that of plant MDA reductase (Kobayashi et al., 1991). The activity for the reduction of MDA, with NAD(P)H as the electron donor, has been found in plants, and it is not only in chloroplasts (Hossain et al., 1984) but also in nonphotosynthetic tissues (Arrigoni et al., 1981; Bowditch and Donaldson, 1990) and in algae (Shigeoka et al., 1987; Miyake et al., 1991). It has also been demonstrated that the photoreduced ferredoxin in photosystem I of chloroplast thylakoids can reduce MDA at a high rate (approx10^7M s), which would contribute to the regeneration of AsA in the thylakoidal system for scavenging of hydrogen peroxide (Miyake and Asada, 1994).

MDA reductase is the first known enzyme that uses an organic radical as the substrate, and it catalyzes the following reaction: 2MDA + NAD(P)H + H 2AsA + NAD(P).

The enzyme has been purified from cucumber fruits (Hossain and Asada, 1985), soybean root nodules (Dalton et al., 1992), and potato tubers (Borraccino et al., 1986), and it has been characterized to be an FAD-enzyme with a molecular mass of 47 kDa. We have cloned cDNA for a cytosolic isozyme of MDA reductase from cucumber, and the entire sequence of its amino acid residues has been predicted from the nucleotide sequence. The sequence includes FAD and NAD(P) binding domains but exhibits only limited homology, in terms of amino acid sequence, to other flavoenzymes, even those from plants. It exhibits a greater homology to flavoenzymes from prokaryotes, such as putidaredoxin reductase and rubredoxin reductase (Sano and Asada, 1994). The sequence of amino acid residues of MDA reductase from pea has been deduced from its cDNA, and it also shows limited homology to other flavoenzymes (Murthy and Zilinskas, 1994). Thus, the unusual nature of MDA reductase is emphasized by its substrate, an organic radical, and also by the absence of similar flavoenzymes in mammalian and fungi.

For further characterization of the molecular properties of this enzyme, we established a system for high expression of native MDA reductase of cucumber in Escherichia coli. The coding region of the cDNA for the cytosolic isozyme of MDA reductase was inserted into a plasmid under the control of the T7 promoter, and the MDA reductase produced in E. coli was purified. The present communication describes the high expression of MDA reductase in E. coli, and purification and characterization of molecular properties of the enzyme.


MATERIALS AND METHODS

Construction of the Expression Plasmid

Plasmid pCMR31KS was derived from pBluescript II KS by insertion of the cDNA for cucumber MDA reductase, as described previously (Sano and Asada, 1994). The cDNA insert has two NcoI sites, one of which includes the first Met codon of the open reading frame. The plasmid was digested with NotI and blunt-ended with T4 DNA polymerase and dNTPs. The resultant linear DNA (14 µg) was partially digested with 10 units of NcoI at 37 °C for 15 min and was separated with agarose-gel electrophoresis to purify the 1.3-kilobase fragment of the cDNA digested only at NcoI site including the authentic initiation codon.

pET-8c (Studier et al., 1990), in which a unique NcoI site contains the first codon of the 10 gene adjacent to a T7 promoter, was used as the plasmid vector. pET-8c was digested with BamHI and blunt-ended by treatment with T4 DNA polymerase and dNTPs. It was digested with NcoI and dephosphorylated with calf intestinal alkaline phosphatase.

Two DNA fragments described above had one NcoI cohesive end and one blunt end each and ligated with T4 DNA ligase. After transformation of competent E. coli DH5alpha cells with the ligated DNA, plasmid DNA from ampicillin-resistant colonies was prepared and examined by restriction digestion to confirm that the construction was correct. The expression plasmid is referred to as pET-CMR (Fig. 1).


Figure 1: Construction of the expression plasmid, pET-CMR, for the overproduction of MDA reductase of cucumber. A portion of the cDNA clone with the sequence that encodes the whole protein of MDA reductase from pCMR31KS was ligated to the plasmid vector pET-8c via an NcoI site and a blunt end generated at a BamHI site. Solid boxes indicate the DNA fragment derived from the cDNA of MDA reductase from cucumber.



Bacterial Culture for Production of Cucumber MDA Reductase

Cells of E. coli strain BL21 (DE3) (Studier et al., 1990), which contains a chromosomal copy of the T7 RNA polymerase gene under the control of the lacUV5 promoter, were transformed with pET-CMR and inoculated into LB medium that contained 50 µg ml ampicillin. Isopropyl-1-thio-beta-D-galactoside (IPTG) (1 mM) was added to the culture medium 2 h after the start of the incubation at 37 °C, when OD was between 0.1 and 0.2, and the bacteria were grown for various additional times at 37 °C.

Preparation of the Bacterial Extract for Analysis

For analysis of whole cells, pelleted cells obtained by centrifugation from 1 ml of culture were suspended in 100 µl of the loading buffer for SDS-polyacrylamide gel electrophoresis (50 mM Tris-HCl, pH 6.8, 0.1 M dithiothreitol, 2% (w/v) SDS, 0.1% (w/v) bromphenol blue, and 10% (v/v) glycerol) and boiled for 3 min. For analysis of the soluble fraction, cells were suspended in one-tenth volume of extraction buffer (0.2 M HEPES-NaOH, pH 6.8, 10 mM 2-mercaptoethanol, and 0.5 mM EDTA) and sonicated twice by a Branson sonifier with a microtip at 3 Å for 5 s with 1-min cooling intervals on ice. The sonicated cells were centrifuged, and the supernatant was used as the soluble fraction.

Purification of MDA Reductase That Was Highly Expressed in E. coli

E. coli (strain BL21 (DE3)) cells that had been transformed with pET-CMR were grown in 20 ml of the LB medium that contained 50 µg ml ampicillin. After cells had reached late-logarithmic phase, the starter culture was inoculated to 2 liters of the same medium. After a 12-h incubation at 37 °C, the cells were harvested by centrifugation, washed with the extraction buffer, and stored at -20 °C. The frozen cells were thawed and resuspended in 200 ml of the extraction medium that contained 10 mM phenylmethanesulfonyl fluoride. The suspended cells were disrupted with a French pressure cell operated at about 500 kg cm. The disrupted cells were sonicated four times with a Branson sonifier with a standard tip at 10 Å for 20 s at 50% duty, with 1-min cooling intervals on ice, to disperse nucleic acids. After removal of cell debris by centrifugation, the supernatant was fractionated with ammonium sulfate (40-80% saturation). The precipitated proteins were dissolved in 50 ml of the buffer A (10 mM potassium phosphate, pH 8.2, 10 mM 2-mercaptoethanol, and 0.2 mM EDTA) that contained ammonium sulfate at 40% saturation. The enzyme solution was loaded on a column of TSKgel Butyl-Toyopearl 650 (Tosoh, Tokyo, Japan; 26 mm inside diameter 300 mm) that had been equilibrated with buffer A plus ammonium sulfate at 40% saturation. After washing of the column with 2 volumes of the equilibration medium, a 450-ml linear gradient from 40% to 0% saturation with ammonium sulfate in buffer A was applied. Peak fractions containing MDA reductase were pooled and dialyzed four times against three liters of buffer B (10 mM potassium phosphate, pH 7.0, 10 mM 2-mercaptoethanol, and 0.1 mM EDTA).

The dialyzed enzyme was then applied to a column of Q Sepharose High Performance 26/10 (Pharmacia Biotech Inc.) that had been equilibrated with buffer B. After extensive washing of the column with buffer B, the enzyme was eluted by a 150-ml linear gradient from 0 to 0.2 M KCl in buffer B. The active fractions were pooled, concentrated, and equilibrated with buffer B by ultrafiltration through a PM-10 membrane filter (Amicon). Above column chromatographies were performed with a fast-protein liquid chromatography system (Pharmacia, Uppsala, Sweden).

Crystallization

Crystals were grown by the hanging drop method in plastic cell culture plates with siliconized coverslips. Each droplet contained 2 µl of a solution of MDA reductase (12 mg ml) in 50 mM HEPES-NaOH, pH 7.6, and 2 µl of Crystal Screen precipitant (Hampton Research, Riverside, CA). Each droplet was hung over a 0.7-ml reservoir of the corresponding precipitants. The cell culture plates were incubated at 17 °C.

Western Blotting

Proteins in bacterial extracts were separated by SDS-polyacrylamide gel electrophoresis and electroblotted onto a polyvinylidene difluoride membrane (PVDF Protein Sequencing Membrane, Bio-Rad). The membrane was reacted with the first antibody (raised in rabbit against MDA reductase purified from cucumber fruits) and then with the second antibody (alkaline phosphatase-conjugated antibody raised in goat against rabbit IgG; Jackson Immunoresearch). After washing, color was developed with 5-bromo-4-chloro-3-indolyl phosphate and nitro blue tetrazolium.

Assays of Enzyme and Protein

The activity of MDA reductase was measured as described by Hossain and Asada(1985). One unit of MDA reductase was defined as the amount of enzyme that oxidizes 1 µmol of NADH min in the presence of 3 µM MDA, generated by the AsA-AsA oxidase system. Concentrations of protein were determined with Coomassie Brilliant Blue G-250 using bovine serum albumin as the standard, as described by Bradford(1976). The concentration of purified MDA reductase was determined on the assumption that its absorption coefficient at 450 nm is 9.63 mM cm (Hossain and Asada, 1985).

Stopped-flow Analysis

MDA reductase and NADH, both in 50 mM HEPES-NaOH at pH 7.8, were rapidly mixed in a Union Giken stopped-flow rapid reaction analyzer (model RA-401, Osaka, Japan) in a 2-mm reaction cell. The reduction of the FAD of MDA reductase by NADH was followed by monitoring the decrease in the absorbance at 452.9 nm after rapid mixing.

Determination of Thiol Groups

To block the thiol groups of MDA reductase (37.3 nmol in 1 ml of 50 mM HEPES-NaOH, pH 7.6), the enzyme was incubated with 55.5 nmol of p-chloromercuribenzoate (pCMB). The number of exposed thiol groups in the native enzyme was determined from the increase in absorbance at 410 nm upon the addition of 0.1 mM 5,5`-dithiobis(2-nitrobenzoic acid) (DTNB) to 14 nmol of MDA reductase in 1 ml of 50 mM HEPES-NaOH, pH 7.6 (Ellman, 1959). The total number of thiol groups per molecule of the enzyme was determined by incubation of the enzyme in 0.5% (w/v) SDS. The absorption coefficient at 410 nm of 3-carboxy-4-nitrothiophenolate, which is the product of the reaction of DTNB with a thiol group, was assumed to be 13,600 M cm (Ellman, 1959).


RESULTS AND DISCUSSION

Expression of Recombinant MDA Reductase in E. coli and Its Purification

The proteins from E. coli BL21(DE3) cells, cultured in LB medium, were analyzed by SDS-polyacrylamide gel electrophoresis and Western blotting. A distinct band of protein with the molecular mass predicted from the open reading frame of the cDNA (47 kDa) was detected by Coomassie Brilliant Blue staining (data not shown) in the lanes that correspond to the cells that harbored pET-CMR and confirmed to be MDA reductase by Western blotting in the extracts from cultures incubated both in the presence and the absence of IPTG (Fig. 2). Thus, T7 RNA polymerase was expressed in a leaky manner without induction by IPTG, and it transcribed the cDNA for MDA reductase on the plasmid. Fragmentation of MDA reductase probably by proteases may have occurred in E. coli both in the presence and absence of IPTG when the cells were cultured for more than 2 h (Fig. 2).


Figure 2: Detection of MDA reductase of cucumber by Western blotting with antibody against MDA reductase from cucumber fruits after SDS-polyacrylamide gel electrophoresis. The E. coli cells from 1 ml of culture at 37 °C were suspended in 100 µl of loading buffer for electrophoresis and boiled for 3 min. The extract of whole cells (2 µl) was subjected to SDS-polyacrylamide gel electrophoresis. Lanes 1-3, bacteria without plasmids; lanes 4-6, bacteria that harbored pET-CMR; lanes 1 and 4, incubated for 2 h without IPTG; lanes 2 and 5, incubated for 4 h without IPTG; lanes 3 and 5, incubated for 2 h without IPTG and for an additional 2 h in the presence of 1 mM IPTG.



A soluble fraction from the cells transformed with pET-CMR, prepared after incubation for various times in LB medium in the presence and absence of IPTG, catalyzed the NADH-dependent reduction of MDA, but that from cells without the plasmid did not. Although the amount of MDA reductase expressed in E. coli cells in response to IPTG was larger than that in noninduced cells, as determined by Western analysis, higher activity of MDA reductase was found in the soluble fraction when cells were incubated in LB medium for 12 h without the induction by IPTG than after induction by IPTG (data not shown). A larger fraction of the MDA reductase protein, expressed in the induced cells, might have formed insoluble inclusion bodies in the latter case. We observed the maximal activity of MDA reductase under the culture conditions described under ``Materials and Methods.''

A soluble extract of E. coli cells that harbored pET-CMR and had been cultured in LB medium at 37 °C for 12 h without induction has a specific activity of about 40 units mg of protein, which was about 80-fold higher than that in extracts of cucumber fruits. MDA reductase accounted for nearly 20% of the soluble protein in the E. coli cells. The enzyme was purified to homogeneity by a simple procedure with a yield of about 45 mg from 2 liters of culture, as summarized in Table 1. The analysis by SDS-polyacrylamide gel electrophoresis of the purified enzyme gave a molecular mass of 47 kDa, as expected from the open reading frame of the cDNA (Sano and Asada, 1994), and the specific activity of the purified enzyme was similar to that of MDA reductase purified from cucumber fruits (Hossain and Asada, 1985). The purified enzyme was stable for at least 6 months when stored at -85 °C in 10 mM HEPES-NaOH, pH 7.0, 10 mM 2-mercaptoethanol, and 0.1 mM EDTA. Recombinant MDA reductase crystallized as yellow needles in a precipitant that contained 0.2 M calcium acetate, 0.1 M sodium cacodylate, pH 6.5, and 18% (w/v) polyethylene glycol 8000 over the course of 2 weeks (Fig. 3).




Figure 3: Crystals of MDA reductase of cucumber highly expressed in E. coli. Bar represents 200 µm.



Spectral and Redox Properties

The purified recombinant MDA reductase showed an absorption spectrum in the visible region very similar to that of the enzyme purified from cucumber fruits (Hossain and Asada, 1985) (Fig. 4), but the absorbance of a shoulder at 476 nm was higher, and a slight blue shift of the absorption peaks of flavin (442 and 476 nm) was seen as compared with the spectrum of the enzyme from cucumber fruits (447.3 and 475 nm). The anaerobic addition of 0.96 mol of NADH per mol of the enzyme-bound FAD yielded the spectrum of the fully reduced enzyme, as reported by Hossain and Asada(1985), without formation of a stable semiquinone or intermediate (Fig. 4). Thus, the enzyme accepts two electrons from NADH per molecule of the enzyme-bound FAD, indicating that the FAD is the only redox group associated with the enzyme. The reduced enzyme existed as a charge-transfer complex between NAD and reduced flavin, since its spectrum has a characteristic flat region from 500 to 700 nm.


Figure 4: Anaerobic titration of recombinant MDA reductase with NADH. Oxidized MDA reductase (62.6 nmol) in 1 ml of 50 mM potassium phosphate, pH 7.0, was rendered anaerobic by repeated evacuation and flushing with argon in an optical cell used for anaerobic titration (Iyanagi et al., 1974). Nitrogen was passed at a low rate through the gas lock that protected the cell unit from air, and the enzyme was titrated with 5 mM NADH in the same buffer with a gas-tight Hamilton microsyringe. The absorption spectra from the top to the bottom correspond to those of the enzyme after the addition of 0, 0.16, 0.32, 0.48, 0.64, 0.80, and 0.96 eq of NADH relative to the enzyme.



The fully reduced enzyme was then back-titrated with the MDA radical, which was continuously generated by the AsA-AsA oxidase system (Fig. 5). The reduced enzyme was completely oxidized when 2.18 mol of MDA radicals were generated per mol of MDA reductase. During the oxidation process, the absorption spectrum of the semiquinone form could not be detected, although a blue-shifted peak of the oxidized flavin around 370 nm was observed at an early stage of the oxidation.


Figure 5: Back-titration of reduced recombinant MDA reductase with the MDA radical. Oxidized MDA reductase (50.3 nmol) in 1 ml of 50 mM potassium phosphate, pH 7.0, that contained 0.5 mM AsA (spectrum 1), was first reduced with 1.01 molar eq of NADH (spectrum 2). The reduced enzyme was then titrated with the MDA radical, which was generated by the reaction catalyzed with 5 microunits of AsA oxidase at 5 nmol min under aerobic conditions, and absorption spectra were recorded 4 min, 8 min, 12 min, 16 min, and 20 min after the addition of AsA oxidase. Finally, 22 min after the addition of AsA oxidase, when the accumulated production of MDA had reached 110 nmol, MDA reductase had the same spectrum as the oxidized enzyme (spectrum 1). Scanning time: 100 s.



Spectrum of the Flavosemiquinone Form

Flavoenzymes reduced by two electrons are oxidized by electron acceptors via a semiquinone form (Strittmatter, 1965). Most flavoenzymes form either a blue or a red semiquinone independently of the external pH with the exception of glucose oxidase (Massey and Palmer, 1966). The blue semiquinone reflects a hydrogen bond between an amino acid residue and N-5 of the flavin, and the red semiquinone reflects one between an amino acid residue and N(1)-C(2)-O of the flavin (Massey and Hemmerich, 1980).

The electron acceptor of MDA reductase is the MDA radical, and the NADH-reduced enzyme should be oxidized via two successive oxidations by two MDA radicals. Therefore, the semiquinone form of the enzyme should be formed as an intermediate, but static titration of the reduced enzyme did not allow us to show a spectrum of the semiquinone. Flavoproteins can be reduced by illumination under anaerobic conditions in the presence of EDTA as the electron donor (Massey and Palmer, 1966). The semiquinone form is stabilized by binding of NAD as a catalytic intermediate, as shown for ferredoxin-NADP reductase (Keirns and Wang, 1972), adrenodoxin reductase (Kitagawa et al., 1982), and cytochrome b(5) reductase (Iyanagi, 1977). The spectrum of the NADH-reduced MDA reductase indicates the formation of a stable charge-transfer complex (Fig. 4), as in the case of cytochrome b(5) reductase (Iyanagi, 1977). Therefore, photoreduction of MDA reductase was performed in the presence of NAD at a molar ratio of 1:1 with the enzyme under anaerobic conditions using EDTA as the electron donor. During illumination, a new spectrum with a peak at 370 nm and a flat absorption in the long-wavelength region was generated (Fig. 6). This spectrum is characteristic of NAD-bound, red semiquinone forms in flavoenzymes of the dehydrogenase-oxidase group (Massey and Hemmerich, 1980). Thus, the NAD bound semiquinone, which can infer the spectrum change at an early stage of oxidation of the reduced enzyme by MDA (Fig. 5).


Figure 6: Photoreduction of recombinant MDA reductase under anaerobic conditions in the presence of EDTA. MDA reductase (74.7 nmol) in 1 ml of 50 mM HEPES-NaOH, pH 7.6, that contained 50 mM EDTA and 75 µM NAD was rendered anaerobic by repeated evacuation and flushing with argon, and it was illuminated with a 650-watt tungsten lamp at 10 °C. The absorption spectra of the photoreduced enzyme were recorded at the indicated times after the start of illumination.



Thiol Groups

MDA reductase is inhibited by thiol-modifying reagents (Hossain and Asada, 1985, Borraccino et al., 1986, Dalton et al., 1992, Murthy and Zilinskas, 1994) and it contains two Cys residues, at positions 69 and 198, of the enzyme from cucumber and also from pea (Sano and Asada, 1994, Murthy and Zilinskas, 1994). The addition of DTNB to the recombinant MDA reductase caused rapid and slow increases in absorbance at 410 nm, which corresponded to 0.63 and 1.4 mol of thiol groups per mol of enzyme 10 min and 5 h after the addition of DTNB, respectively. Thus, one thiol group in the native enzyme reacted rapidly with DTNB, but the remaining one reacted only slowly. By contrast, when the enzyme was incubated with DTNB in 0.5% (w/v) SDS for 10 min, an increase in absorbance at 410 nm occurred that corresponded to 1.8 mol of thiol groups per mol of enzyme, as expected from the predicted sequence. Thus, the two Cys residues predicted from the cDNA (Cys-69 and -198) do not form a disulfide bridge.

Preincubation of recombinant MDA reductase with 1.5 mol eq of pCMB for 10 min inhibited the reduction of FAD by NADH, as determined by the decrease in absorbance at 450 nm (Fig. 7), as is the case for the enzyme purified from cucumber fruits (Hossain and Asada, 1985). Thus, one Cys residue seems to participate in the reduction of the enzyme-FAD by NADH. Neither of the two Cys residues in MDA reductase is conserved in other flavin-containing oxidoreductases (Sano and Asada, 1994), and it is not known which Cys residue reacts rapidly with thiol reagents and participates in the transfer of electrons from NADH to the FAD. Cys-198 of the enzyme from cucumber is located near the putative NADH binding domain (Sano and Asada, 1994) and could participate in electron transfer between NADH and the enzyme-FAD.


Figure 7: Blockage of the transfer of electron from NADH to recombinant MDA reductase-FAD by preincubation of the enzyme with pCMB. The spectra of the recombinant MDA reductase (37.3 nmol) were recorded in 1 ml of 50 mM HEPES-NaOH, pH 7.6, under aerobic conditions. Curve 1, oxidized enzyme; curve 2, enzyme that had been fully reduced with 0.99 mol eq of NADH; curve 3, enzyme that had been incubated with 1.5 mol eq of pCMB for 10 min, and then with an additional 0.99 mol eq of NADH.



K(m)Values for NADH and NADPH

The K values for the electron donors, NADH and NADPH, of the recombinant MDA reductase at 3 µM MDA were determined to be 4.4 µM and 210 µM, respectively, from plots of [S]/v versus [S](CornishBowden, 1979) (Table 2). The K for NADH of the recombinant enzyme is similar to that of the enzyme from cucumber fruits, but the Kfor NADPH is 9-fold higher than that of the cucumber enzyme (Hossain and Asada, 1985). The K for MDA radicals could not be estimated because the enzyme did not exhibit saturation kinetics below 3 µM MDA, which is the maximum concentration generated by AsA oxidase as a consequence of an increase in the rate of disproportionation of the radical. The molecular activities of the recombinant MDA reductase (V) were estimated to be 175 mol of NADH oxidized mol of enzyme s and 33 mol of NADPH mol of enzyme s when the concentration of MDA was 3 µM. Thus, the V of the recombinant enzyme also is lower when NADPH is the electron donor than when NADH is the donor.



The K values for NADH and NADPH of MDA reductases from various plants are summarized in Table 2. These data allow us to divide MDA reductases into two groups. The enzyme from soybean root nodules and the recombinant enzyme from cucumber are characterized by a low specificity for NADPH. Other MDA reductases, purified from cucumber fruits, spinach, and potato tubers, gave only severalfold higher values of K for NADPH than those for NADH. Although the amino acid sequence of cytosolic MDA reductase predicted from pea cDNA had a high degree of homology (78%) to that of cucumber, the fusion protein of MDA reductase of pea with a maltose-binding protein did not show high specificity for NADH (Murthy and Zilinskas, 1994). The domain of the maltose-binding protein might affect the interaction of electron donors with the fused pea enzyme.

Specificity for Electron Acceptors

The MDA reductase that we overexpressed in E. coli is a cytosolic isozyme of cucumber, and its deduced amino acid sequence differed by 16% from that of the purified enzyme from cucumber fruits (Sano and Asada, 1994). However, the recombinant enzyme had specificity for its electron acceptors similar to that of the purified enzyme (Hossain and Asada, 1985). In addition to the MDA radical, the recombinant MDA reductase was capable of catalyzing the reduction of ferricyanide and 2,6-dichlorophenolindophenol. However, cytochrome c, dehydroascorbate, methylene blue, GSSG, and ferredoxin were ineffective as the electron acceptors. Among quinones, p-benzoquinone could serve as an acceptor, but menadione and alpha-naphthoquinone could not (Table 3). This specificity is similar not only to that of MDA reductase from cucumber fruits but also to that of the enzyme from soybean root nodules (Dalton et al., 1992). The high specificity for the MDA radical distinguishes the recombinant enzyme from the FAD-containing enzymes menadione reductase (Spitzberg and Coscia, 1982), DT diaphorase, glutathione reductase, and ferredoxin-NADP reductase. The extent of sequence homology between MDA reductase and the aforementioned flavoproteins is very low (Sano and Asada, 1994). Therefore, the high specificity of MDA reductase for the MDA radical is not unexpected. It is of interest to note that MDA reductase cannot reduce ferredoxin, and the extent of sequence homology between MDA reductase and ferredoxin-NADP reductase is low. The MDA reductase from cucumber has rather high sequence homology to several non-heme iron reductases from bacteria (Sano and Asada, 1994). The specificity for electron acceptors of the recombinant enzyme provides further evidence that the cDNA isolated by immunoscreening with antiserum against MDA reductase from cucumber fruits encodes an isozyme of MDA reductase.



Inhibition by Dicumarol

Dicumarol very strongly inhibits menadione reductase, with a K of the order of 10 nM. The inhibition is competitive with respect to NAD(P)H but independent of the concentration of the electron acceptor (Ernster et al., 1962). The MDA reductase purified from cucumber fruits was not inhibited by dicumarol up to 0.5 mM (Hossain and Asada, 1985). The recombinant enzyme was, however, inhibited not only when the MDA radical was the electron acceptor but also when ferricyanide, 2,6-dichlorophenolindophenol, and p-benzoquinone were used. The MDA-reducing activity of MDA reductase was suppressed by 90% by 0.5 mM dicumarol (Table 4). When equimolar NADH was added to the oxidized enzyme in the presence of 0.5 mM dicumarol, the enzyme was fully reduced, as judged from the absorption spectrum (data not shown). Thus, dicumarol did not inhibit the reduction of the FAD of MDA reductase by NADH, unlike its action on menadione reductase. Dixon plots (Dixon, 1972) indicated that the inhibition by dicumarol of recombinant MDA reductase was competitive to the MDA radical, and the K value is estimated to be 74.3 µM (Fig. 8). Since the electron acceptor, but not the electron donor, competed with dicumarol and the K values are different from each other, the mechanism of inhibition of the recombinant MDA reductase by dicumarol is different from that of menadione reductase.




Figure 8: Dixon plot of the initial velocity of the reaction catalyzed by recombinant MDA reductase at various concentrations of dicumarol with 2 µM and 3 µM MDA. Assays were carried out under the standard conditions with the addition of dicumarol at indicated concentrations.



Rate Constant for the Reduction of the Enzyme-FAD by NADH

The reaction kinetics of MDA reductase show that the reaction proceeds via a ping-pong mechanism, as follows (Hossain and Asada, 1985):


The enzyme-bound FAD (E-FAD) is reduced by NADH, and a charge-transfer complex (E-FADH(2)bulletNAD) is formed (Fig. 4). The reduced enzyme donates electrons to MDA by two successive one-electron transfers, and a red semiquinone form (E-FADbulletNAD) is thought to be the intermediate (Fig. 6). The second order rate constant for the reduction of the enzyme-bound FAD by NADH (k(1)) was determined by a stopped-flow analysis, which was monitored at 452.9 nm after rapid mixing. When we tried to determine the rate under the pseudo-first order conditions (10 µM enzyme and 100 µM NADH), almost all of the enzyme-FAD was reduced within the dead time after the mixing of 450 µs of the instrument. This result corresponds to a rate above 10^8M s, and so we could not determine the rate accurately. The reduction of the enzyme-FAD by NADH in a second order mode (10 µM enzyme and 10 µM NADH) allowed us to determine the rate (Fig. 9A). The reciprocal plot of the oxidized E-FAD against time after mixing (Fig. 9B) gives a straight line, and k(1) is estimated from its slope to be 1.25 10^8M s at pH 7.0. The rate constant was not affected by buffers, when either 50 mM HEPES-KOH or 50 mM potassium phosphate at pH 7.8 was used. The effect of pH on the rate of reduction of E-FAD by NADH was determined (Fig. 10). Between pH 5.5 and 7, the rate was highest and constant, and the rate decreased gradually with increases in pH. It should be noted that the pK of cysteine is around pH 8.5 and either Cys-69 or Cys-198 participates in the reduction of E-FAD by NADH, as discussed above. It appears, therefore, that the dissociation of either Cys residue lowers the interaction of the E-FAD with NADH. The pH optimum of the overall reaction is in a range from pH 7 to pH 9 (Hossain and Asada, 1985, Dalton et al., 1992), suggesting that the rates of reactions 2 and 3 are high above pH 7.


Figure 9: Reduction of the FAD of MDA reductase by NADH after rapid mixing. MDA reductase (MDAR) and NADH at equimolar concentrations (10 µM) in 50 mM HEPES-NaOH, pH 7.8, were mixed rapidly in a stopped-flow apparatus, and the reduction of FAD was followed as the increase in transmittance at 452.9 nm. For improvement of the S/N ratio, the figure represents the average of four determinations (A). The reciprocal of the concentration of the oxidized enzyme is plotted against the time after the mixing (B).




Figure 10: Effects of pH on the reaction rate constants (k(1)) for the reduction of the FAD of MDA reductase by NADH. The assay conditions were the same as in Fig. 9, except that the following buffers were used: pH 5.5-6.0, 50 mM MES-KOH; pH 7-8, 50 mM HEPES-KOH; pH 9, bis-tris propane-KOH.



The maximal rate for bimolecular collisions is 8.4 10^9M s in water at 30 °C, and it is independent of their molecular sizes (Marshall, 1978). Assuming that MDA reductase is a sphere and the density of the enzyme is equal to that of hemoglobin, we can calculate that the ratio of the area of the isoalloxazine ring of FAD to the total surface of the enzyme is only 0.03%. Therefore, the maximal collision rate of NADH with E-FAD is 2.5 10^6M s. Thus, the observed value of k(1) is 44-fold higher than the estimated collision rate, and the interaction of NADH with E-FAD appears to be facilitated by a mechanism such as the electrostatic guidance of the electron donor to the FAD. At neutral pH, NADH is present mostly in an anionic form since its pK is 3.9, and ionic interactions are assumed to participate in the guidance of NADH to E-FAD. To examine such ionic interactions, k(1) was determined at various concentrations of NaCl (Fig. 11). With increases in ionic strength, the rate of reduction of E-FAD by NADH fell to 8.5 l0^6M s, with an inflection point at 0.74 (0.5 M NaCl), when the rate was plotted against ionic strength. At present, it is not known why the plot of k(1) against ionic strength shows an inflection at 0.5 M NaCl, but the conformation change of the enzyme by the salt is likely to affect the reduction rate by NADH. The rate constant was also lowered in phosphate buffer at its high concentrations (data not shown). The 1 M NaCl-suppressed rate was similar to the estimated rate of bimolecular collisions. The present results support the proposed enhanced electrostatic guidance of NADH to the isoalloxazine ring of the enzyme-FAD by positively charged amino acid residues. We have not identified the participating residues of the enzyme. However, three Lys residues (159, 161, and 165) and one Arg residue (183) are found around the putative NADH binding domain of NADH (Lys-162 to Leu-182 and Met-192 to Asp-195 with a loop between them) of MDA reductase (Sano and Asada, 1994).


Figure 11: Effects of NaCl on the reaction rate constants (k(1)) for the reduction of the FAD of MDA reductase by NADH at pH 7.8. The assay conditions were the same as in Fig. 9, except for the addition of NaCl at various concentrations up to 1 M.



Isozymes of MDA Reductase from Cucumber

During the purification of MDA reductase from cucumber fruits, four isoforms were found in DEAE-Sephacel chromatography (Hossain and Asada, 1985). Dalton et al.(1992) also reported the existence of two isozymes of MDA reductase in soybean root nodules. Intact chloroplasts contain MDA reductase (Hossain et al., 1984), in addition to dehydroascorbate reductase (Hossain and Asada, 1984), for the regeneration of AsA. Thus, MDA reductase is localized not only in chloroplasts but also in other cell compartments, and different isozymes might be localized in each compartment. The sequence of amino acid residues predicted from the cDNA used for high expression in E. coli does not have a transit peptide for targeting to cell organelles (Sano and Asada, 1994), and it does not agree completely to that of MDA reductase purified from cucumber fruits. Reflecting the differences between them, the two isozymes of MDA reductase are distinguishable by the specificity of their electron donors, their affinity for the MDA radical, and inhibition by dicumarol. The isozyme of MDA reductase encoded in the cDNA used for the present high expression system is probably localized in the cytosol of cucumber, but the cellular location of the enzyme purified from the fruits (Hossain and Asada, 1985) is not yet known.

Concluding Remarks

The present system of high expression for cytosolic isozyme of MDA reductase from cucumber in E. coli allowed us to purify and to crystallize the enzyme with simple purification steps. The recombinant enzyme prefers NADH as the electron donor to NADPH. The reduction of the enzyme-FAD by NADH (reaction 1) proceeds at a diffusion-controlled rate of 1.1 10^8M s (Fig. 9), and either Cys-69 or Cys-198 participates (Fig. 7). This rapid reaction could not be accounted for by simple bimolecular collisions, and it is facilitated by enhanced electrostatic guidance of NADH by cationic amino acid residues. The steps in the oxidation of the reduced enzyme by MDA (reactions 2 and 3) also has been shown to proceed at rate similar to reaction 1 via the red semiquinone form (Fig. 6), with electrostatic guidance of the MDA anion radical to the reduced flavin. (^1)Thus, as in the case of Cu,Zn-superoxide dismutase, in which electrostatic guidance of the superoxide anion radical to the copper center of the enzyme by the conserved cationic amino acid residues facilitates the diffusion-controlled disproportionation of superoxide (Getzoff et al., 1992), the cationic amino acid residues of MDA reductase seem to facilitate rapid interactions between both the electron donor and the electron acceptor with the enzyme-FAD. Actually, the overall cycle of the MDA reductase-catalyzed reaction is suppressed at higher ionic strength (Hossain and Asada, 1985).


FOOTNOTES

*
This work was supported by Grant-in-Aid on Priority Areas 04273101 from the Ministry of Education, Science and Culture of Japan and also by a grant from the Human Frontier Science Program. The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore by hereby marked ``advertisement'' in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

§
Present address: Plant Molecular Physiology Laboratory, Research Institute of Innovative Technology for the Earth (RITE), Kizu, Kyoto 619-02, Japan.

To whom correspondence should be addressed. Tel.: 81-774-31-8119; Fax: 81-774-31-8119.

(^1)
The abbreviations used are: AsA, ascorbate; DTNB, 5,5`-dithiobis(2-nitrobenzoic acid); IPTG, isopropyl-1-thio-beta-D-galactoside; MDA, monodehydroascorbate radical; pCMB, p-chloromercuribenzoate; MES, 4-morpholineethanesulfonic acid; bis-tris, 2-[bis(2-hydroxyethyl)amino]-2-(hydroxymethyl)-propane-1,3-diol.

(^2)
K. Kobayashi, S. Tagawa, S. Sano, and K. Aasad, submitted for publication.


REFERENCES

  1. Asada, K. (1992) Physiol. Plant. 85,235-241 [CrossRef]
  2. Asada, K. (1994) in Causes of Photooxidative Stress and Amelioration of Defense Systems in Plants (Foyer, C. H., and Mullineaux, P. M., eds) pp. 77-104, CRC Press, Boca Raton, FL
  3. Arrigoni, O., Dipierro, S., and Borraccino, G. (1981) FEBS Lett. 125,242-244 [CrossRef]
  4. Bielski, B. H. J. (1982) in Ascorbic Acid: Chemistry, Metabolism and Uses (Seib, P. A., and Tolbert, B. M., eds) pp. 81-100, American Chemical Society, Washington, D. C.
  5. Borraccino, G., Dipierro, S., and Arrigoni, O. (1986) Planta 167,521-526
  6. Bowditch, M. I., and Donaldson, R. P. (1990) Plant Physiol. 94,531-537
  7. Bradford, M. M. (1976) Anal. Biochem. 72,248-254 [CrossRef][Medline] [Order article via Infotrieve]
  8. Cornish-Bowden, A. (1979) Fundamentals of Enzyme Kinetics , ButterworthHeinemann Ltd., London
  9. Dalton, D. A., Langeberg, L., and Robbins, M. (1992) Arch. Biochem. Biophys. 292,281-286 [Medline] [Order article via Infotrieve]
  10. Davison, A. J., Kettle, A. J., and Fatur, D. J. (1986) J. Biol. Chem. 261,1193-1200 [Abstract/Free Full Text]
  11. Dhariwal, K. R., Black, C. D. V., and Levine, M. (1991) J. Biol. Chem. 266,12908-12914 [Abstract/Free Full Text]
  12. Dixon, M. (1972) Biochem. J. 129,197-202 [Medline] [Order article via Infotrieve]
  13. Ellman, G. L. (1959) Arch. Biochem. Biophys. 82,70-77 [Medline] [Order article via Infotrieve]
  14. Ernster, L., Danielson, L., and Ljunggren, M. (1962) Biochim. Biophys. Acta 58,171-188
  15. Forni, L. G., Mönig, J., Mora-Arellano, V. O., and Wilson, R. L. (1983) J. Chem. Soc. Perkin Trans. 2,961-965
  16. Getzoff, E. D., Cabelli, D. E., Fisher, C. L., Parge, H. E., Viezzoli, M. S., Banci, L., and Hallewell, R. A. (1992) Nature 358,347-351 [CrossRef][Medline] [Order article via Infotrieve]
  17. Harwood, H. J., Jr., Greene, Y. J., and Stacpoole, P. W. (1986) J. Biol. Chem. 261,7127-7135 [Abstract/Free Full Text]
  18. Hossain, M. A., and Asada, K. (l984) Plant Cell Physiol. 25,85-92
  19. Hossain, M. A., and Asada, K. (1985) J. Biol. Chem. 260,12920-12926 [Abstract/Free Full Text]
  20. Hossain, M. A., Nakano, Y., and Asada, K. (1984) Plant Cell Physiol. 25,385-395
  21. Iyanagi, T. (1977) Biochemistry 16,2725-2730 [Medline] [Order article via Infotrieve]
  22. Iyanagi, T., and Yamazaki, I. (1969) Biochim. Biophys. Acta 172,370-381 [Medline] [Order article via Infotrieve]
  23. Iyanagi, T., Makino, N., and Mason, H. S. (1974) Biochemistry 13,1701-1710 [Medline] [Order article via Infotrieve]
  24. Keirns, J. J., and Wang, J. H. (1972) J. Biol. Chem. 247,7374-7382 [Abstract/Free Full Text]
  25. Kitagawa, T., Sakamoto, H., Sugiyama, T., and Yamano, T. (1982) J. Biol. Chem. 257,12075-12080 [Free Full Text]
  26. Kobayashi, K., Harada, Y., and Hayashi, K. (1991) J. Biol. Chem. 30,8310-8315
  27. Marshall, A. G. (1978) Biophysical Chemistry: Principles, Techniques and Applications , pp. 546-547, John Wiley & Sons, New York
  28. Massey, V., and Hemmerich, P. (1980) Biochem. Soc. Trans. 8,246-257 [Medline] [Order article via Infotrieve]
  29. Massey, V., and Palmer, G. (1966) Biochemistry 5,3181-3189 [Medline] [Order article via Infotrieve]
  30. Miyake, C., and Asada, K. (1994) Plant Cell Physiol. 35,539-549
  31. Miyake, C., Michihata, F., and Asada, K. (l99l) Plant Cell Physiol. 32,33-43
  32. Murthy, S. S., and Zilinskas, B. A. (1994) J. Biol. Chem. 269,31129-31133 [Abstract/Free Full Text]
  33. Nakamura, M., and Ohtaki, S. (1993) Arch. Biochem. Biophys. 305,84-90 [CrossRef][Medline] [Order article via Infotrieve]
  34. Nishino, H., and Ito, A. (1986) J. Biochem. (Tokyo) 100,1523-1531 [Abstract]
  35. Njus, D., and Kelley, P. M. (1993) Biochim. Biophys. Acta 1144,235-248 [Medline] [Order article via Infotrieve]
  36. Sano, S., and Asada, K. (1994) Plant Cell Physiol. 35,425-437 [Medline] [Order article via Infotrieve]
  37. Scarpa, M., Stevanato, R., Viglino, P., and Rigo, A. (1983) J. Biol. Chem. 258,6695-6697 [Abstract/Free Full Text]
  38. Shigeoka, S., Yasumoto, R., Onishi, T., Nakano, Y., and Kitaoka, S. (1987) J. Gen. Microbiol. 133,227-232
  39. Spitzberg, V. L., and Coscia, C. J. (1982) Eur. J. Biochem. 127,67-70 [Abstract]
  40. Stich, H. F., Karim, J., Koropatnick, J., and Lo, L. (1976) Nature 260,722-724 [Medline] [Order article via Infotrieve]
  41. Strittmatter, P. (1965) J. Biol. Chem. 240,1405-1411 [Free Full Text]
  42. Studier, F. W., Rosenberg, A. H., Dunn, J. J., and Dubendorff, J. W. (1990) Methods Enzymol. 185,60-89 [Medline] [Order article via Infotrieve]
  43. Svirbery, J. L., and Szent-Györgyi, A. (1933) Biochem. J. 27,279-285
  44. Winterbourn, C. C. (1993) Free Rad. Biol. Med. 14,85-90 [CrossRef][Medline] [Order article via Infotrieve]
  45. Yamamoto, H. Y., Kamite, L., and Wang, Y-Y. (1972) Plant Physiol. 49,224-228
  46. Yamazaki, I., and Piette, L. (1961) Biochim. Biophys. Acta 50,62-69 [CrossRef][Medline] [Order article via Infotrieve]

©1995 by The American Society for Biochemistry and Molecular Biology, Inc.