1 Department of Genetics, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA
2 Howard Hughes Medical Institute, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA
Present address: Department of Molecular Medicine, NRB Floor 6, Office 621, 364 Plantation Street, Worcester, MA 01615, USA
*Author for correspondence (e-mail: cmicchel{at}genetics.med.harvard.edu)
Accepted 6 November 2001
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SUMMARY |
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Key words: rasp, hedgehog, Acyltransferase, Wing imaginal disc, Drosophila
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INTRODUCTION |
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One emerging generalization is that Hh patterns a tissue through the establishment of discrete organizing centers (Lawrence and Struhl, 1996). Hh can act both as a short-range inducer and as a long-range morphogen in patterning. For example, in the Drosophila wing imaginal disc epithelium Hh is produced in presumptive posterior cells under the control of engrailed (en) (Zecca et al., 1995
), a transcription factor, that functions as a selector gene for posterior identity. En also prevents posterior cells from responding to the Hh signal (Sanicola et al., 1995
; Tabata et al., 1995
; Zecca et al., 1995
). Consequently, only anterior cells respond to Hh by activating target genes in a narrow stripe adjacent to the anteroposterior (AP) boundary. One such target is decapentapalegic (dpp), which encodes a morphogen that can signal over a long range to specify cell fates in both the anterior and posterior of the wing (Lecuit et al., 1996
; Nellen et al., 1996
). However, in other contexts, Hh itself can act as a long-range morphogen, as shown in the adult abdomen (Struhl et al., 1997a
; Struhl et al., 1997b
). Specific regulation of both the range of Hh movement and Hh activity at organizing centers will therefore determine many aspects of a tissues overall pattern.
The post-translational modification of Hh appears to be crucial in regulating both the range of Hh signaling and its activity. Biochemical studies suggest that two distinct activities reside within the full-length precursor form of Hh. The N-terminal fragment is required for signaling, and is liberated from the C terminus by an intramolecular cleavage event (Lee et al., 1994; Porter et al., 1995
; Porter et al., 1996a
). The C terminus possesses a cholesterol transferase activity, and is sufficient to catalyze the covalent addition of a cholesterol moiety to the N-terminal fragment of Hh (Porter et al., 1996b
). Cholesterol modification of Hh is not, however, a pre-condition for generating an active Hh species, as expression of mutant forms of Hh that cannot be modified retain the ability to signal (Porter et al., 1996a
; Burke et al., 1999
). Moreover, the unmodified N-terminal fragment of Drosophila Hh is capable of signaling over an even longer range than its cholesterol modified counterpart (Porter et al., 1996a
; Burke et al., 1999
). By contrast, long-range signaling of Shh appears to require cholesterol modification (Lewis et al., 2001
). Thus, addition of cholesterol appears to be a key factor in regulating the range of Hh signaling.
There is also evidence that Hh proteins bear at least one additional lipid modification. Mass analysis of full-length human Shh expressed in insect cells showed that the total mass of purified Shh could not be accounted for solely by the addition of cholesterol (Pepinsky et al., 1998). This observation suggested that Shh might be fatty acylated. Palmitoylated proteins contain a 16-carbon saturated fatty acyl group that is almost always attached to a cysteine residue by a thioester bond. Pepinsky et al. have observed that the mass of a palmitoyl moity is sufficient to account for the difference between the calculated and measured mass of Shh (Pepinsky et al., 1998
). Direct evidence for palmitic acid modification has come from monitoring the level of radiolabeled palmitic acid incorporation into Shh. While Shh was readily labeled, a variant in which Cys-24 was mutated to Ser-24 showed no palmitic acid incorporation (Pepinsky et al., 1998
). Hence, Cys-24, the N-terminal amino acid of Shh, is specifically required for palmitoylation.
Recent experiments have now begun to address the function of fatty-acylated Hh proteins (Kohtz et al., 2001; Lee et al., 2001
). These studies sought to compare the activity of wild-type Hh with mutant forms of Hh that lacked the N-terminal Cys, in vivo. In one assay, the ability of Shh to induce rat telencephalic neurons was dependent upon the presence of an N-terminal Cys (Kohtz et al., 2001
). Similarly, the activity of Hh in patterning the wing of Drosophila was shown to depend on the presence of an N-terminal Cys (Lee et al., 2001
). Together, these experiments suggest that fatty-acylation is critical for regulating Hh activity in vivo.
We describe the molecular cloning and characterization of rasp, a novel Drosophila segment polarity gene. We demonstrate that the function of rasp is specific for Hh signaling. Furthermore, we show that the requirement for rasp is spatially restricted and limited only to hh-expressing cells. Loss of rasp activity does not disrupt hh transcription, nor does it affect Hh protein levels or distribution. Molecular analysis reveals that rasp encodes a putative multipass transmembrane protein with homology to a conserved family of membrane bound O-acyl transferases (MBOAT) (Hofmann, 2000). We propose that Rasp, like the other members of the MBOAT family, acts as an acyltransferase and is required to fatty-acylate Hh, a modification required for Hh signaling.
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MATERIALS AND METHODS |
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In a genetic screen for maternal/zygotic genes (N. P., C. Arnold and A. Lanjuin, unpublished) we have identified two rasp alleles, rasp7F21 and rasp9B15. These mutations were induced on a y w; FRT2A FRT82B chromosome (Chou and Perrimon, 1996). An additional allele, l(3)63Bg, was subsequently identified in the Bloomington stock center collection by complementation testing. The phenotypes of each or these three mutations were tested over a small deficiency in the region and found to be similar to the homozygous phenotype of each allele alone. Furthermore, the molecular lesion associated with rasp7F21 is consistent with this allele being a protein null, as it introduces a premature stop codon into the predicted protein (see Results). The rasp7F21 and rasp9B15 phenotypes we observe are similar to those previously described for l(3)63Bg (Wohlwill and Bronner, 1991
). In the present analysis, we used rasp7F21 in the generation of marked clones and rasp9B15 to generate discs homozygous for rasp.
Clonal analysis
Germline clones (GLC) were induced using the FLP-FRT dominant female sterile method as previously described (Chou and Perrimon, 1996). Recombinant somatic clones were generated by collecting eggs for 3 days and then administering a 37°C heat shock for 1-2 hours (depending on the intended rate of clone induction). To obtain the cohort of larvae that received a heat shock at the beginning of second instar, white prepupae (wpp) were picked from the bottle 72 hours after clone induction. The wpp were transferred to a moist plastic petri dish and heat shocked at 37°C to induce marker gene expression (1 hour for Myc, 2 hours for GFP). Wpp were immediately dissected and prepared for staining.
Histology and immunohistochemistry
For most antibody stains, discs were dissected in Drosophila ringers and fixed in Browers buffer + 2% EM grade formaldehyde overnight at 4°C (for details, see Blair, 2000). For anti-Hh staining we found that the protocol described by Burke et al. (Burke et al., 1999
) produced the most reliable results. For in situ hybridization to RNA probes, discs were fixed in PBS + 8% formaldehyde and processed according to Hauptmann (Hauptmann, 2001
).
Primary antisera used were: Anti-Hh (gift from Ingham), 1:1000; Anti-Hh (gift from Kornberg), 1:10,000; anti-Ptc (gift from I. Guerrero) 1:1000; anti-Sc (gift from S. Carroll) 1:1000; anti-Dll (gift from S. Cohen), 1:1000; anti-Wg (gift from S. Cohen), 1:10; anti-Myc (gift from S. Blair), 1:4; anti-En/Inv (gift from E. Spana), 1:4; anti-En/Inv (gift from N. Patel), 1:10; anti-ß-gal (Cappell) 1:2000; anti-HA (Roche), 1:1000; anti-Crumbs (gift from E. Knust), 1:50; and anti-Dig-alkaline phosphatase (Roche), 1:2000. Fluorescent secondary antibodies (low cross reactivity from Jackson ImmunoResearch Labs) were used at 1:200 and incubated at 4°C overnight. In some cases, discs were stained using a nickel-intensified Vector ABC-DAB protocol as described by Blair (Blair, 2000). Discs were mounted in Vectashield mounting media and inspected using a Leica TCS-NT confocal microscope. Single images were merged using Adobe Photoshop.
Molecular biology
The ORF corresponding to CG11495 was amplified from genomic DNA by PCR using specific oligonucleotide primers. PCR products were cloned using the Promega pGemTeasy kit. Genomic DNA was prepared according to a modified form of the single fly PCR protocol described by Gloor et al. (Gloor et al., 1993). To identify mutations, DeepVent DNA polymerase (New England Biolabs) was used to amplify CG11495 fragments from both y w; rasp7F21FRT2A FRT82B and y w; FRT2AFRT82B genomic DNA. rasp7F21 homozygous embryos were selected from a y w; rasp7F21FRT2A FRT82B/TM6, GFP stock under a fluorescent dissecting microscope. For each genotype, the PCR products from each of three independent, but identical, reactions were sequenced and compared. DNA star software suite was used for compiling sequences, generating alignments and analyzing predicted protein structure. RNA probes were generated according to Hauptmann (Hauptmann, 2001
).
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RESULTS AND DISCUSSION |
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rasp is not required for Wg signaling
To test the requirement of rasp in Wg and Hh signaling, we analyzed the rasp mutant phenotype in developmental contexts where Wg and Hh signaling are known to be independent. One such context is the development of the embryonic stomatogastric nervous system (SNS). By stage 11, three invaginations of the foregut form in the dorsal epithelium and are easily visualized using the epithelial marker Crumbs. Loss of Wg signaling leads to the formation of only a single invagination, while SNS development is not disrupted in hh mutants (González-Gaitán and Jäckle, 1995). rasp mutant embryos stained with anti-Crumbs showed no defects in SNS formation (data not shown). Thus, Rasp is not required for the Wg-dependent patterning of the SNS.
We next extended our analysis to the wing imaginal disc, where Wg and Hh signaling pathways also have distinct patterning requirements. In the wing, Wg acts over a long range to pattern the dorsoventral (DV) axis of the wing (Zecca et al., 1996; Neumann and Cohen, 1997
), while Hh patterns the AP axis (Basler and Struhl, 1994
; Strigini and Cohen, 1997
). By late third instar, wg is expressed in a narrow stripe three to five cells wide along the presumptive wing margin (Baker, 1988a
). Wg is necessary and sufficient to activate both proneural gene expression (Blair, 1992b
; Phillips and Whittle, 1993
) and Distaless (Dll) expression (Zecca et al., 1996
; Neumann and Cohen, 1996
) within the wing pouch. We used a GFP marked Minute chromosome to generate large rasp clones and examined protein levels of both the proneural gene scute (sc) and Dll (Fig. 2A-F). None of the clones examined resulted in a discernable disruption of either the level or pattern of Sc (Fig. 2A-C) and Dll (Fig. 2D-F) proteins. This was true even for early clones that straddled the DV boundary. Taken together, our data show that rasp is not required for Wg signaling.
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rasp is required in cells that send the Hh signal
Reductions in the level of Hh target gene expression can be observed in mutations that disrupt either the process of sending or receiving Hh. Using clonal analysis, we tested the requirement of rasp for Hh target gene activation in both sending and receiving cells. Large rasp clones that were restricted to the anterior compartment and defined the AP boundary, had no detectable effect on Ptc protein levels (Fig. 5A-C). Anterior En protein levels were also examined in this assay; by late third instar, a Hh-dependent stripe of En expression is present along the AP boundary (Blair, 1992a; Blair and Ralston, 1997
). The level of anterior En protein was similarly unaffected by large anterior rasp clones (Fig. 5G-I). Anterior clones distant from the AP boundary also had no effect on either Ptc or En levels. By contrast, large rasp clones restricted to the posterior compartment resulted in a non-autonomous reduction in the levels of both Ptc and anterior En protein levels (Fig. 5D-F,J-L). These effects were most pronounced in large posterior clones abutting the AP boundary. Posterior rasp clones that were small or distant from the AP boundary did not result in detectable reductions of either Ptc or En protein. Interestingly, we observed that the presence of wild-type posterior tissue adjacent to the AP boundary could often rescue anterior Hh target gene expression, even when the remaining posterior cells were rasp negative (data not shown). Hence, rasp is required only in posterior cells, and is both necessary and sufficient for anterior Hh target gene expression along the AP boundary.
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rasp is required to produce a fully active Hh protein
Activation of anterior Hh target gene expression requires that Hh protein produced by posterior cells is both active and that it is transported to anterior receiving cells. The processes of Hh signaling and transport have been experimentally separated. For example, overexpression of Hh in anterior cells results in the activation of Hh target gene at a distance (Strigini and Cohen, 1997; Burke et al., 1999
), while activation of a membrane-tethered form of Hh results in target gene activation only in adjacent cells (Strigini and Cohen, 1997
; Burke et al., 1999
). Furthermore, mutations in tout-velu disrupt long range Hh transport, but not the responsiveness of anterior cells to Hh (Bellaiche et al., 1998
).
If the function of rasp is required for Hh activity and not for transport, then overexpression of Hh in a rasp mutant background should fail to activate Hh target gene expression. Alternatively, if rasp is required for the transport of Hh, then overexpression of Hh in a rasp mutant background should lead to target gene activation only in adjacent cells. To address this issue, we expressed a full-length, tagged form of Hh (Burke et al., 1999) in posterior cells that were either heterozygous or homozygous for rasp. The heterozygous discs displayed several features that indicated Hh signaling was occurring normally (Fig. 7A-C). First, the discs were the same size and shape as wild-type discs. Second, the AP lineage boundary was straight, as is the case for wild-type disc. Third, anterior domains of en expression and Ptc protein were both detectable. By contrast, discs homozygous for rasp were reduced in size, often displayed a distorted AP boundary and showed no detectable anterior en expression or Ptc protein (Fig. 7D). Careful examination of these discs revealed that anterior Ptc protein was not detectable, even in the cells directly adjacent to Hh-expressing cells (Fig. 7E). We next tested the requirement of rasp for the activity of the hh-N transgene (Porter et al., 1995
). hh-N produces a protein that is truncated at the site of autoproteolysis, and therefore is not modified through the addition of cholesterol. Hh-N is not efficiently sequestered and exhibits the ability to signal over an extended range (Porter et al., 1995
, Burke et al., 1999
). Nevertheless, we find that rasp is required for anterior Ptc expression even in the presence of Hh-N (Fig. 7F). Thus, rasp is required for the production of fully active Hh protein.
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To map the location of rasp more finely, we performed complementation tests with available mutations in the region. We identified one mutation, l(3)63Bg, that failed to complement rasp and had a similar mutant phenotype (Wohlwill and Bronner, 1991). We next measured the recombination rates between rasp and three lethal P-elements in the region, l(3)06803, l(3)j5C2 and l(3)01029. No recombinants between rasp and l(3)j5C2 were recovered in our experiment, suggesting a map position for rasp close to 63B13.
Examination of the information from the Berkeley Drosophila Genome Project (BDGP) revealed the presence of a number of putative open reading frames (ORFs) in the region of 63B13. Furthermore, through personal communication with K. Basler, we became aware that his group was also characterizing a segment polarity gene in the region that failed to complement l(3)63Bg and that corresponded to ORF CG11495, located at 63B11. To determine whether rasp was a mutation underlying CG11495, we compared the genomic sequence of the parental, unmutagenized chromosome used in our screen with the genomic sequence of rasp7F21. We found that rasp7F21 was associated with a C to T base substitution that would introduce a premature stop codon at amino acid 52 of the predicted protein encoded by CG11495 (Fig. 8, asterisk). DNA amplified from CG11495 was cloned and used to generate RNA probes. As predicted, based on the domain of Hh responsiveness, rasp transcripts were detected ubiquitously at low levels throughout the wing imaginal disc (data not shown).
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In this study, we have described the requirement of rasp in patterning the Drosophila embryo and wing imaginal disc. Our results indicate that rasp is required for Hh signaling and that post-translational lipid modification is crucial for long and short range, Hh-dependent patterning. These conclusions are based on the following observations:
(1) We have examined the requirement of rasp for both Wg and Hh signal transduction. Our experiments show that loss of rasp does not alter Wg target gene expression; however, the expression of direct transcriptional targets of Hh signaling are reduced in the absence of rasp.
(2) Using clonal analysis, we have tested the requirement of rasp in Hh-sending and -receiving cells. We observe that loss of rasp in posterior, Hh-sending cells, has a non-autonomous effect on Hh target gene expression, while no requirement for rasp in receiving cells was detected.
(3) hh transcription, protein levels and distribution do not depend on rasp function.
(4) rasp is required for the production of an active Hh protein.
(5) rasp encodes a protein with homology to acyltransferases.
What, then, is the role of Rasp in modifying the Hh protein? One possibility is that Rasp is required directly for the cholesterol modification of Hh, and that rasp mutant cells produce Hh, but that it lacks a cholesterol moity. Elegant studies in Drosophila have examined the role of cholesterol modification for Hh activity. These experiments demonstrate that Hh proteins, which are not cholesterol modified, can still activate Hh target genes, even in the absence of endogenous Hh (Porter et al., 1995; Burke et al., 1999
). This, however, is not consistent with what we observe, as lack of rasp activity leads to a reduction of target gene expression. Therefore, our data do not appear to be consistent with a role for rasp in cholesterol modification.
Members of the MBOAT superfamily that have been well-characterized biochemically encode enzymes that transfer fatty acids onto hydroxyl groups of membrane-tethered targets. Palmitoylation, the attachment of saturated 16-carbon fatty acyl chain to a protein by a thioester bond, is the only other lipid modification of Hh that has been described (Pepinsky et al., 1998). A second possibility, then, is that Rasp is directly required for Hh palmitoylation. Studies of mutant variants in which the N-terminal Cys of Drosophila Hh was mutated, fail to be palmitoylated, and lead to phenotypes very similar to those reported here for rasp (see Introduction). While our study does not directly address this possibility, these observations suggest that Rasp may be required directly for Hh palmitoylation. Interestingly, biochemical analysis suggests that the palmitoyl moiety of Hh may not be attached to the thiol group of the N-terminal Cys, but rather to the
-amino group (Pepinsky et al., 1998
). Thus, if Rasp does palmitoylate Hh, this would constitute a difference in the enzymatic specificity between Rasp and other members of the MBOAT superfamily. Finally, it is possible that Rasp is required for additional lipid modifications that are required for Hh activity, but have yet to be characterized.
Among acylated proteins, there are a growing number that regulate developmental signaling events. Our study has highlighted the importance of lipid modification for Hh signal transduction. Such lipid modifications appear to be important for protein-membrane interactions and for targeting proteins to membrane microdomains (Casey, 1995). Palmitoylation, in particular, has been the subject of increasing interest (Mumby, 1997
; Resh, 1999
). This may be due to the fact that, unlike other lipid modifications, palmitoylation can be reversible and thus, constitutes a regulatable step in signal transduction. Finally, like rasp, porcupine (porc) also encodes a protein with homology to members of the MBOAT superfamily (Hofmann, 2000
); porc is required for sending the Wg/Wnt signal (Kadowaki et al., 1996
). Thus, some acylating enzymes appear to be highly specific, and may prove to be of general importance in regulating the function of secreted proteins during development.
Note added in proof
As we were preparing this manuscript for publication, the molecular and phenotypic analysis of sightless (sit) (Lee and Triesman, 2001) and skinny hedgehog (ski) (Chamoun et al., 2001
) were reported. sit, ski and rasp correspond to the same gene and our findings are in agreement.
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ACKNOWLEDGMENTS |
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