Departments of 1Pediatrics and 3Vascular Surgery, Dartmouth Medical School, Hanover, New Hampshire; 2Department of Microbiology and Immunology, University of Kentucky, Lexington, Kentucky; and 4Department of Environmental and Occupational Health, University of Pittsburgh, Pittsburgh, Pennsylvania
Submitted 5 April 2004 ; accepted in final form 10 November 2004
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ABSTRACT |
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eukaryotic translation initiation factors; protein synthesis; lung; stress granules
In mammalian cells, translation is principally regulated by a family of eukaryotic initiation factors (eIF) that control the assembly of the ribosome on the mRNA. The efficiency of ribosome/mRNA binding is governed by the availability of the 5' m7-GpppX (where X is any nucleotide) mRNA cap binding protein, eIF4E, which, together with eIF4G and eIF4A, comprises the heterotrimeric eIF4F initiation complex (reviewed in Refs. 29 and 34). The eIF4F complex, along with eIF3, facilitates the assembly of the 43S ribosomal subunit on the 5' end of the mRNA. The low abundance of eIF4E relative to the other 4F components renders it rate limiting for eIF4F formation. The level of free eIF4E is regulated by a group of repressor proteins, known as 4E-binding proteins (4E-BP), that serve to exclude eIF4E from the initiation complex by competing for the eIF4G binding site. In turn, the affinity of 4E-BP for eIF4E is diminished through phosphorylation of numerous residues, of which Ser65 appears to be of central importance (10, 24). eIF4E activity is also regulated by its own phosphorylation. The majority of stimuli that enhance translation increases the phosphorylation of eIF4E (reviewed in Ref. 34). Although phosphorylated eIF4E predominates in the eIF4F complex and the inability to phosphorylate eIF4E stunts Drosophila larval development, in vitro analysis indicates that phosphorylation at Ser209 actually reduces cap affinity 10-fold (19, 36). At present, therefore, the precise role of eIF4E phosphorylation in translational regulation remains to be determined.
Initiation is also regulated by the degree of phosphorylation of eIF2. eIF2
is a subunit of eIF2, the factor responsible for bringing the initial Met-tRNA
to the 40S subunit (reviewed in Ref. 11). Phosphorylation of eIF2
converts eIF2 from a substrate to a competitive inhibitor of the guanine-nucleotide exchange factor, eIF2B, and thereby prevents the regeneration of GTP necessary to form eIF2-GTP-tRNA
. This regulatory pathway appears to be particularly relevant to hyperoxia as it is commonly activated by stress conditions including hypoxia, heat shock, and starvation. These stressors trigger the unfolded protein response within the endoplasmic reticulum and induce the formation of discrete cytoplasmic foci of untranslated mRNA, eIFs, and protein, known as stress granules (13). Stress granules have been theorized to represent stalled translation initiation complexes, thereby representing an additional regulatory pathway within initiation (13, 17).
If the initiation phase proceeds unimpeded, translation may still be regulated at the level of peptide chain elongation. The principal regulatory pathway during elongation occurs via the phosphorylation of eEF2 at Ser59. Activation of this site inhibits peptide chain lengthening by blocking peptidyl-tRNA translocation (reviewed in Ref. 4).
Given the paucity of information surrounding hyperoxia-mediated repression of protein synthesis, coupled with our previous report that H2O2 alters the phosphorylation of eIF4E and 4E-BP1 in a lung cancer cell line, we sought to investigate the translation initiation factors that regulate protein synthesis during prolonged hyperoxia in normal lung fibroblasts (32). Our results demonstrate that the hyperoxia-mediated decrements in protein synthesis result from an increase in eIF4E phosphorylation and a reduction in 4E-BP1 phosphorylation.
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MATERIALS AND METHODS |
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Cell culture and conditions. Nontransformed, human lung fibroblasts (passages 410), obtained from a several-month-old infant, were utilized for all experiments (35). Cells were grown in a 1:1 mixture of MEM for cell suspension and Leibowitz L-15 medium supplemented with 10% FBS, 100 IU/ml penicillin, 100 mg/ml streptomycin, and 2 mM glutamine. Cells were allowed to attach overnight, and the following morning, medium was refreshed and plates were divided into room air control (CON) and hyperoxic (OX) groups. Plates in the CON group were returned to the incubator to grow in room air plus 5% CO2, while plates in the OX group were loaded into a humidified, sealed chamber (Billups-Rothenberg, Del Mar, CA) and flushed twice daily for 15 min with a mixture of 95% O2-5% CO2.
Proliferation. Cell number was determined by counting cells on a hemacytometer. Percent viability was assessed via exclusion of 0.4% trypan blue (50:50 vol/vol). Synthesis of DNA was determined by thymidine incorporation in cells incubated with 2 µCi/ml of [3-methyl-3H]thymidine. Cells were labeled with thymidine for the final hour of each 6-h interval during the first 24 h and also for the entirety of each 24-h period. After incubation, monolayers were rinsed with ice-cold PBS before precipitation with 10% trichloroacetic acid for 15 min. Precipitated proteins were then dissolved in 0.5 N NaOH, and the corresponding radioactivity was measured by liquid scintillation counting.
Flow cytometry was used to assess DNA content. The combination of floating and attached cells was rinsed twice with ice-cold PBS and fixed in cold 70% ethanol. After fixation, cells were stained for 30 min with propidium iodine (10 µg/ml) plus RNase A (250 µg/ml). Fixed cells were analyzed within 4 h of staining on a FACscan flow cytometer (Becton-Dickinson, San Jose, CA).
Protein synthesis/content. Protein synthesis was assessed by the incorporation of [4,5-3H]leucine (4 µCi/ml) into cells labeled during the final hour of each 6-h interval during the first 24 h and for the entire 24 h of each 24-h period. Samples were then handled as for thymidine, and counts were normalized to micrograms of protein. Protein concentrations were determined using the colorimetric BCA assay.
Immunoblotting.
Cell monolayers were rinsed with PBS, trypsinized, and counted on a hemacytometer. Duplicate wells were then lysed in buffer A [125 mM Tris·HCl, pH 6.8, 4% SDS, 10% glycerol, 2% 2-mercaptoethanol, 1 mM 4-(2-aminoethyl)benzenesulfonylfluoride-HCl (AEBSF), 0.8 µM aprotinin, 50 µM bestatin, 15 µM E-64, 20 µM leupeptin, and 10 µM pepstatin A (final concentrations)] at a ratio of 2,000 cells/µl. Protein extracts from equal cell numbers were resolved on either 12% or 412% Bis-Tris or 38% Tris-acetate gels. Resolved proteins were transferred to polyvinylidene difluoride (PVDF) membranes and incubated overnight at 4°C with primary antibodies (all at 1:1,000, except -actin at 1:5,000) in blocking buffer. After being rinsed, membranes were incubated with the corresponding horseradish peroxidase-conjugated secondary antibody (1:5,000), and the signal was detected by chemiluminescence. Values were normalized to
-actin expression and listed as change from baseline (time 0) values.
m7-GTP affinity chromatography. To purify eIF4E, monolayers were rinsed with ice-cold PBS and scraped into buffer B (0.1% Nonidet P-40, 10 mM HEPES-KOH, pH 7.9, 10 mM KCl, 0.1 mM EDTA, 0.5 mM DTT, 2 mM MgCl2, 0.5 mM PMSF, 0.5 M sucrose, 1 mM AEBSF, 0.8 µM aprotinin, 50 µM bestatin, 15 µM E-64, 20 µM leupeptin, and 10 µM pepstatin A) in a ratio of 2,000 cells/µl of buffer. After incubation for 10 min on ice, lysates were sonicated on high power (four 5-s cycles) and pelleted at 10,000 g for 10 min. Lysates from equal cell numbers were then added to 25 µl of m7-GTP-Sepharose beads in 250 µl of buffer C (20 mM Tris·HCl, pH 7.4, 0.2 mM EDTA, 100 mM KCl, 1 mM PMSF, and 7 mM 2-mercaptoethanol) and incubated for 2 h at 4°C with agitation. The beads were pelleted and washed three times with buffer C. Thereafter, bound proteins were removed from the beads by being boiled in 20 µl of buffer D (50 mM Tris·HCl, pH 6.8, 100 mM DTT, 2% SDS, 0.1% bromphenol blue, and 10% glycerol). Eluted proteins were then resolved by PAGE using 38% Tris-acetate or 12% Bis-Tris gels. The presence of eIF4G, eIF4E, and 4E-BP1 was subsequently identified by immunoblotting.
Immunofluorescent staining. To assess the effect of hyperoxia on stress granule formation, fibroblasts were grown on plastic slides and exposed to either 95% O2 or room air, and the presence of the stress granules was determined by immunofluorescent microscopy as previously described (14). Briefly, cells were rinsed with PBS and fixed in 2% paraformaldehyde for 10 min. The paraformaldehyde was then removed, and cells were immersed in 100% methanol at 20°C for 10 min. After several rinses in PBS, cells were blocked for 1 h in 5% normal horse serum before overnight incubation with primary antibodies. Monoclonal mouse antibodies were diluted in 2% BSA/PBS at a concentration of 1:150 for both eIF4E and TIA-1. The next morning, cells were washed three times in PBS and incubated with Cy2-conjugated anti-mouse secondary antibody (1:200). Cells were then thoroughly rinsed with PBS, mounted with 30% glycerol, and immediately examined using a Nikon Diaphot-TMD microscope (Tokyo, Japan) equipped with epifluorescence optics and appropriate filters. Digital images were obtained using a QColor3 camera and QCapture software (QImaging, Burnaby, BC, Canada). Incubation of cells with 1 µM thapsigargin for 50 min was used as a positive control for stress granule formation (13). Control studies performed without primary antibodies or secondary antibodies revealed no significant staining with either primary antibody but some nonspecific nuclear staining with Cy2 alone.
Statistics. All studies were performed a minimum of three times. Data were analyzed using either Student's t-tests or repeated-measures analysis of variance with Fisher's least significant differences testing to determine individual differences when appropriate. Data are listed as means ± SE, and the level of significance is set at P < 0.05.
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RESULTS |
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Effect of hyperoxia on protein metabolism. Using a 24-h labeling period, we found that O2 exposure decreased leucine incorporation at 48 and 72 h but not at 24 h (Fig. 1A). Because lengthy labeling periods "dilute" changes in protein synthesis occurring late in the interval and incorporate changes in protein turnover, we shortened both the exposure and labeling periods to examine the final hour of each 6-h interval during the first day. This methodology revealed that hyperoxia did not significantly impact protein synthesis until 1224 h. During the 24th hour, hyperoxia inhibited protein synthesis by 47% (CON: 51 ± 2 vs. OX: 27 ± 2 dpm/µg protein, P < 0.01; Fig. 1B).
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To screen for factors affected early in the course of hyperoxia, we assessed the expression and phosphorylation of regulators of initiation every 6 h during the first 24 h of hyperoxic exposure. Before 12 h, hyperoxia appeared to have no effect on the expression or phosphorylation of eIF4E, eIF2, eEF2, 4E-BP1, or eIF4G. At the time corresponding to the decline in leucine incorporation, however, hyperoxia was associated with increased eIF4E phosphorylation, decreased expression of phosphorylated 4E-BP1 at Ser65, contraction of the phosphorylation bands of 4E-BP1, and no change in the phosphorylation of eEF2 or eIF2
(Fig. 1C). These trends were maintained at 18 h.
Effect of prolonged hyperoxia on eIF, eEF, and 4E-BP1 expression, phosphorylation, and binding.
Beyond 24 h, only the expression of eIF4E protein increased with hyperoxia, although the changes were modest (72 h, CON: 1.53 ± 0.42 vs. OX: 2.71 ± 0.75 arbitrary units, P < 0.05). The early enhancement of eIF4E phosphorylation continued with prolonged O2 exposure, being three- to fivefold greater in the OX cells throughout the 72-h study period. Although unaffected acutely, prolonged exposure enhanced the phosphorylation of eIF2 at Ser51 after 24 h, culminating in a 2.5-fold greater level at 72 h (Fig. 2).
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During prolonged hyperoxia, the expression of 4E-BP1 protein was unaltered by time or hyperoxia. The phosphorylation of 4E-BP1 on multiple sites results in the appearance of three to four distinct bands during electrophoresis, with the more slowly migrating species representing more highly phosphorylated isoforms. In control cells, the distribution of the phosphorylation bands shifted to favor the more highly phosphorylated isoforms at 12 h and beyond, perhaps secondarily to the effect of replenishment with fresh medium (Fig. 1C). By contrast, hyperoxia induced a shift in phosphorylation from the highly phosphorylated -isoform to the lesser phosphorylated
-isoform, an event subtly appearing within 12 h and becoming quantifiable by 24 h (Fig. 3). To further substantiate the apparent decrease in the highly phosphorylated isoforms during hyperoxia, we immunoblotted lysates with an antibody specific to the Ser65 phosphorylation site of 4E-BP1. Phosphorylation at this site has been consistently associated with the release of eIF4E from 4E-BP1 (29, 34). Using this strategy, we found that hyperoxia decreased the expression of the Ser65 phosphorylated isoform beginning at 12 h. By 2472 h, OX cells displayed a 3750% reduction in the expression of the Ser65 phosphorylated isoform compared with control cells and a 30% reduction compared with time 0 (Fig. 4).
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Effect of hyperoxia on stress granule formation. Stress granules represent an additional mechanism regulating translation, whereby formed initiation complexes, along with untranslated mRNA, are shuttled into discrete, cytoplasmic aggregates in response to environmental stress (14). Both RNA-binding proteins [TIA-1, TIAR, poly(A) binding protein-1] and eIFs have been shown to localize to the granules (13). In the current study, TIA-1 and eIF4E immunofluorescence appeared throughout the cytoplasm of the fibroblasts at time 0 (Fig. 5). Upon stimulation with 1 µM thapsigargin, both TIA-1 and eIF4E accumulated into punctate loci within the cytoplasm, a process consistent with stress granule formation (14). In fibroblasts exposed to hyperoxia from 1272 h, the cytoplasmic distribution of TIA-1 appeared more granular than at baseline, yet stress granules were clearly absent. Likewise, the distribution of eIF4E appeared unaltered by hyperoxia. Nonetheless, upon stimulation with thapsigargin, OX cells readily formed stress granules, indicating that the lack of granule formation during hyperoxia was not secondary to a fundamental inability of the cells to form these aggregates.
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DISCUSSION |
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Translational control is principally exerted by regulating the integrity of the cap-dependent translation initiation complex. Of the components of the eIF4F complex, eIF4E is considered rate limiting owing to its low abundance relative to eIF4G and eIF4A (reviewed in Ref. 34). The availability of "free" eIF4E is generally regulated by inhibitory 4E-BP, which competes with eIF4G for eIF4E binding. During exposure to hyperoxia, we found an acute reduction in 4E-BP1 phosphorylation, illustrated by the shift from the highly phosphorylated -isoforms to the non- or lesser-phosphorylated
-isoforms and by the reduction in Ser65 phosphorylation. These changes continued for 3 days and correlated with an increase in the proportion of eIF4E associated with 4E-BP1 during that time. Although the diminished 4E-BP1 phosphorylation may signify reductions in specific kinase or phosphatase activities, it may also reflect the observed alterations in cell cycle distribution. Heesom et al. (10) recently reported that bound eIF4E dissociates from 4E-BP1 during mitosis and remains free throughout G1-phase, an event that correlates with the phosphorylation of 4E-BP1 at Ser65. Because only 25% of our hyperoxia-treated cells remained in G1-phase, alterations in the amount of 4E-BP1 associated with eIF4E could simply be a manifestation of the prolonged cell cycle transit time. This would appear unlikely given that inhibition of DNA synthesis occurs by 6 h, a time when alterations in protein synthesis and 4E-BP1 phosphorylation have yet to occur.
Aside from 4E-BP1 binding, the activity of eIF4E is also regulated by eIF4E expression and phosphorylation. Altered expression of eIF4E is a common finding in malignancies of the lung and colon but has not been routinely identified in noncancerous conditions (3, 31). Thus we were surprised to find that hyperoxia increased eIF4E protein expression in both nonpurified cell lysates and m7-GTP-purified lysates. Whereas downregulation of eIF4E protein has been reported in response to TNF-, cortisone, and ischemia, only mammary gland development appears to enhance eIF4E expression under physiological conditions (5, 8, 21). Nonetheless, given that hyperoxia enhances activator protein (AP)-1 transcription, it is conceivable that binding of AP-1 to the AP-1 motifs in the eIF4E gene could upregulate eIF4E expression (20, 22).
In conjunction with the enhanced expression of eIF4E, we found that hyperoxia induced a fourfold increase in eIF4E phosphorylation at Ser209. Previous studies have shown that H2O2 and oxidized low-density lipoprotein potently phosphorylate eIF4E (6, 27, 32). Phosphorylation of eIF4E is mediated by activation of MAPK interacting kinases 1 and 2 (MNK-1 and -2). These eIF4E kinases lie downstream of hyperoxia-inducible signaling pathways containing ERK1/2 and p38 MAPK (18). Early reports indicated that eIF4E phosphorylation coincided with the formation of stable eIF4F complexes and with greater affinity of eIF4E for the 5' cap. This view integrated nicely with crystalline structure data illustrating that the phosphorylation of eIF4E at Ser209 would produce a salt bridge with Lys159 to form a functional "clamp" on the mRNA (reviewed in Ref. 34). More recently, however, reports have found both enhanced eIF4E phosphorylation in the absence of increased translation and a fourfold reduction in cap affinity by phosphorylation of eIF4E on Ser209 (30, 36). It is conceivable, therefore, that hyperoxia-mediated increases in eIF4E phosphorylation actually inhibit, rather than promote, translation initiation, as has been demonstrated recently using a low-molecular-weight MNK-1 inhibitor and constitutively active mutants of MNK-1 and -2 (18).
Although the enhanced sequestration of eIF4E by 4E-BP1 and the increased phosphorylation of eIF4E are consistent with the reduction in eIF4F complex formation at 24 h, they do not provide a basis for the reduction in protein synthesis thereafter, given the normalization of eIF4E:eIF4G binding. Similar changes in protein synthesis could occur from the increased phosphorylation of eIF2, the competitive inhibitor of eIF2B. Both H2O2 and nitric oxide have been shown to increase eIF2
phosphorylation and to block protein synthesis (1, 16). Several kinases phosphorylate eIF2
at Ser51 in response to stress and induce the formation of stress granules, cytoplasmic domains of RNA, and proteins (13, 17). In addition to mRNA, stress granules contain 40S ribosomal subunits, eIF4E, eIF4G, eIF3, poly(A) binding protein, the RNA binding proteins TIA-1 and TIAR, and eIF2
itself (13, 17). As eIF4E:eIF4G binding and the formation of the 48S preinitiation complex precedes Met-tRNA
binding, enhanced phosphorylation of eIF2
would be expected to stall initiation by inhibiting the activity of eIF2B (17). Under these circumstances, eIF4E:eIF4G binding could be maintained or even enhanced in the face of reduced initiation.
Although the spectrum of alterations in eIF expression and phosphorylation found in the present study fit well into the stress granule model, we were unable to detect stress granules during hyperoxia using TIA-1 and eIF4E as markers (13, 17). Despite this, the fundamental capacity of the cells to form stress granules was maintained, as indicated by the continued response to thapsigargin. These findings suggest that hyperoxia, unlike thapsigargin and ischemia/reperfusion, increases eIF2 phosphorylation through a nonpancreatic endoplasmic reticulum eIF2
kinase-dependent pathway (9, 13). Given that nonphosphorylatable eIF2
mutants ablate stress-induced inhibition of protein synthesis, it would seem improbable that eIF2
phosphorylation does not decrease eIF2B activity (25). Still, measurement of the activities of the specific eIF2
kinases, in addition to that of eIF2B, will be required to determine whether hyperoxia inhibits protein synthesis by an eIF2
-dependent mechanism analogous to the unfolded protein response (13).
In conclusion, the data presented in this study suggest that the regulation of protein synthesis during hyperoxia is complex, involving decreases in 4E-BP1 phosphorylation and the sequestration of eIF4E, increases in the phosphorylation of eIF4E, and possibly the increased phosphorylation of eIF2. Unresolved issues surrounding eIF2B activity and elongation factors lend caution to the overall interpretation that inhibition of protein synthesis occurs exclusively by these mechanisms. Future studies utilizing isolated eIF and reticulocyte lysates, in conjunction with polysome profiling and eIF4E binding assays, are required to firmly delineate the role of initiation in the inhibition of translation by hyperoxia.
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GRANTS |
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FOOTNOTES |
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The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
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REFERENCES |
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